EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSONIG00000008176 (Gene tree)
Gene ID
100711380
Gene Symbol
pabpc4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Oreochromis_niloticus
Status
putative
Strand
Minus strand
Length
9789 bases
Position
chrGL831177.1:3378585-3388373
Accession
100711380
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSONIP00000010293PABPPF00658.184.8e-3111
ENSONIP00000010293RRM_5PF13893.66.1e-0911
ENSONIP00000010293RRM_1PF00076.224.2e-9014
ENSONIP00000010293RRM_1PF00076.224.2e-9024
ENSONIP00000010293RRM_1PF00076.224.2e-9034
ENSONIP00000010293RRM_1PF00076.224.2e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSONIT00000010302-2406-ENSONIP00000010293627 (aa)XP_003446228I3JN49
Gene Model
Click here to download ENSONIG00000008176's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000008176's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSONIG00000008176pabpc49766.983ENSONIG00000017314pabpc1l9966.299
ENSONIG00000008176pabpc45337.500ENSONIG00000008300celf15537.500
ENSONIG00000008176pabpc45632.051ENSONIG00000001450rbm459532.051
ENSONIG00000008176pabpc45936.145ENSONIG00000007552ELAVL29136.145
ENSONIG00000008176pabpc49876.752ENSONIG00000006871-9876.592
ENSONIG00000008176pabpc45237.500ENSONIG00000017931-5238.372
ENSONIG00000008176pabpc49976.656ENSONIG00000002717pabpc1b9976.667
ENSONIG00000008176pabpc45330.719ENSONIG00000004715trnau1apa7430.719
ENSONIG00000008176pabpc46034.940ENSONIG00000002360elavl48634.940
ENSONIG00000008176pabpc46033.981ENSONIG00000019162rbms2a5733.981
ENSONIG00000008176pabpc45936.145ENSONIG00000001538elavl38936.145
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSONIG00000008176pabpc410085.032ENSG00000090621PABPC49996.396Homo_sapiens
ENSONIG00000008176pabpc49996.926ENSAPOG00000001161pabpc410096.651Acanthochromis_polyacanthus
ENSONIG00000008176pabpc49749.755ENSAMEG00000015083-9849.103Ailuropoda_melanoleuca
ENSONIG00000008176pabpc410080.269ENSAMEG00000011535-10079.671Ailuropoda_melanoleuca
ENSONIG00000008176pabpc410097.785ENSACIG00000023343pabpc410097.785Amphilophus_citrinellus
ENSONIG00000008176pabpc410096.491ENSAOCG00000021529pabpc410096.491Amphiprion_ocellaris
ENSONIG00000008176pabpc410096.491ENSAPEG00000019196pabpc410096.491Amphiprion_percula
ENSONIG00000008176pabpc410096.975ENSATEG00000007402pabpc410096.975Anabas_testudineus
ENSONIG00000008176pabpc49985.512ENSAPLG00000009729-10084.882Anas_platyrhynchos
ENSONIG00000008176pabpc49884.929ENSACAG00000002544PABPC410084.220Anolis_carolinensis
ENSONIG00000008176pabpc410083.750ENSANAG00000025079PABPC410083.125Aotus_nancymaae
ENSONIG00000008176pabpc410099.522ENSACLG00000019558pabpc410099.522Astatotilapia_calliptera
ENSONIG00000008176pabpc49987.005ENSAMXG00000018779pabpc49987.005Astyanax_mexicanus
ENSONIG00000008176pabpc410081.804ENSBTAG00000017125PABPC410081.498Bos_taurus
ENSONIG00000008176pabpc45884.431ENSBTAG00000048536-9384.431Bos_taurus
ENSONIG00000008176pabpc410083.750ENSCJAG00000002512-10083.125Callithrix_jacchus
ENSONIG00000008176pabpc47974.609ENSCJAG00000045953-9773.047Callithrix_jacchus
