EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000008341 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 23347 bases
Position: chrGL831154.1:1755403-1778749
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000010487	Fox-1_C	PF12414.8	1.2e-38	1	1
ENSONIP00000010487	RRM_1	PF00076.22	1.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000010496	-	1197	-	ENSONIP00000010487	398 (aa)	-	I3JNP3

Gene Model

Click here to download ENSONIG00000008341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000008341's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000008341	-	98	66.089	ENSONIG00000017998	rbfox2	96	65.228
ENSONIG00000008341	-	95	51.145	ENSONIG00000009549	rbfox3b	80	50.284
ENSONIG00000008341	-	71	57.986	ENSONIG00000012754	rbfox1l	63	54.704
ENSONIG00000008341	-	95	53.708	ENSONIG00000007282	-	69	62.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000008341	-	90	64.835	ENSG00000100320	RBFOX2	99	62.917	Homo_sapiens
ENSONIG00000008341	-	97	65.679	ENSAPOG00000004877	rbfox2	78	63.980	Acanthochromis_polyacanthus
ENSONIG00000008341	-	99	80.788	ENSAPOG00000021561	-	88	82.443	Acanthochromis_polyacanthus
ENSONIG00000008341	-	77	70.279	ENSAMEG00000007228	RBFOX2	94	69.333	Ailuropoda_melanoleuca
ENSONIG00000008341	-	62	61.479	ENSACIG00000001690	rbfox2	90	56.890	Amphilophus_citrinellus
ENSONIG00000008341	-	99	80.542	ENSAOCG00000015358	-	89	81.425	Amphiprion_ocellaris
ENSONIG00000008341	-	97	65.432	ENSAOCG00000013752	rbfox2	78	63.728	Amphiprion_ocellaris
ENSONIG00000008341	-	97	65.679	ENSAPEG00000022359	rbfox2	78	63.980	Amphiprion_percula
ENSONIG00000008341	-	99	80.542	ENSAPEG00000013905	-	78	81.472	Amphiprion_percula
ENSONIG00000008341	-	99	79.753	ENSATEG00000009959	-	87	78.827	Anabas_testudineus
ENSONIG00000008341	-	97	65.012	ENSATEG00000021951	rbfox2	78	63.728	Anabas_testudineus
ENSONIG00000008341	-	90	64.820	ENSAPLG00000007609	RBFOX2	91	61.453	Anas_platyrhynchos
ENSONIG00000008341	-	90	64.820	ENSACAG00000016535	RBFOX2	77	61.453	Anolis_carolinensis
ENSONIG00000008341	-	78	70.253	ENSANAG00000015245	RBFOX2	99	66.454	Aotus_nancymaae
ENSONIG00000008341	-	99	83.251	ENSACLG00000017380	-	87	80.798	Astatotilapia_calliptera
ENSONIG00000008341	-	97	63.951	ENSACLG00000009744	rbfox2	78	62.814	Astatotilapia_calliptera
ENSONIG00000008341	-	97	65.526	ENSAMXG00000011451	rbfox2	97	60.902	Astyanax_mexicanus
ENSONIG00000008341	-	97	60.149	ENSBTAG00000020125	RBFOX2	93	60.942	Bos_taurus
ENSONIG00000008341	-	90	64.286	ENSCJAG00000038886	-	88	60.882	Callithrix_jacchus
ENSONIG00000008341	-	90	64.171	ENSCJAG00000019456	-	91	60.638	Callithrix_jacchus
