EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000008300 (Gene tree)
Gene ID: 100689717
Gene Symbol: celf1
Alias: -
Full Name: CUGBP Elav-like family member 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 79086 bases
Position: chrGL831771.1:36510-115595
Accession: 100689717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000010443	RRM_1	PF00076.22	6.4e-51	1	3
ENSONIP00000010443	RRM_1	PF00076.22	6.4e-51	2	3
ENSONIP00000010443	RRM_1	PF00076.22	6.4e-51	3	3
ENSONIP00000010444	RRM_1	PF00076.22	2.7e-49	1	3
ENSONIP00000010444	RRM_1	PF00076.22	2.7e-49	2	3
ENSONIP00000010444	RRM_1	PF00076.22	2.7e-49	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000010452	-	2528	XM_005465963	ENSONIP00000010443	536 (aa)	XP_005466020	I3JNJ9
ENSONIT00000010453	-	1536	-	ENSONIP00000010444	511 (aa)	-	I3JNK0

Gene Model

Click here to download ENSONIG00000008300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000008300's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000008300	celf1	60	44.444	ENSONIG00000001096	elavl1a	78	44.444
ENSONIG00000008300	celf1	65	33.858	ENSONIG00000001538	elavl3	90	33.858
ENSONIG00000008300	celf1	66	32.895	ENSONIG00000002717	pabpc1b	59	32.895
ENSONIG00000008300	celf1	99	67.045	ENSONIG00000008624	-	99	66.667
ENSONIG00000008300	celf1	54	38.272	ENSONIG00000002360	elavl4	70	38.272
ENSONIG00000008300	celf1	58	32.911	ENSONIG00000015897	tia1	69	32.911
ENSONIG00000008300	celf1	95	72.121	ENSONIG00000017931	-	93	72.874
ENSONIG00000008300	celf1	60	31.646	ENSONIG00000007364	tia1l	68	31.646
ENSONIG00000008300	celf1	93	47.047	ENSONIG00000002755	si:dkey-205h23.2	64	66.418
ENSONIG00000008300	celf1	55	37.500	ENSONIG00000008176	pabpc4	53	37.500
ENSONIG00000008300	celf1	63	35.616	ENSONIG00000017314	pabpc1l	51	35.616
ENSONIG00000008300	celf1	85	39.506	ENSONIG00000007552	ELAVL2	75	39.506
ENSONIG00000008300	celf1	64	34.884	ENSONIG00000006871	-	50	34.884
ENSONIG00000008300	celf1	92	45.621	ENSONIG00000019703	celf3a	99	43.776
ENSONIG00000008300	celf1	95	45.312	ENSONIG00000004856	celf5a	87	50.000
ENSONIG00000008300	celf1	56	46.154	ENSONIG00000003197	-	78	41.758

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000008300	celf1	100	84.302	ENSG00000149187	CELF1	100	89.189	Homo_sapiens
ENSONIG00000008300	celf1	95	95.102	ENSAPOG00000024000	celf1	100	95.297	Acanthochromis_polyacanthus
ENSONIG00000008300	celf1	100	84.854	ENSAMEG00000007596	CELF1	100	84.854	Ailuropoda_melanoleuca
ENSONIG00000008300	celf1	95	92.990	ENSACIG00000023843	celf1	100	93.182	Amphilophus_citrinellus
ENSONIG00000008300	celf1	95	95.102	ENSAOCG00000001252	celf1	100	95.297	Amphiprion_ocellaris
ENSONIG00000008300	celf1	98	93.676	ENSAPEG00000002340	celf1	100	94.664	Amphiprion_percula
ENSONIG00000008300	celf1	95	89.463	ENSATEG00000010871	celf1	100	89.648	Anabas_testudineus