ENSONIG00000008176pabpc410083.906ENSCAFG00000003081PABPC410083.281Canis_familiaris
ENSONIG00000008176pabpc410080.419ENSCAFG00020004161PABPC410079.821Canis_lupus_dingo
ENSONIG00000008176pabpc410065.586ENSCHIG00000023385-10065.123Capra_hircus
ENSONIG00000008176pabpc410079.821ENSCHIG00000019398-10079.522Capra_hircus
ENSONIG00000008176pabpc410083.906ENSTSYG00000006532PABPC410083.281Carlito_syrichta
ENSONIG00000008176pabpc49983.387ENSCAPG00000015984PABPC410082.616Cavia_aperea
ENSONIG00000008176pabpc410083.333ENSCPOG00000009552PABPC410083.281Cavia_porcellus
ENSONIG00000008176pabpc410083.594ENSCCAG00000037306PABPC410082.969Cebus_capucinus
ENSONIG00000008176pabpc410083.906ENSCATG00000042164PABPC410083.281Cercocebus_atys
ENSONIG00000008176pabpc410082.636ENSCLAG00000011899PABPC410083.438Chinchilla_lanigera
ENSONIG00000008176pabpc410079.970ENSCSAG00000001135PABPC410079.671Chlorocebus_sabaeus
ENSONIG00000008176pabpc48789.737ENSCHOG00000005327PABPC47990.296Choloepus_hoffmanni
ENSONIG00000008176pabpc49986.299ENSCPBG00000001038PABPC410085.669Chrysemys_picta_bellii
ENSONIG00000008176pabpc49984.152ENSCANG00000034177PABPC410083.518Colobus_angolensis_palliatus
ENSONIG00000008176pabpc49885.528ENSCGRG00001018166Pabpc410084.554Cricetulus_griseus_chok1gshd
ENSONIG00000008176pabpc49785.809ENSCGRG00000009777Pabpc410084.814Cricetulus_griseus_crigri
ENSONIG00000008176pabpc410095.694ENSCSEG00000000130pabpc410095.694Cynoglossus_semilaevis
ENSONIG00000008176pabpc49996.266ENSCVAG00000019246pabpc410096.266Cyprinodon_variegatus
ENSONIG00000008176pabpc49892.982ENSDARG00000059259pabpc410092.727Danio_rerio
ENSONIG00000008176pabpc49982.953ENSDNOG00000018444-10082.250Dasypus_novemcinctus
ENSONIG00000008176pabpc410082.236ENSDORG00000011581Pabpc410081.623Dipodomys_ordii
ENSONIG00000008176pabpc410090.625ENSETEG00000018453-8490.625Echinops_telfairi
ENSONIG00000008176pabpc48554.495ENSETEG00000009172-9953.597Echinops_telfairi
ENSONIG00000008176pabpc49876.555ENSEBUG00000000992pabpc49976.236Eptatretus_burgeri
ENSONIG00000008176pabpc49677.236ENSEBUG00000013782pabpc49977.083Eptatretus_burgeri
ENSONIG00000008176pabpc410079.970ENSEASG00005014119PABPC410079.671Equus_asinus_asinus
ENSONIG00000008176pabpc410079.970ENSECAG00000009396PABPC410079.671Equus_caballus
ENSONIG00000008176pabpc49778.681ENSEEUG00000002962PABPC410078.027Erinaceus_europaeus
ENSONIG00000008176pabpc49892.834ENSELUG00000003195pabpc410092.019Esox_lucius
ENSONIG00000008176pabpc410083.906ENSFCAG00000015254-10083.281Felis_catus
ENSONIG00000008176pabpc49985.423ENSFALG00000000543PABPC410085.647Ficedula_albicollis
ENSONIG00000008176pabpc410080.120ENSFDAG00000020016-10079.522Fukomys_damarensis
ENSONIG00000008176pabpc48852.442ENSFDAG00000010581-9950.172Fukomys_damarensis
ENSONIG00000008176pabpc49996.326ENSFHEG00000007548pabpc410096.326Fundulus_heteroclitus
ENSONIG00000008176pabpc410091.066ENSGMOG00000019025pabpc410091.066Gadus_morhua
ENSONIG00000008176pabpc49986.299ENSGALG00000003800PABPC410085.669Gallus_gallus
ENSONIG00000008176pabpc49998.086ENSGAFG00000018195pabpc410098.086Gambusia_affinis