ENSONIG00000008341	-	90	65.014	ENSCAFG00000001701	RBFOX2	91	61.602	Canis_familiaris
ENSONIG00000008341	-	90	54.026	ENSCAFG00020004541	RBFOX2	60	57.959	Canis_lupus_dingo
ENSONIG00000008341	-	97	62.808	ENSCHIG00000014027	RBFOX2	92	59.116	Capra_hircus
ENSONIG00000008341	-	97	63.776	ENSTSYG00000014123	RBFOX2	91	61.602	Carlito_syrichta
ENSONIG00000008341	-	87	59.664	ENSCAPG00000014308	RBFOX2	87	53.672	Cavia_aperea
ENSONIG00000008341	-	97	63.427	ENSCPOG00000022180	RBFOX2	90	61.453	Cavia_porcellus
ENSONIG00000008341	-	90	64.560	ENSCCAG00000036584	RBFOX2	91	61.157	Cebus_capucinus
ENSONIG00000008341	-	90	64.835	ENSCATG00000038655	RBFOX2	91	61.433	Cercocebus_atys
ENSONIG00000008341	-	97	60.769	ENSCLAG00000017106	RBFOX2	98	57.662	Chinchilla_lanigera
ENSONIG00000008341	-	71	61.745	ENSCSAG00000008110	RBFOX2	75	61.224	Chlorocebus_sabaeus
ENSONIG00000008341	-	74	62.013	ENSCHOG00000002887	RBFOX2	95	60.606	Choloepus_hoffmanni
ENSONIG00000008341	-	90	64.820	ENSCPBG00000023144	RBFOX2	96	61.453	Chrysemys_picta_bellii
ENSONIG00000008341	-	90	64.835	ENSCANG00000035832	RBFOX2	96	61.453	Colobus_angolensis_palliatus
ENSONIG00000008341	-	90	64.820	ENSCGRG00001017727	Rbfox2	91	61.453	Cricetulus_griseus_chok1gshd
ENSONIG00000008341	-	90	64.932	ENSCGRG00000014237	Rbfox2	91	61.602	Cricetulus_griseus_crigri
ENSONIG00000008341	-	97	63.325	ENSCSEG00000007748	rbfox2	79	64.020	Cynoglossus_semilaevis
ENSONIG00000008341	-	99	77.033	ENSCSEG00000007360	-	82	78.079	Cynoglossus_semilaevis
ENSONIG00000008341	-	97	74.935	ENSCVAG00000016503	-	98	74.611	Cyprinodon_variegatus
ENSONIG00000008341	-	61	67.692	ENSCVAG00000004491	rbfox2	100	65.234	Cyprinodon_variegatus
ENSONIG00000008341	-	65	66.906	ENSDARG00000052182	rbfox2	100	66.423	Danio_rerio
ENSONIG00000008341	-	90	64.738	ENSDNOG00000004372	RBFOX2	87	61.878	Dasypus_novemcinctus
ENSONIG00000008341	-	90	59.557	ENSDORG00000015003	Rbfox2	96	57.542	Dipodomys_ordii
ENSONIG00000008341	-	90	55.827	ENSETEG00000005638	RBFOX2	89	51.902	Echinops_telfairi
ENSONIG00000008341	-	90	64.820	ENSEASG00005018920	RBFOX2	77	62.011	Equus_asinus_asinus
ENSONIG00000008341	-	90	64.820	ENSECAG00000018923	RBFOX2	77	62.011	Equus_caballus
ENSONIG00000008341	-	86	58.074	ENSEEUG00000004549	RBFOX2	89	53.977	Erinaceus_europaeus
ENSONIG00000008341	-	99	65.972	ENSELUG00000009404	-	89	62.198	Esox_lucius
ENSONIG00000008341	-	71	64.706	ENSELUG00000000102	rbfox2	100	63.704	Esox_lucius
ENSONIG00000008341	-	97	61.125	ENSFCAG00000010061	RBFOX2	90	59.497	Felis_catus
ENSONIG00000008341	-	90	64.820	ENSFALG00000013111	RBFOX2	90	61.453	Ficedula_albicollis
