EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSONIG00000008196 (Gene tree)
Gene ID
-
Gene Symbol
smarca4a
Alias
-
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Oreochromis_niloticus
Status
putative
Strand
Plus strand
Length
16612 bases
Position
chrGL831154.1:1010541-1027152
Accession
100708694
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSONIP00000010319ResIIIPF04851.155.3e-0911
ENSONIP00000010318ResIIIPF04851.155.4e-0911
ENSONIP00000010319BRKPF07533.164.7e-1711
ENSONIP00000010318BRKPF07533.164.8e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSONIT00000010328-4818-ENSONIP000000103191605 (aa)-I3JN75
ENSONIT00000010327-6207-ENSONIP000000103181628 (aa)XP_025762538I3JN74
Gene Model
Click here to download ENSONIG00000008196's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000008196's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSONIG00000008196smarca4a9972.581ENSONIG00000014163SMARCA29473.019
ENSONIG00000008196smarca4a10085.457ENSONIG00000018040-9984.163
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSONIG00000008196smarca4a10088.409ENSG00000127616SMARCA49995.652Homo_sapiens
ENSONIG00000008196smarca4a7793.419ENSAPOG00000003509smarca4a9890.887Acanthochromis_polyacanthus
ENSONIG00000008196smarca4a9584.635ENSAPOG00000004542SMARCA49986.032Acanthochromis_polyacanthus
ENSONIG00000008196smarca4a10084.264ENSAMEG00000010868SMARCA410084.067Ailuropoda_melanoleuca
ENSONIG00000008196smarca4a9586.182ENSACIG00000003035-9786.706Amphilophus_citrinellus
ENSONIG00000008196smarca4a9997.659ENSACIG00000021550smarca4a9997.659Amphilophus_citrinellus
ENSONIG00000008196smarca4a9487.855ENSAOCG00000009450-9788.193Amphiprion_ocellaris
ENSONIG00000008196smarca4a9092.936ENSAOCG00000019167smarca4a10093.616Amphiprion_ocellaris
ENSONIG00000008196smarca4a10084.095ENSAPEG00000023108-9983.474Amphiprion_percula
ENSONIG00000008196smarca4a9093.004ENSAPEG00000015559smarca4a10093.685Amphiprion_percula
ENSONIG00000008196smarca4a9985.314ENSATEG00000001094-9885.610Anabas_testudineus
ENSONIG00000008196smarca4a10094.969ENSATEG00000011524smarca4a10095.521Anabas_testudineus
ENSONIG00000008196smarca4a9988.092ENSANAG00000036991SMARCA410085.233Aotus_nancymaae
ENSONIG00000008196smarca4a9998.378ENSACLG00000000163smarca4a9998.378Astatotilapia_calliptera
ENSONIG00000008196smarca4a9585.374ENSACLG00000008638-9885.612Astatotilapia_calliptera
ENSONIG00000008196smarca4a9887.142ENSAMXG00000021023smarca4a9887.348Astyanax_mexicanus
ENSONIG00000008196smarca4a9487.908ENSAMXG00000011238-9488.215Astyanax_mexicanus
ENSONIG00000008196smarca4a10088.903ENSBTAG00000019220SMARCA49888.620Bos_taurus
ENSONIG00000008196smarca4a10084.242ENSCJAG00000005936SMARCA410084.401Callithrix_jacchus
ENSONIG00000008196smarca4a10088.279ENSCAFG00000017584SMARCA410088.326Canis_familiaris
ENSONIG00000008196smarca4a10088.279ENSCAFG00020024620SMARCA49988.326Canis_lupus_dingo
ENSONIG00000008196smarca4a10085.077ENSCHIG00000015318SMARCA49884.698Capra_hircus
ENSONIG00000008196smarca4a10088.593ENSTSYG00000012966SMARCA410088.641Carlito_syrichta
ENSONIG00000008196smarca4a9482.216ENSCAPG00000015932SMARCA49489.965Cavia_aperea