ENSONIG00000008300	celf1	100	84.405	ENSACAG00000002114	CELF1	100	84.405	Anolis_carolinensis
ENSONIG00000008300	celf1	100	84.660	ENSANAG00000031770	CELF1	100	84.660	Aotus_nancymaae
ENSONIG00000008300	celf1	100	98.434	ENSACLG00000010181	-	100	98.434	Astatotilapia_calliptera
ENSONIG00000008300	celf1	98	85.441	ENSAMXG00000020576	celf1	100	84.387	Astyanax_mexicanus
ENSONIG00000008300	celf1	100	84.660	ENSBTAG00000002520	CELF1	100	84.660	Bos_taurus
ENSONIG00000008300	celf1	100	84.302	ENSCJAG00000020133	CELF1	100	83.915	Callithrix_jacchus
ENSONIG00000008300	celf1	100	84.660	ENSCAFG00000008452	CELF1	100	84.660	Canis_familiaris
ENSONIG00000008300	celf1	100	84.660	ENSCAFG00020025487	CELF1	100	84.660	Canis_lupus_dingo
ENSONIG00000008300	celf1	100	85.049	ENSCHIG00000024582	CELF1	100	85.049	Capra_hircus
ENSONIG00000008300	celf1	100	83.495	ENSTSYG00000003866	CELF1	100	84.600	Carlito_syrichta
ENSONIG00000008300	celf1	100	60.777	ENSCAPG00000006787	CELF1	100	61.748	Cavia_aperea
ENSONIG00000008300	celf1	95	82.413	ENSCPOG00000036381	CELF1	100	83.607	Cavia_porcellus
ENSONIG00000008300	celf1	100	84.302	ENSCCAG00000033487	CELF1	100	84.600	Cebus_capucinus
ENSONIG00000008300	celf1	95	83.402	ENSCATG00000040143	CELF1	100	84.600	Cercocebus_atys
ENSONIG00000008300	celf1	100	84.466	ENSCLAG00000011791	CELF1	100	84.466	Chinchilla_lanigera
ENSONIG00000008300	celf1	100	84.854	ENSCSAG00000005786	CELF1	100	84.854	Chlorocebus_sabaeus
ENSONIG00000008300	celf1	59	97.872	ENSCHOG00000004196	-	68	97.872	Choloepus_hoffmanni
ENSONIG00000008300	celf1	100	83.852	ENSCPBG00000022914	CELF1	100	83.707	Chrysemys_picta_bellii
ENSONIG00000008300	celf1	100	83.495	ENSCANG00000032689	CELF1	100	84.466	Colobus_angolensis_palliatus
ENSONIG00000008300	celf1	100	84.272	ENSCGRG00001011274	Celf1	100	84.272	Cricetulus_griseus_chok1gshd
ENSONIG00000008300	celf1	100	84.272	ENSCGRG00000015357	Celf1	100	84.272	Cricetulus_griseus_crigri
ENSONIG00000008300	celf1	95	80.000	ENSCSEG00000008675	celf1	100	78.144	Cynoglossus_semilaevis
ENSONIG00000008300	celf1	95	88.845	ENSDARG00000005315	celf1	100	97.041	Danio_rerio
ENSONIG00000008300	celf1	100	84.660	ENSDNOG00000009523	CELF1	100	84.600	Dasypus_novemcinctus
ENSONIG00000008300	celf1	100	74.951	ENSDORG00000013721	Celf1	100	75.244	Dipodomys_ordii
ENSONIG00000008300	celf1	69	90.698	ENSETEG00000004507	CELF1	83	90.698	Echinops_telfairi
ENSONIG00000008300	celf1	100	76.163	ENSEASG00005010831	CELF1	100	77.132	Equus_asinus_asinus
ENSONIG00000008300	celf1	100	84.660	ENSECAG00000007741	CELF1	100	83.495	Equus_caballus
ENSONIG00000008300	celf1	95	70.492	ENSEEUG00000009782	CELF1	100	70.021	Erinaceus_europaeus
ENSONIG00000008300	celf1	95	90.702	ENSELUG00000023173	celf1	100	90.890	Esox_lucius
ENSONIG00000008300	celf1	100	84.660	ENSFCAG00000002535	CELF1	100	84.660	Felis_catus