ENSONIG00000008341	-	71	56.842	ENSFDAG00000006204	RBFOX2	55	70.811	Fukomys_damarensis
ENSONIG00000008341	-	97	66.420	ENSFHEG00000010546	rbfox2	85	58.710	Fundulus_heteroclitus
ENSONIG00000008341	-	97	57.214	ENSGMOG00000005278	rbfox2	97	56.701	Gadus_morhua
ENSONIG00000008341	-	69	60.727	ENSGALG00000012540	RBFOX2	72	60.364	Gallus_gallus
ENSONIG00000008341	-	61	68.217	ENSGAFG00000008448	rbfox2	100	65.354	Gambusia_affinis
ENSONIG00000008341	-	98	70.707	ENSGACG00000007174	-	98	71.282	Gasterosteus_aculeatus
ENSONIG00000008341	-	97	63.930	ENSGACG00000015968	rbfox2	97	62.660	Gasterosteus_aculeatus
ENSONIG00000008341	-	90	64.820	ENSGAGG00000025884	RBFOX2	91	61.453	Gopherus_agassizii
ENSONIG00000008341	-	90	64.835	ENSGGOG00000037332	RBFOX2	91	61.433	Gorilla_gorilla
ENSONIG00000008341	-	99	83.005	ENSHBUG00000000856	-	78	84.264	Haplochromis_burtoni
ENSONIG00000008341	-	97	64.039	ENSHBUG00000004356	rbfox2	83	62.814	Haplochromis_burtoni
ENSONIG00000008341	-	96	63.171	ENSHGLG00000012907	RBFOX2	92	61.602	Heterocephalus_glaber_female
ENSONIG00000008341	-	90	64.171	ENSHGLG00100009986	RBFOX2	91	60.916	Heterocephalus_glaber_male
ENSONIG00000008341	-	97	65.679	ENSHCOG00000016102	rbfox2	78	63.819	Hippocampus_comes
ENSONIG00000008341	-	99	75.306	ENSHCOG00000005662	-	77	76.826	Hippocampus_comes
ENSONIG00000008341	-	97	61.425	ENSIPUG00000016896	rbfox2	97	59.194	Ictalurus_punctatus
ENSONIG00000008341	-	90	62.050	ENSSTOG00000014841	RBFOX2	91	58.939	Ictidomys_tridecemlineatus
ENSONIG00000008341	-	90	62.849	ENSJJAG00000014885	Rbfox2	91	60.615	Jaculus_jaculus
ENSONIG00000008341	-	96	64.677	ENSKMAG00000021880	-	78	62.129	Kryptolebias_marmoratus
ENSONIG00000008341	-	99	79.115	ENSKMAG00000013354	-	98	80.253	Kryptolebias_marmoratus
ENSONIG00000008341	-	52	65.611	ENSLBEG00000026187	rbfox2	82	61.927	Labrus_bergylta
ENSONIG00000008341	-	59	55.144	ENSLBEG00000028310	-	57	60.190	Labrus_bergylta
ENSONIG00000008341	-	90	58.967	ENSLACG00000003339	RBFOX2	91	56.593	Latimeria_chalumnae
ENSONIG00000008341	-	90	62.834	ENSLAFG00000027140	RBFOX2	93	60.377	Loxodonta_africana
ENSONIG00000008341	-	90	64.835	ENSMFAG00000031994	RBFOX2	91	61.433	Macaca_fascicularis
ENSONIG00000008341	-	90	64.835	ENSMMUG00000014010	RBFOX2	96	61.453	Macaca_mulatta
ENSONIG00000008341	-	90	64.835	ENSMNEG00000034388	RBFOX2	91	61.433	Macaca_nemestrina
ENSONIG00000008341	-	90	64.835	ENSMLEG00000005854	RBFOX2	91	61.433	Mandrillus_leucophaeus
ENSONIG00000008341	-	96	80.357	ENSMAMG00000008980	-	81	80.357	Mastacembelus_armatus
ENSONIG00000008341	-	97	65.848	ENSMAMG00000004293	rbfox2	98	62.308	Mastacembelus_armatus
ENSONIG00000008341	-	99	80.542	ENSMZEG00005004959	-	87	80.798	Maylandia_zebra