ENSONIG00000008196smarca4a10088.163ENSCPOG00000015549SMARCA410088.326Cavia_porcellus
ENSONIG00000008196smarca4a10085.101ENSCCAG00000031660SMARCA49985.153Cebus_capucinus
ENSONIG00000008196smarca4a10088.355ENSCATG00000029530SMARCA410088.341Cercocebus_atys
ENSONIG00000008196smarca4a10088.407ENSCLAG00000011946SMARCA410088.696Chinchilla_lanigera
ENSONIG00000008196smarca4a10088.203ENSCPBG00000009994SMARCA410087.941Chrysemys_picta_bellii
ENSONIG00000008196smarca4a10088.293ENSCANG00000036013SMARCA410088.341Colobus_angolensis_palliatus
ENSONIG00000008196smarca4a10088.047ENSCGRG00001016732Smarca410088.203Cricetulus_griseus_chok1gshd
ENSONIG00000008196smarca4a10088.047ENSCGRG00000017242Smarca410088.203Cricetulus_griseus_crigri
ENSONIG00000008196smarca4a9694.476ENSCSEG00000014771smarca4a10094.672Cynoglossus_semilaevis
ENSONIG00000008196smarca4a9985.499ENSCVAG00000003018-9885.750Cyprinodon_variegatus
ENSONIG00000008196smarca4a9993.979ENSCVAG00000006979smarca4a9994.103Cyprinodon_variegatus
ENSONIG00000008196smarca4a9284.897ENSDARG00000104339SMARCA49484.698Danio_rerio
ENSONIG00000008196smarca4a10089.823ENSDARG00000077226smarca4a10089.731Danio_rerio
ENSONIG00000008196smarca4a10079.954ENSDNOG00000048847SMARCA49091.106Dasypus_novemcinctus
ENSONIG00000008196smarca4a8483.260ENSDORG00000002544Smarca49481.037Dipodomys_ordii
ENSONIG00000008196smarca4a9477.634ENSETEG00000013361SMARCA49476.893Echinops_telfairi
ENSONIG00000008196smarca4a10087.978ENSEASG00005006167SMARCA410086.460Equus_asinus_asinus
ENSONIG00000008196smarca4a10088.039ENSECAG00000008334SMARCA410088.203Equus_caballus
ENSONIG00000008196smarca4a10090.655ENSELUG00000010247smarca4a10090.049Esox_lucius
ENSONIG00000008196smarca4a9979.057ENSELUG00000023232-9779.427Esox_lucius
ENSONIG00000008196smarca4a10088.239ENSFCAG00000004894SMARCA410088.224Felis_catus
ENSONIG00000008196smarca4a7491.275ENSFALG00000004208SMARCA49286.026Ficedula_albicollis
ENSONIG00000008196smarca4a9288.223ENSFDAG00000012237SMARCA49788.402Fukomys_damarensis
ENSONIG00000008196smarca4a10085.356ENSFHEG00000007902-9885.562Fundulus_heteroclitus
ENSONIG00000008196smarca4a9692.767ENSFHEG00000010182smarca4a10092.961Fundulus_heteroclitus
ENSONIG00000008196smarca4a9080.944ENSGMOG00000005756-9080.241Gadus_morhua
ENSONIG00000008196smarca4a9390.184ENSGMOG00000002649smarca4a9490.774Gadus_morhua
ENSONIG00000008196smarca4a7387.764ENSGALG00000047145SMARCA410087.468Gallus_gallus
ENSONIG00000008196smarca4a9983.239ENSGAFG00000008827-9883.040Gambusia_affinis
ENSONIG00000008196smarca4a9093.444ENSGAFG00000014900smarca4a9993.531Gambusia_affinis
ENSONIG00000008196smarca4a9893.805ENSGACG00000006691smarca4a10092.237Gasterosteus_aculeatus
ENSONIG00000008196smarca4a9980.604ENSGACG00000016033-9980.376Gasterosteus_aculeatus
ENSONIG00000008196smarca4a10088.428ENSGAGG00000016757SMARCA410088.166Gopherus_agassizii
ENSONIG00000008196smarca4a10088.355ENSGGOG00000009882SMARCA410088.341Gorilla_gorilla
ENSONIG00000008196smarca4a10099.386ENSHBUG00000021172smarca4a10099.386Haplochromis_burtoni
ENSONIG00000008196smarca4a10085.276ENSHBUG00000005447-9886.135Haplochromis_burtoni
ENSONIG00000008196smarca4a10087.477ENSHGLG00000010519SMARCA410087.761Heterocephalus_glaber_female