ENSONIG00000008300	celf1	100	84.047	ENSFALG00000006402	CELF1	100	83.658	Ficedula_albicollis
ENSONIG00000008300	celf1	95	83.469	ENSFDAG00000008517	CELF1	100	83.811	Fukomys_damarensis
ENSONIG00000008300	celf1	95	90.854	ENSGMOG00000012783	celf1	99	90.854	Gadus_morhua
ENSONIG00000008300	celf1	100	84.241	ENSGALG00000008097	CELF1	100	83.852	Gallus_gallus
ENSONIG00000008300	celf1	95	87.302	ENSGACG00000014226	celf1	99	83.054	Gasterosteus_aculeatus
ENSONIG00000008300	celf1	95	83.130	ENSGAGG00000011562	CELF1	100	83.918	Gopherus_agassizii
ENSONIG00000008300	celf1	100	84.302	ENSGGOG00000004106	CELF1	100	83.915	Gorilla_gorilla
ENSONIG00000008300	celf1	100	98.434	ENSHBUG00000017881	celf1	100	98.434	Haplochromis_burtoni
ENSONIG00000008300	celf1	95	82.413	ENSHGLG00000006909	-	100	83.607	Heterocephalus_glaber_female
ENSONIG00000008300	celf1	95	77.710	ENSHGLG00000019214	-	100	77.459	Heterocephalus_glaber_female
ENSONIG00000008300	celf1	95	79.755	ENSHGLG00100017423	-	100	79.508	Heterocephalus_glaber_male
ENSONIG00000008300	celf1	95	82.413	ENSHGLG00100013863	-	100	83.607	Heterocephalus_glaber_male
ENSONIG00000008300	celf1	95	91.753	ENSHCOG00000000258	celf1	100	92.355	Hippocampus_comes
ENSONIG00000008300	celf1	95	88.048	ENSIPUG00000023708	celf1	100	87.824	Ictalurus_punctatus
ENSONIG00000008300	celf1	100	84.660	ENSSTOG00000000613	CELF1	100	84.660	Ictidomys_tridecemlineatus
ENSONIG00000008300	celf1	100	84.660	ENSJJAG00000020280	Celf1	100	84.660	Jaculus_jaculus
ENSONIG00000008300	celf1	66	92.035	ENSLBEG00000002047	-	99	92.035	Labrus_bergylta
ENSONIG00000008300	celf1	95	94.251	ENSLBEG00000018296	celf1	100	90.909	Labrus_bergylta
ENSONIG00000008300	celf1	70	74.194	ENSLACG00000018990	CELF1	92	75.135	Latimeria_chalumnae
ENSONIG00000008300	celf1	95	86.879	ENSLOCG00000005966	celf1	99	83.955	Lepisosteus_oculatus
ENSONIG00000008300	celf1	100	84.078	ENSLAFG00000003484	CELF1	100	84.078	Loxodonta_africana
ENSONIG00000008300	celf1	95	82.618	ENSMFAG00000003505	CELF1	100	83.811	Macaca_fascicularis
ENSONIG00000008300	celf1	100	83.495	ENSMMUG00000011657	CELF1	100	84.466	Macaca_mulatta
ENSONIG00000008300	celf1	100	84.302	ENSMNEG00000022558	CELF1	100	84.600	Macaca_nemestrina
ENSONIG00000008300	celf1	100	84.660	ENSMLEG00000040834	CELF1	100	84.660	Mandrillus_leucophaeus
ENSONIG00000008300	celf1	100	86.278	ENSMAMG00000010052	celf1	100	89.256	Mastacembelus_armatus
ENSONIG00000008300	celf1	100	98.434	ENSMZEG00005018307	celf1	100	98.434	Maylandia_zebra
ENSONIG00000008300	celf1	95	81.837	ENSMGAG00000010629	CELF1	96	83.231	Meleagris_gallopavo
ENSONIG00000008300	celf1	100	84.272	ENSMAUG00000009468	Celf1	100	84.272	Mesocricetus_auratus
ENSONIG00000008300	celf1	100	84.302	ENSMICG00000045113	CELF1	100	83.915	Microcebus_murinus
ENSONIG00000008300	celf1	100	84.466	ENSMOCG00000012633	Celf1	100	84.466	Microtus_ochrogaster