ENSONIG00000008341	-	97	61.386	ENSMZEG00005023838	rbfox2	97	59.653	Maylandia_zebra
ENSONIG00000008341	-	52	64.679	ENSMGAG00000012724	RBFOX2	100	59.535	Meleagris_gallopavo
ENSONIG00000008341	-	96	61.340	ENSMAUG00000018816	Rbfox2	91	58.939	Mesocricetus_auratus
ENSONIG00000008341	-	90	64.362	ENSMICG00000035417	RBFOX2	91	61.067	Microcebus_murinus
ENSONIG00000008341	-	76	50.000	ENSMICG00000046341	-	70	49.462	Microcebus_murinus
ENSONIG00000008341	-	90	62.050	ENSMOCG00000009327	Rbfox2	91	58.939	Microtus_ochrogaster
ENSONIG00000008341	-	71	63.545	ENSMMOG00000008287	rbfox2	100	59.023	Mola_mola
ENSONIG00000008341	-	90	64.456	ENSMODG00000001122	RBFOX2	93	61.170	Monodelphis_domestica
ENSONIG00000008341	-	51	67.606	ENSMALG00000002264	-	73	71.503	Monopterus_albus
ENSONIG00000008341	-	65	71.168	ENSMALG00000000623	rbfox2	100	69.259	Monopterus_albus
ENSONIG00000008341	-	90	64.820	MGP_CAROLIEiJ_G0019957	Rbfox2	91	61.453	Mus_caroli
ENSONIG00000008341	-	90	64.932	ENSMUSG00000033565	Rbfox2	91	61.602	Mus_musculus
ENSONIG00000008341	-	90	64.820	MGP_PahariEiJ_G0019967	Rbfox2	91	61.453	Mus_pahari
ENSONIG00000008341	-	90	64.820	MGP_SPRETEiJ_G0020860	Rbfox2	91	61.453	Mus_spretus
ENSONIG00000008341	-	90	64.171	ENSMPUG00000012555	RBFOX2	86	60.916	Mustela_putorius_furo
ENSONIG00000008341	-	90	62.599	ENSMLUG00000002676	RBFOX2	87	60.428	Myotis_lucifugus
ENSONIG00000008341	-	90	62.050	ENSNGAG00000020528	Rbfox2	91	58.939	Nannospalax_galili
ENSONIG00000008341	-	97	64.851	ENSNBRG00000018155	rbfox2	78	62.972	Neolamprologus_brichardi
ENSONIG00000008341	-	81	80.422	ENSNBRG00000001568	-	74	82.390	Neolamprologus_brichardi
ENSONIG00000008341	-	90	64.560	ENSNLEG00000034979	RBFOX2	96	57.542	Nomascus_leucogenys
ENSONIG00000008341	-	90	60.904	ENSMEUG00000001547	RBFOX2	94	57.067	Notamacropus_eugenii
ENSONIG00000008341	-	90	55.833	ENSOPRG00000014878	RBFOX2	76	52.661	Ochotona_princeps
ENSONIG00000008341	-	90	63.904	ENSODEG00000009937	RBFOX2	91	58.659	Octodon_degus
ENSONIG00000008341	-	71	62.456	ENSOANG00000007489	RBFOX2	88	61.922	Ornithorhynchus_anatinus
ENSONIG00000008341	-	90	56.911	ENSOCUG00000001349	RBFOX2	86	54.645	Oryctolagus_cuniculus
ENSONIG00000008341	-	99	77.696	ENSORLG00000014948	-	78	78.030	Oryzias_latipes
ENSONIG00000008341	-	97	63.990	ENSORLG00000028082	rbfox2	97	63.614	Oryzias_latipes
ENSONIG00000008341	-	97	64.320	ENSORLG00020008976	rbfox2	97	63.614	Oryzias_latipes_hni
ENSONIG00000008341	-	99	77.941	ENSORLG00020005676	-	78	78.283	Oryzias_latipes_hni
ENSONIG00000008341	-	99	77.451	ENSORLG00015000797	-	78	77.778	Oryzias_latipes_hsok