ENSONIG00000008176pabpc410094.099ENSGACG00000007179pabpc410094.099Gasterosteus_aculeatus
ENSONIG00000008176pabpc49986.457ENSGAGG00000001888PABPC410085.827Gopherus_agassizii
ENSONIG00000008176pabpc410083.750ENSGGOG00000004002PABPC410083.125Gorilla_gorilla
ENSONIG00000008176pabpc410099.362ENSHBUG00000020206pabpc410099.362Haplochromis_burtoni
ENSONIG00000008176pabpc410082.636ENSHGLG00000011162PABPC410083.125Heterocephalus_glaber_female
ENSONIG00000008176pabpc410082.636ENSHGLG00100001580PABPC410083.125Heterocephalus_glaber_male
ENSONIG00000008176pabpc410095.056ENSHCOG00000012694pabpc410095.853Hippocampus_comes
ENSONIG00000008176pabpc49792.742ENSIPUG00000016620pabpc410091.956Ictalurus_punctatus
ENSONIG00000008176pabpc410085.032ENSSTOG00000010416PABPC410084.395Ictidomys_tridecemlineatus
ENSONIG00000008176pabpc410080.828ENSJJAG00000007781Pabpc410080.398Jaculus_jaculus
ENSONIG00000008176pabpc410095.541ENSKMAG00000013597pabpc410095.541Kryptolebias_marmoratus
ENSONIG00000008176pabpc410095.397ENSLBEG00000013654pabpc410095.397Labrus_bergylta
ENSONIG00000008176pabpc49987.107ENSLACG00000011907PABPC410086.635Latimeria_chalumnae
ENSONIG00000008176pabpc49991.969ENSLOCG00000001877pabpc410091.969Lepisosteus_oculatus
ENSONIG00000008176pabpc410085.350ENSLAFG00000000151PABPC410084.713Loxodonta_africana
ENSONIG00000008176pabpc410083.906ENSMFAG00000041481PABPC410083.281Macaca_fascicularis
ENSONIG00000008176pabpc410079.970ENSMMUG00000007497PABPC410079.671Macaca_mulatta
ENSONIG00000008176pabpc410083.906ENSMNEG00000043054PABPC410083.281Macaca_nemestrina
ENSONIG00000008176pabpc410083.906ENSMLEG00000040716PABPC410083.281Mandrillus_leucophaeus
ENSONIG00000008176pabpc410097.129ENSMAMG00000010025pabpc410097.129Mastacembelus_armatus
ENSONIG00000008176pabpc410099.362ENSMZEG00005006141pabpc410099.362Maylandia_zebra
ENSONIG00000008176pabpc49883.446ENSMGAG00000005408PABPC410082.770Meleagris_gallopavo
ENSONIG00000008176pabpc47279.524ENSMAUG00000001295-9778.571Mesocricetus_auratus
ENSONIG00000008176pabpc45880.117ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSONIG00000008176pabpc47790.625ENSMAUG00000019763-8487.156Mesocricetus_auratus
ENSONIG00000008176pabpc48884.685ENSMICG00000016633-10084.505Microcebus_murinus
ENSONIG00000008176pabpc49975.179ENSMICG00000036729-10074.107Microcebus_murinus
ENSONIG00000008176pabpc410084.127ENSMOCG00000006763Pabpc410083.594Microtus_ochrogaster
ENSONIG00000008176pabpc410092.504ENSMMOG00000002363pabpc410091.125Mola_mola
ENSONIG00000008176pabpc46071.733ENSMODG00000018051-9671.733Monodelphis_domestica
ENSONIG00000008176pabpc49783.975ENSMODG00000017657-10082.753Monodelphis_domestica
ENSONIG00000008176pabpc410096.979ENSMALG00000011017pabpc410096.979Monopterus_albus
ENSONIG00000008176pabpc49970.748MGP_CAROLIEiJ_G0024864-10073.063Mus_caroli
ENSONIG00000008176pabpc410079.522MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSONIG00000008176pabpc410084.713ENSMUSG00000011257Pabpc410094.643Mus_musculus