ENSONIG00000008196smarca4a10087.438ENSHGLG00100013774SMARCA410087.415Heterocephalus_glaber_male
ENSONIG00000008196smarca4a9794.304ENSHCOG00000009510smarca4a9694.774Hippocampus_comes
ENSONIG00000008196smarca4a10090.061ENSIPUG00000006107smarca4a10089.847Ictalurus_punctatus
ENSONIG00000008196smarca4a9886.192ENSIPUG00000016346-9785.888Ictalurus_punctatus
ENSONIG00000008196smarca4a10087.978ENSSTOG00000007939SMARCA410088.203Ictidomys_tridecemlineatus
ENSONIG00000008196smarca4a10086.405ENSJJAG00000012877Smarca410085.835Jaculus_jaculus
ENSONIG00000008196smarca4a10094.363ENSKMAG00000011931smarca4a10094.424Kryptolebias_marmoratus
ENSONIG00000008196smarca4a10085.185ENSKMAG00000019518-9888.316Kryptolebias_marmoratus
ENSONIG00000008196smarca4a9792.036ENSLBEG00000017383smarca4a9791.471Labrus_bergylta
ENSONIG00000008196smarca4a9981.667ENSLBEG00000020655-9882.582Labrus_bergylta
ENSONIG00000008196smarca4a5183.634ENSLACG00000015309SMARCA410083.474Latimeria_chalumnae
ENSONIG00000008196smarca4a10087.918ENSLOCG00000007820smarca4a9988.020Lepisosteus_oculatus
ENSONIG00000008196smarca4a10087.946ENSLAFG00000001433SMARCA410088.163Loxodonta_africana
ENSONIG00000008196smarca4a10088.355ENSMFAG00000032146SMARCA49988.341Macaca_fascicularis
ENSONIG00000008196smarca4a10088.355ENSMMUG00000012042SMARCA410088.341Macaca_mulatta
ENSONIG00000008196smarca4a10088.341ENSMNEG00000028512SMARCA410088.326Macaca_nemestrina
ENSONIG00000008196smarca4a10088.355ENSMLEG00000034976SMARCA410088.116Mandrillus_leucophaeus
ENSONIG00000008196smarca4a10096.015ENSMAMG00000009256smarca4a10096.015Mastacembelus_armatus
ENSONIG00000008196smarca4a9984.420ENSMAMG00000002841-9888.555Mastacembelus_armatus
ENSONIG00000008196smarca4a10099.263ENSMZEG00005003889smarca4a10099.263Maylandia_zebra
ENSONIG00000008196smarca4a9487.649ENSMZEG00005023861-9884.436Maylandia_zebra
ENSONIG00000008196smarca4a10087.823ENSMAUG00000020731Smarca410087.916Mesocricetus_auratus
ENSONIG00000008196smarca4a10088.177ENSMICG00000009806SMARCA410088.163Microcebus_murinus
ENSONIG00000008196smarca4a10087.638ENSMOCG00000022209Smarca410088.039Microtus_ochrogaster
ENSONIG00000008196smarca4a9983.197ENSMMOG00000008466-9883.145Mola_mola
ENSONIG00000008196smarca4a9593.738ENSMMOG00000007571smarca4a9893.867Mola_mola
ENSONIG00000008196smarca4a10087.046ENSMODG00000006287SMARCA410086.408Monodelphis_domestica
ENSONIG00000008196smarca4a8985.466ENSMALG00000021534-9685.548Monopterus_albus
ENSONIG00000008196smarca4a10095.031ENSMALG00000003388smarca4a10095.767Monopterus_albus
ENSONIG00000008196smarca4a10088.039MGP_CAROLIEiJ_G0031879Smarca410088.195Mus_caroli
ENSONIG00000008196smarca4a10088.039ENSMUSG00000032187Smarca410088.195Mus_musculus
ENSONIG00000008196smarca4a10088.490MGP_PahariEiJ_G0014745Smarca410088.524Mus_pahari
ENSONIG00000008196smarca4a10088.039MGP_SPRETEiJ_G0033003Smarca410088.195Mus_spretus
ENSONIG00000008196smarca4a10088.279ENSMPUG00000005711SMARCA410088.264Mustela_putorius_furo
ENSONIG00000008196smarca4a10088.649ENSMLUG00000004491-10088.010Myotis_lucifugus
ENSONIG00000008196smarca4a10088.497ENSNGAG00000021852Smarca410088.297Nannospalax_galili