ENSONIG00000008341	-	97	64.320	ENSORLG00015007027	rbfox2	97	63.614	Oryzias_latipes_hsok
ENSONIG00000008341	-	97	65.122	ENSOMEG00000015966	rbfox2	78	62.779	Oryzias_melastigma
ENSONIG00000008341	-	99	79.115	ENSOMEG00000007909	-	78	79.747	Oryzias_melastigma
ENSONIG00000008341	-	90	64.362	ENSOGAG00000033250	RBFOX2	92	61.067	Otolemur_garnettii
ENSONIG00000008341	-	90	63.836	ENSOARG00000018669	RBFOX2	91	60.000	Ovis_aries
ENSONIG00000008341	-	90	64.835	ENSPPAG00000035653	RBFOX2	91	61.433	Pan_paniscus
ENSONIG00000008341	-	90	65.479	ENSPPRG00000015635	RBFOX2	96	62.011	Panthera_pardus
ENSONIG00000008341	-	90	65.479	ENSPTIG00000019147	RBFOX2	92	62.155	Panthera_tigris_altaica
ENSONIG00000008341	-	98	56.965	ENSPTRG00000014305	RBFOX2	91	61.433	Pan_troglodytes
ENSONIG00000008341	-	97	60.149	ENSPANG00000007030	RBFOX2	91	58.491	Papio_anubis
ENSONIG00000008341	-	96	58.647	ENSPKIG00000006854	-	79	56.171	Paramormyrops_kingsleyae
ENSONIG00000008341	-	97	54.831	ENSPKIG00000010816	-	99	51.422	Paramormyrops_kingsleyae
ENSONIG00000008341	-	90	65.097	ENSPSIG00000017828	RBFOX2	91	61.732	Pelodiscus_sinensis
ENSONIG00000008341	-	65	67.897	ENSPMGG00000007138	rbfox2	100	66.541	Periophthalmus_magnuspinnatus
ENSONIG00000008341	-	79	72.586	ENSPMGG00000016969	-	87	72.698	Periophthalmus_magnuspinnatus
ENSONIG00000008341	-	90	62.050	ENSPEMG00000012542	Rbfox2	91	58.939	Peromyscus_maniculatus_bairdii
ENSONIG00000008341	-	90	65.014	ENSPCIG00000021550	RBFOX2	96	61.667	Phascolarctos_cinereus
ENSONIG00000008341	-	97	64.778	ENSPFOG00000014209	rbfox2	78	63.317	Poecilia_formosa
ENSONIG00000008341	-	86	77.465	ENSPFOG00000001869	-	100	78.310	Poecilia_formosa
ENSONIG00000008341	-	65	68.132	ENSPLAG00000017308	rbfox2	100	65.799	Poecilia_latipinna
ENSONIG00000008341	-	65	81.413	ENSPLAG00000002710	-	100	82.156	Poecilia_latipinna
ENSONIG00000008341	-	65	69.708	ENSPMEG00000007320	rbfox2	100	67.778	Poecilia_mexicana
ENSONIG00000008341	-	65	81.481	ENSPMEG00000013663	-	100	81.481	Poecilia_mexicana
ENSONIG00000008341	-	65	67.766	ENSPREG00000012955	rbfox2	100	66.418	Poecilia_reticulata
ENSONIG00000008341	-	90	64.171	ENSPPYG00000011766	RBFOX2	77	60.916	Pongo_abelii
ENSONIG00000008341	-	90	60.882	ENSPCOG00000016273	RBFOX2	92	56.906	Propithecus_coquereli
ENSONIG00000008341	-	64	70.956	ENSPVAG00000015844	RBFOX2	66	66.543	Pteropus_vampyrus
ENSONIG00000008341	-	99	82.555	ENSPNYG00000020595	-	88	84.557	Pundamilia_nyererei
ENSONIG00000008341	-	97	64.938	ENSPNYG00000016161	rbfox2	78	62.814	Pundamilia_nyererei
ENSONIG00000008341	-	97	58.924	ENSPNAG00000000168	rbfox2	77	56.750	Pygocentrus_nattereri
ENSONIG00000008341	-	77	68.224	ENSPNAG00000014196	-	66	63.636	Pygocentrus_nattereri
