EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000008206 (Gene tree)
Gene ID: -
Gene Symbol: srrm1
Alias: -
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 12070 bases
Position: chrGL831177.1:3446882-3458951
Accession: 100712461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000010331	PWI	PF01480.17	1.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000010340	-	3526	XM_013271921	ENSONIP00000010331	927 (aa)	XP_013127375	I3JN87

Gene Model

Click here to download ENSONIG00000008206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000008206's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000008206	srrm1	54	79.400	ENSAPOG00000001170	srrm1	99	100.000	Acanthochromis_polyacanthus
ENSONIG00000008206	srrm1	54	80.400	ENSAOCG00000021757	srrm1	58	83.800	Amphiprion_ocellaris
ENSONIG00000008206	srrm1	54	79.800	ENSAPEG00000018964	srrm1	58	83.200	Amphiprion_percula
ENSONIG00000008206	srrm1	54	47.273	ENSDARG00000001244	srrm1	99	96.154	Danio_rerio
ENSONIG00000008206	srrm1	84	98.340	ENSHBUG00000020364	srrm1	99	98.340	Haplochromis_burtoni
ENSONIG00000008206	srrm1	54	80.800	ENSLBEG00000013936	srrm1	58	81.600	Labrus_bergylta
ENSONIG00000008206	srrm1	94	82.360	ENSMAMG00000010305	srrm1	58	80.200	Mastacembelus_armatus
ENSONIG00000008206	srrm1	51	56.477	ENSPKIG00000008252	srrm1	60	76.534	Paramormyrops_kingsleyae
ENSONIG00000008206	srrm1	54	72.328	ENSSDUG00000012967	srrm1	58	81.600	Seriola_dumerili
ENSONIG00000008206	srrm1	54	81.000	ENSSPAG00000009507	srrm1	58	83.400	Stegastes_partitus