ENSONIG00000008196smarca4a9795.048ENSNBRG00000011457smarca4a9895.563Neolamprologus_brichardi
ENSONIG00000008196smarca4a8985.396ENSNBRG00000018865-9986.022Neolamprologus_brichardi
ENSONIG00000008196smarca4a10082.574ENSNLEG00000012389SMARCA49485.556Nomascus_leucogenys
ENSONIG00000008196smarca4a8096.552ENSOPRG00000000885-7896.552Ochotona_princeps
ENSONIG00000008196smarca4a10086.162ENSODEG00000017127SMARCA410085.644Octodon_degus
ENSONIG00000008196smarca4a9882.741ENSOCUG00000001787SMARCA49882.537Oryctolagus_cuniculus
ENSONIG00000008196smarca4a9584.950ENSORLG00000003955-9584.586Oryzias_latipes
ENSONIG00000008196smarca4a10093.566ENSORLG00000015452smarca4a10093.505Oryzias_latipes
ENSONIG00000008196smarca4a10093.199ENSORLG00020004611smarca4a10093.566Oryzias_latipes_hni
ENSONIG00000008196smarca4a9584.896ENSORLG00020009728-9882.847Oryzias_latipes_hni
ENSONIG00000008196smarca4a10093.260ENSORLG00015016560smarca4a10093.566Oryzias_latipes_hsok
ENSONIG00000008196smarca4a9984.498ENSORLG00015007739-9584.649Oryzias_latipes_hsok
ENSONIG00000008196smarca4a9784.845ENSOMEG00000016626-9584.217Oryzias_melastigma
ENSONIG00000008196smarca4a10094.359ENSOMEG00000007486smarca4a10094.359Oryzias_melastigma
ENSONIG00000008196smarca4a8986.924ENSOGAG00000016148SMARCA410086.326Otolemur_garnettii
ENSONIG00000008196smarca4a10088.352ENSOARG00000017454SMARCA49888.239Ovis_aries
ENSONIG00000008196smarca4a10088.355ENSPPAG00000043191SMARCA410088.341Pan_paniscus
ENSONIG00000008196smarca4a10088.239ENSPPRG00000000064SMARCA410088.224Panthera_pardus
ENSONIG00000008196smarca4a8086.672ENSPTIG00000017447SMARCA410082.104Panthera_tigris_altaica
ENSONIG00000008196smarca4a10088.355ENSPTRG00000010488SMARCA410088.341Pan_troglodytes
ENSONIG00000008196smarca4a10088.464ENSPANG00000011042SMARCA49988.450Papio_anubis
ENSONIG00000008196smarca4a10086.408ENSPKIG00000010087-9887.312Paramormyrops_kingsleyae
ENSONIG00000008196smarca4a10089.435ENSPKIG00000007770SMARCA410090.232Paramormyrops_kingsleyae
ENSONIG00000008196smarca4a10082.809ENSPSIG00000005547SMARCA410082.432Pelodiscus_sinensis
ENSONIG00000008196smarca4a10087.823ENSPEMG00000020389Smarca410087.978Peromyscus_maniculatus_bairdii
ENSONIG00000008196smarca4a10088.704ENSPCIG00000017138SMARCA410088.614Phascolarctos_cinereus
ENSONIG00000008196smarca4a8988.981ENSPFOG00000012930-9984.510Poecilia_formosa
ENSONIG00000008196smarca4a10091.621ENSPFOG00000007892smarca4a10092.532Poecilia_formosa
ENSONIG00000008196smarca4a10091.682ENSPLAG00000014294smarca4a10092.593Poecilia_latipinna
ENSONIG00000008196smarca4a9987.453ENSPLAG00000018616-9887.713Poecilia_latipinna
ENSONIG00000008196smarca4a9585.949ENSPMEG00000008929-9885.948Poecilia_mexicana
ENSONIG00000008196smarca4a9592.273ENSPMEG00000003725smarca4a9693.031Poecilia_mexicana
ENSONIG00000008196smarca4a9585.337ENSPREG00000014823-9684.833Poecilia_reticulata
ENSONIG00000008196smarca4a9990.863ENSPREG00000014608smarca4a10091.949Poecilia_reticulata
ENSONIG00000008196smarca4a10086.232ENSPPYG00000009568SMARCA410085.913Pongo_abelii
ENSONIG00000008196smarca4a7986.755ENSPCAG00000014054SMARCA47592.969Procavia_capensis
ENSONIG00000008196smarca4a10088.047ENSPCOG00000023011SMARCA410088.101Propithecus_coquereli