ENSONIG00000008300	celf1	95	91.598	ENSMMOG00000015460	celf1	100	88.314	Mola_mola
ENSONIG00000008300	celf1	95	84.426	ENSMODG00000019913	CELF1	100	85.626	Monodelphis_domestica
ENSONIG00000008300	celf1	100	84.466	MGP_CAROLIEiJ_G0023949	Celf1	100	84.466	Mus_caroli
ENSONIG00000008300	celf1	100	84.466	ENSMUSG00000005506	Celf1	100	84.466	Mus_musculus
ENSONIG00000008300	celf1	100	84.466	MGP_PahariEiJ_G0025385	Celf1	100	84.466	Mus_pahari
ENSONIG00000008300	celf1	100	84.272	MGP_SPRETEiJ_G0024859	Celf1	100	84.272	Mus_spretus
ENSONIG00000008300	celf1	100	84.660	ENSMPUG00000003960	CELF1	93	84.660	Mustela_putorius_furo
ENSONIG00000008300	celf1	100	83.430	ENSMLUG00000016631	CELF1	100	83.044	Myotis_lucifugus
ENSONIG00000008300	celf1	100	81.942	ENSNGAG00000017390	Celf1	100	82.913	Nannospalax_galili
ENSONIG00000008300	celf1	94	64.082	ENSNBRG00000023547	-	85	62.140	Neolamprologus_brichardi
ENSONIG00000008300	celf1	100	83.495	ENSNLEG00000014638	CELF1	100	84.466	Nomascus_leucogenys
ENSONIG00000008300	celf1	95	85.041	ENSMEUG00000007763	CELF1	100	86.242	Notamacropus_eugenii
ENSONIG00000008300	celf1	95	82.992	ENSOPRG00000003239	-	100	84.189	Ochotona_princeps
ENSONIG00000008300	celf1	100	84.466	ENSODEG00000015204	CELF1	100	84.466	Octodon_degus
ENSONIG00000008300	celf1	100	85.078	ENSOANG00000007896	CELF1	99	84.690	Ornithorhynchus_anatinus
ENSONIG00000008300	celf1	100	84.854	ENSOCUG00000001311	CELF1	100	84.854	Oryctolagus_cuniculus
ENSONIG00000008300	celf1	95	86.912	ENSOMEG00000002381	celf1	100	87.090	Oryzias_melastigma
ENSONIG00000008300	celf1	100	84.008	ENSOGAG00000011600	CELF1	100	83.622	Otolemur_garnettii
ENSONIG00000008300	celf1	100	84.200	ENSOARG00000006924	CELF1	100	85.010	Ovis_aries
ENSONIG00000008300	celf1	95	83.402	ENSPPAG00000033870	CELF1	100	84.600	Pan_paniscus
ENSONIG00000008300	celf1	100	83.495	ENSPPRG00000002376	CELF1	100	84.600	Panthera_pardus
ENSONIG00000008300	celf1	100	84.660	ENSPTIG00000003974	CELF1	100	84.660	Panthera_tigris_altaica
ENSONIG00000008300	celf1	100	84.302	ENSPTRG00000052299	CELF1	100	83.915	Pan_troglodytes
ENSONIG00000008300	celf1	100	84.302	ENSPANG00000021676	CELF1	100	83.915	Papio_anubis
ENSONIG00000008300	celf1	95	89.072	ENSPKIG00000012324	celf1	100	90.083	Paramormyrops_kingsleyae
ENSONIG00000008300	celf1	100	81.467	ENSPSIG00000003922	CELF1	100	81.467	Pelodiscus_sinensis
ENSONIG00000008300	celf1	100	84.775	ENSPMGG00000013192	celf1	96	80.903	Periophthalmus_magnuspinnatus
ENSONIG00000008300	celf1	100	84.466	ENSPEMG00000015644	Celf1	100	84.466	Peromyscus_maniculatus_bairdii
ENSONIG00000008300	celf1	98	86.111	ENSPCIG00000022947	CELF1	100	86.111	Phascolarctos_cinereus
ENSONIG00000008300	celf1	66	76.716	ENSPFOG00000000961	-	100	76.036	Poecilia_formosa
ENSONIG00000008300	celf1	84	77.353	ENSPLAG00000019373	-	82	77.286	Poecilia_latipinna