ENSONIG00000008176pabpc49980.000MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSONIG00000008176pabpc49970.588MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSONIG00000008176pabpc410079.970ENSMPUG00000014414-10079.671Mustela_putorius_furo
ENSONIG00000008176pabpc49546.370ENSMPUG00000006836-10045.875Mustela_putorius_furo
ENSONIG00000008176pabpc410084.873ENSMLUG00000012068PABPC410084.236Myotis_lucifugus
ENSONIG00000008176pabpc410085.350ENSNGAG00000018292Pabpc410084.713Nannospalax_galili
ENSONIG00000008176pabpc46099.519ENSNBRG00000009708pabpc49899.519Neolamprologus_brichardi
ENSONIG00000008176pabpc46598.795ENSNBRG00000010047-7298.795Neolamprologus_brichardi
ENSONIG00000008176pabpc410083.906ENSNLEG00000011928PABPC410083.281Nomascus_leucogenys
ENSONIG00000008176pabpc48593.651ENSOPRG00000011984PABPC48693.651Ochotona_princeps
ENSONIG00000008176pabpc45382.857ENSODEG00000013457-10082.857Octodon_degus
ENSONIG00000008176pabpc410082.995ENSODEG00000006592-10082.812Octodon_degus
ENSONIG00000008176pabpc49974.327ENSODEG00000017434-10073.706Octodon_degus
ENSONIG00000008176pabpc49985.827ENSOANG00000010001PABPC410085.197Ornithorhynchus_anatinus
ENSONIG00000008176pabpc49580.377ENSOCUG00000000562PABPC48880.063Oryctolagus_cuniculus
ENSONIG00000008176pabpc49997.222ENSORLG00000017479pabpc49997.222Oryzias_latipes
ENSONIG00000008176pabpc49997.222ENSORLG00020018644pabpc410097.222Oryzias_latipes_hni
ENSONIG00000008176pabpc49997.222ENSORLG00015015042pabpc410097.222Oryzias_latipes_hsok
ENSONIG00000008176pabpc49995.793ENSOMEG00000014410pabpc410095.541Oryzias_melastigma
ENSONIG00000008176pabpc410081.402ENSOGAG00000004067PABPC410081.098Otolemur_garnettii
ENSONIG00000008176pabpc410079.821ENSOARG00000020060PABPC410079.522Ovis_aries
ENSONIG00000008176pabpc410083.750ENSPPAG00000043625PABPC410083.125Pan_paniscus
ENSONIG00000008176pabpc410083.906ENSPPRG00000024727PABPC410083.281Panthera_pardus
ENSONIG00000008176pabpc410083.906ENSPTIG00000005829PABPC410083.281Panthera_tigris_altaica
ENSONIG00000008176pabpc410083.750ENSPTRG00000000573PABPC410083.125Pan_troglodytes
ENSONIG00000008176pabpc410083.906ENSPANG00000009484PABPC410083.281Papio_anubis
ENSONIG00000008176pabpc410090.596ENSPKIG00000025356pabpc410090.596Paramormyrops_kingsleyae
ENSONIG00000008176pabpc49986.614ENSPSIG00000016892PABPC410085.984Pelodiscus_sinensis
ENSONIG00000008176pabpc410092.026ENSPMGG00000009073pabpc410091.388Periophthalmus_magnuspinnatus
ENSONIG00000008176pabpc410082.481ENSPEMG00000023569-10083.438Peromyscus_maniculatus_bairdii
ENSONIG00000008176pabpc410079.294ENSPEMG00000024193-10079.969Peromyscus_maniculatus_bairdii
ENSONIG00000008176pabpc48875.087ENSPMAG00000002836pabpc410075.958Petromyzon_marinus
ENSONIG00000008176pabpc49574.580ENSPMAG00000007885pabpc410073.931Petromyzon_marinus
ENSONIG00000008176pabpc49294.299ENSPCIG00000020674PABPC410094.903Phascolarctos_cinereus
ENSONIG00000008176pabpc49995.847ENSPFOG00000002682pabpc410095.847Poecilia_formosa
ENSONIG00000008176pabpc49995.847ENSPLAG00000010112pabpc410095.847Poecilia_latipinna
ENSONIG00000008176pabpc49995.847ENSPMEG00000019739pabpc410095.847Poecilia_mexicana