ENSONIG00000008341	-	90	64.658	ENSRNOG00000004688	Rbfox2	86	58.659	Rattus_norvegicus
ENSONIG00000008341	-	90	64.835	ENSRBIG00000033696	RBFOX2	91	61.433	Rhinopithecus_bieti
ENSONIG00000008341	-	97	62.624	ENSRROG00000035715	RBFOX2	96	58.491	Rhinopithecus_roxellana
ENSONIG00000008341	-	97	62.944	ENSSBOG00000028291	RBFOX2	92	61.157	Saimiri_boliviensis_boliviensis
ENSONIG00000008341	-	96	63.613	ENSSHAG00000006835	RBFOX2	87	62.088	Sarcophilus_harrisii
ENSONIG00000008341	-	65	64.662	ENSSFOG00015013291	-	74	70.815	Scleropages_formosus
ENSONIG00000008341	-	96	67.662	ENSSFOG00015010482	-	97	63.317	Scleropages_formosus
ENSONIG00000008341	-	99	74.755	ENSSMAG00000004317	-	87	74.690	Scophthalmus_maximus
ENSONIG00000008341	-	97	65.347	ENSSMAG00000013662	rbfox2	78	63.384	Scophthalmus_maximus
ENSONIG00000008341	-	97	66.089	ENSSDUG00000004292	rbfox2	78	64.232	Seriola_dumerili
ENSONIG00000008341	-	99	80.741	ENSSDUG00000009511	-	78	82.697	Seriola_dumerili
ENSONIG00000008341	-	80	63.855	ENSSLDG00000023983	rbfox2	62	64.706	Seriola_lalandi_dorsalis
ENSONIG00000008341	-	99	81.034	ENSSLDG00000018052	-	78	82.443	Seriola_lalandi_dorsalis
ENSONIG00000008341	-	68	60.517	ENSSPUG00000011797	RBFOX2	74	60.148	Sphenodon_punctatus
ENSONIG00000008341	-	97	65.679	ENSSPAG00000013681	rbfox2	78	63.980	Stegastes_partitus
ENSONIG00000008341	-	99	80.542	ENSSPAG00000016272	-	78	82.487	Stegastes_partitus
ENSONIG00000008341	-	97	60.099	ENSSSCG00000000152	RBFOX2	91	61.326	Sus_scrofa
ENSONIG00000008341	-	90	64.820	ENSTGUG00000010808	RBFOX2	93	61.453	Taeniopygia_guttata
ENSONIG00000008341	-	98	66.414	ENSTRUG00000007739	-	95	63.918	Takifugu_rubripes
ENSONIG00000008341	-	64	79.661	ENSTBEG00000003297	-	58	90.000	Tupaia_belangeri
ENSONIG00000008341	-	90	64.362	ENSTTRG00000006922	RBFOX2	93	61.067	Tursiops_truncatus
ENSONIG00000008341	-	87	62.810	ENSUAMG00000010612	RBFOX2	88	59.444	Ursus_americanus
ENSONIG00000008341	-	71	62.456	ENSUMAG00000016785	RBFOX2	73	61.922	Ursus_maritimus
ENSONIG00000008341	-	90	58.777	ENSVPAG00000002824	RBFOX2	93	56.533	Vicugna_pacos
ENSONIG00000008341	-	90	65.014	ENSVVUG00000023561	RBFOX2	92	61.067	Vulpes_vulpes
ENSONIG00000008341	-	85	62.953	ENSXETG00000000231	rbfox2	75	66.113	Xenopus_tropicalis
ENSONIG00000008341	-	61	61.719	ENSXCOG00000013643	rbfox2	100	60.317	Xiphophorus_couchianus
ENSONIG00000008341	-	66	97.674	ENSXCOG00000015905	-	84	97.674	Xiphophorus_couchianus
ENSONIG00000008341	-	99	77.451	ENSXMAG00000026769	-	79	79.293	Xiphophorus_maculatus
ENSONIG00000008341	-	96	64.865	ENSXMAG00000029498	rbfox2	90	63.317	Xiphophorus_maculatus