ENSONIG00000008196smarca4a9585.206ENSPVAG00000007787SMARCA49683.616Pteropus_vampyrus
ENSONIG00000008196smarca4a9799.300ENSPNYG00000000717smarca4a9899.300Pundamilia_nyererei
ENSONIG00000008196smarca4a9585.462ENSPNYG00000023995-9886.248Pundamilia_nyererei
ENSONIG00000008196smarca4a9884.908ENSPNAG00000024136smarca4a9786.469Pygocentrus_nattereri
ENSONIG00000008196smarca4a9587.588ENSPNAG00000006636-9387.903Pygocentrus_nattereri
ENSONIG00000008196smarca4a10088.039ENSRNOG00000009271Smarca410088.195Rattus_norvegicus
ENSONIG00000008196smarca4a10088.293ENSRBIG00000038696SMARCA49988.279Rhinopithecus_bieti
ENSONIG00000008196smarca4a10088.293ENSRROG00000045509SMARCA410088.279Rhinopithecus_roxellana
ENSONIG00000008196smarca4a10088.101ENSSBOG00000026896SMARCA49690.381Saimiri_boliviensis_boliviensis
ENSONIG00000008196smarca4a10088.457ENSSHAG00000001642SMARCA410088.614Sarcophilus_harrisii
ENSONIG00000008196smarca4a9685.945ENSSFOG00015009921-9491.017Scleropages_formosus
ENSONIG00000008196smarca4a10091.153ENSSFOG00015013823smarca410091.310Scleropages_formosus
ENSONIG00000008196smarca4a10094.168ENSSMAG00000003200smarca4a10094.350Scophthalmus_maximus
ENSONIG00000008196smarca4a10082.335ENSSMAG00000014082-9981.314Scophthalmus_maximus
ENSONIG00000008196smarca4a9987.306ENSSDUG00000005388-10084.152Seriola_dumerili
ENSONIG00000008196smarca4a10092.875ENSSDUG00000017298smarca4a10092.937Seriola_dumerili
ENSONIG00000008196smarca4a9588.555ENSSLDG00000023663-9788.954Seriola_lalandi_dorsalis
ENSONIG00000008196smarca4a10096.715ENSSLDG00000024486smarca4a10096.715Seriola_lalandi_dorsalis
ENSONIG00000008196smarca4a6296.894ENSSARG00000013477SMARCA48196.894Sorex_araneus
ENSONIG00000008196smarca4a9585.307ENSSPUG00000004558SMARCA49885.029Sphenodon_punctatus
ENSONIG00000008196smarca4a10095.985ENSSPAG00000004248smarca4a10095.985Stegastes_partitus
ENSONIG00000008196smarca4a10084.382ENSSPAG00000012533-9984.005Stegastes_partitus
ENSONIG00000008196smarca4a10088.485ENSSSCG00000013629SMARCA410088.286Sus_scrofa
ENSONIG00000008196smarca4a5089.922ENSTGUG00000015488-9883.829Taeniopygia_guttata
ENSONIG00000008196smarca4a9088.364ENSTRUG00000004885smarca4a10088.364Takifugu_rubripes
ENSONIG00000008196smarca4a9583.832ENSTRUG00000001378SMARCA49884.043Takifugu_rubripes
ENSONIG00000008196smarca4a10082.786ENSTNIG00000004536SMARCA49984.377Tetraodon_nigroviridis
ENSONIG00000008196smarca4a7394.306ENSTNIG00000004859-10094.306Tetraodon_nigroviridis
ENSONIG00000008196smarca4a10085.593ENSTTRG00000009519SMARCA410084.545Tursiops_truncatus
ENSONIG00000008196smarca4a10088.341ENSUAMG00000014661SMARCA410088.326Ursus_americanus
ENSONIG00000008196smarca4a9584.399ENSUMAG00000022005SMARCA49891.067Ursus_maritimus
ENSONIG00000008196smarca4a10088.279ENSVVUG00000017820SMARCA49788.326Vulpes_vulpes
ENSONIG00000008196smarca4a10083.871ENSXETG00000009355smarca49984.631Xenopus_tropicalis
ENSONIG00000008196smarca4a9984.121ENSXCOG00000013494-9884.814Xiphophorus_couchianus
ENSONIG00000008196smarca4a10084.967ENSXMAG00000007030-9984.907Xiphophorus_maculatus
ENSONIG00000008196smarca4a10092.505ENSXMAG00000006321smarca4a10093.053Xiphophorus_maculatus

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