ENSONIG00000008300	celf1	100	80.897	ENSPREG00000022185	-	100	79.572	Poecilia_reticulata
ENSONIG00000008300	celf1	100	83.915	ENSPPYG00000003302	CELF1	100	83.915	Pongo_abelii
ENSONIG00000008300	celf1	95	82.377	ENSPCAG00000002631	CELF1	100	83.573	Procavia_capensis
ENSONIG00000008300	celf1	100	79.264	ENSPCOG00000021865	CELF1	100	80.233	Propithecus_coquereli
ENSONIG00000008300	celf1	92	82.710	ENSPVAG00000007340	CELF1	100	84.075	Pteropus_vampyrus
ENSONIG00000008300	celf1	75	86.905	ENSPNYG00000023719	-	88	81.765	Pundamilia_nyererei
ENSONIG00000008300	celf1	98	85.660	ENSPNAG00000013418	celf1	100	84.601	Pygocentrus_nattereri
ENSONIG00000008300	celf1	95	82.209	ENSRNOG00000010379	Celf1	100	83.402	Rattus_norvegicus
ENSONIG00000008300	celf1	100	84.302	ENSRBIG00000042406	CELF1	100	83.915	Rhinopithecus_bieti
ENSONIG00000008300	celf1	100	84.660	ENSRROG00000032588	CELF1	100	84.660	Rhinopithecus_roxellana
ENSONIG00000008300	celf1	100	74.419	ENSSBOG00000021912	CELF1	100	74.319	Saimiri_boliviensis_boliviensis
ENSONIG00000008300	celf1	95	83.845	ENSSHAG00000017438	CELF1	100	85.041	Sarcophilus_harrisii
ENSONIG00000008300	celf1	98	87.921	ENSSFOG00015019353	celf1	100	87.356	Scleropages_formosus
ENSONIG00000008300	celf1	98	92.857	ENSSMAG00000013827	celf1	100	93.487	Scophthalmus_maximus
ENSONIG00000008300	celf1	98	92.659	ENSSDUG00000011558	celf1	100	93.295	Seriola_dumerili
ENSONIG00000008300	celf1	100	95.117	ENSSLDG00000012863	celf1	100	95.117	Seriola_lalandi_dorsalis
ENSONIG00000008300	celf1	95	79.713	ENSSARG00000003207	CELF1	100	79.877	Sorex_araneus
ENSONIG00000008300	celf1	100	84.942	ENSSPUG00000004228	CELF1	100	84.556	Sphenodon_punctatus
ENSONIG00000008300	celf1	95	93.265	ENSSPAG00000009569	celf1	100	94.888	Stegastes_partitus
ENSONIG00000008300	celf1	100	84.660	ENSSSCG00000013233	CELF1	100	84.660	Sus_scrofa
ENSONIG00000008300	celf1	100	84.720	ENSTGUG00000010377	CELF1	100	85.106	Taeniopygia_guttata
ENSONIG00000008300	celf1	95	73.523	ENSTRUG00000000617	celf1	84	95.238	Takifugu_rubripes
ENSONIG00000008300	celf1	79	88.079	ENSTBEG00000005140	CELF1	79	90.152	Tupaia_belangeri
ENSONIG00000008300	celf1	95	83.402	ENSTTRG00000014157	CELF1	100	84.600	Tursiops_truncatus
ENSONIG00000008300	celf1	90	83.441	ENSUAMG00000000223	CELF1	100	83.441	Ursus_americanus
ENSONIG00000008300	celf1	100	84.660	ENSUMAG00000009218	CELF1	100	84.660	Ursus_maritimus
ENSONIG00000008300	celf1	95	73.770	ENSVPAG00000000336	CELF1	100	73.922	Vicugna_pacos
ENSONIG00000008300	celf1	100	84.660	ENSVVUG00000023439	CELF1	100	84.660	Vulpes_vulpes
ENSONIG00000008300	celf1	95	81.563	ENSXETG00000009044	celf1	100	79.719	Xenopus_tropicalis
ENSONIG00000008300	celf1	84	66.469	ENSXCOG00000017706	-	87	67.160	Xiphophorus_couchianus
ENSONIG00000008300	celf1	95	78.439	ENSXMAG00000029339	-	100	77.393	Xiphophorus_maculatus