ENSONIG00000008176pabpc49996.166ENSPREG00000001589pabpc410096.166Poecilia_reticulata
ENSONIG00000008176pabpc410079.821ENSPPYG00000001506PABPC410079.522Pongo_abelii
ENSONIG00000008176pabpc410075.187ENSPCAG00000003341PABPC410074.888Procavia_capensis
ENSONIG00000008176pabpc410082.353ENSPCOG00000023725-10083.151Propithecus_coquereli
ENSONIG00000008176pabpc49969.676ENSPCOG00000025882-9581.905Propithecus_coquereli
ENSONIG00000008176pabpc49879.139ENSPVAG00000002187PABPC410078.477Pteropus_vampyrus
ENSONIG00000008176pabpc410099.522ENSPNYG00000006134pabpc410099.522Pundamilia_nyererei
ENSONIG00000008176pabpc49993.978ENSPNAG00000024355pabpc410093.978Pygocentrus_nattereri
ENSONIG00000008176pabpc410082.083ENSRNOG00000015642Pabpc410081.470Rattus_norvegicus
ENSONIG00000008176pabpc410079.939ENSRNOG00000028592AABR07035074.110079.326Rattus_norvegicus
ENSONIG00000008176pabpc410083.906ENSRBIG00000039761PABPC410083.281Rhinopithecus_bieti
ENSONIG00000008176pabpc410083.906ENSRROG00000033355PABPC410083.281Rhinopithecus_roxellana
ENSONIG00000008176pabpc410083.594ENSSBOG00000026193PABPC410082.969Saimiri_boliviensis_boliviensis
ENSONIG00000008176pabpc49786.998ENSSHAG00000018139PABPC410085.669Sarcophilus_harrisii
ENSONIG00000008176pabpc49991.176ENSSFOG00015023514pabpc410091.176Scleropages_formosus
ENSONIG00000008176pabpc410095.534ENSSMAG00000009007pabpc410095.534Scophthalmus_maximus
ENSONIG00000008176pabpc49996.440ENSSDUG00000012683pabpc410096.172Seriola_dumerili
ENSONIG00000008176pabpc49996.440ENSSLDG00000013025pabpc410096.172Seriola_lalandi_dorsalis
ENSONIG00000008176pabpc410073.692ENSSARG00000000310PABPC410073.543Sorex_araneus
ENSONIG00000008176pabpc49986.963ENSSPUG00000003204PABPC410086.328Sphenodon_punctatus
ENSONIG00000008176pabpc410096.491ENSSPAG00000009252pabpc410096.491Stegastes_partitus
ENSONIG00000008176pabpc410083.906ENSSSCG00000003660-10083.281Sus_scrofa
ENSONIG00000008176pabpc48945.390ENSSSCG00000036170-9645.390Sus_scrofa
ENSONIG00000008176pabpc49981.353ENSTGUG00000001266PABPC410081.654Taeniopygia_guttata
ENSONIG00000008176pabpc410094.418ENSTRUG00000005907pabpc410094.418Takifugu_rubripes
ENSONIG00000008176pabpc410088.038ENSTNIG00000016902pabpc410087.560Tetraodon_nigroviridis
ENSONIG00000008176pabpc49968.709ENSTBEG00000009035PABPC410068.377Tupaia_belangeri
ENSONIG00000008176pabpc49959.019ENSTTRG00000014340PABPC410067.715Tursiops_truncatus
ENSONIG00000008176pabpc410083.906ENSUAMG00000000303PABPC410083.281Ursus_americanus
ENSONIG00000008176pabpc410087.783ENSUMAG00000019585PABPC410092.048Ursus_maritimus
ENSONIG00000008176pabpc47170.796ENSVPAG00000010041PABPC47370.796Vicugna_pacos
ENSONIG00000008176pabpc410083.906ENSVVUG00000005215PABPC410083.281Vulpes_vulpes
ENSONIG00000008176pabpc49982.835ENSXETG00000010946pabpc410082.205Xenopus_tropicalis
ENSONIG00000008176pabpc46796.429ENSXETG00000027221-10096.429Xenopus_tropicalis
ENSONIG00000008176pabpc49997.625ENSXCOG00000013190pabpc49696.698Xiphophorus_couchianus
ENSONIG00000008176pabpc49996.166ENSXMAG00000019007pabpc410096.166Xiphophorus_maculatus

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