EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000008495 (Gene tree)
Gene ID: 100698039
Gene Symbol: cpsf4
Alias: -
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 6795 bases
Position: chrGL831154.1:3037083-3043877
Accession: 100698039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000010677	zf-CCCH	PF00642.24	7.9e-22	1	2
ENSONIP00000010677	zf-CCCH	PF00642.24	7.9e-22	2	2
ENSONIP00000010677	zf-CCHC	PF00098.23	3.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000010686	-	4753	-	ENSONIP00000010677	265 (aa)	XP_003443173	I3JP83

Gene Model

Click here to download ENSONIG00000008495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000008495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000008495	cpsf4	100	84.074	ENSG00000160917	CPSF4	100	98.214	Homo_sapiens
ENSONIG00000008495	cpsf4	67	86.441	ENSAPOG00000004921	cpsf4	100	86.441	Acanthochromis_polyacanthus
ENSONIG00000008495	cpsf4	100	83.704	ENSAMEG00000006252	CPSF4	100	83.704	Ailuropoda_melanoleuca
ENSONIG00000008495	cpsf4	100	88.679	ENSACIG00000009248	cpsf4	100	88.679	Amphilophus_citrinellus
ENSONIG00000008495	cpsf4	100	93.962	ENSAOCG00000019616	cpsf4	100	93.962	Amphiprion_ocellaris
ENSONIG00000008495	cpsf4	100	93.962	ENSAPEG00000011679	cpsf4	100	93.962	Amphiprion_percula
ENSONIG00000008495	cpsf4	100	93.633	ENSATEG00000007010	cpsf4	100	93.633	Anabas_testudineus
ENSONIG00000008495	cpsf4	100	82.593	ENSACAG00000012941	CPSF4	89	82.593	Anolis_carolinensis
ENSONIG00000008495	cpsf4	100	84.074	ENSANAG00000021360	CPSF4	100	84.074	Aotus_nancymaae
ENSONIG00000008495	cpsf4	100	99.245	ENSACLG00000010374	cpsf4	100	99.245	Astatotilapia_calliptera
ENSONIG00000008495	cpsf4	100	84.815	ENSAMXG00000031647	cpsf4	100	84.815	Astyanax_mexicanus
ENSONIG00000008495	cpsf4	100	79.245	ENSBTAG00000002090	CPSF4	100	79.245	Bos_taurus
ENSONIG00000008495	cpsf4	100	84.074	ENSCJAG00000015826	CPSF4	100	84.074	Callithrix_jacchus
ENSONIG00000008495	cpsf4	100	83.704	ENSCAFG00000015036	CPSF4	99	86.826	Canis_familiaris
ENSONIG00000008495	cpsf4	100	78.889	ENSCAFG00020014462	CPSF4	100	78.889	Canis_lupus_dingo
ENSONIG00000008495	cpsf4	100	83.333	ENSCHIG00000014313	CPSF4	100	83.333	Capra_hircus
ENSONIG00000008495	cpsf4	100	72.932	ENSTSYG00000014604	-	100	72.932	Carlito_syrichta
ENSONIG00000008495	cpsf4	89	74.262	ENSTSYG00000008195	-	99	74.390	Carlito_syrichta
ENSONIG00000008495	cpsf4	100	80.377	ENSTSYG00000005712	-	100	80.377	Carlito_syrichta
ENSONIG00000008495	cpsf4	81	83.562	ENSCAPG00000013881	CPSF4	87	83.562	Cavia_aperea
ENSONIG00000008495	cpsf4	100	80.000	ENSCPOG00000001783	CPSF4	100	80.000	Cavia_porcellus
ENSONIG00000008495	cpsf4	100	84.074	ENSCCAG00000028291	CPSF4	100	84.074	Cebus_capucinus
ENSONIG00000008495	cpsf4	100	84.074	ENSCATG00000038440	CPSF4	100	84.074	Cercocebus_atys
ENSONIG00000008495	cpsf4	100	83.704	ENSCLAG00000007050	CPSF4	100	83.704	Chinchilla_lanigera
ENSONIG00000008495	cpsf4	100	84.074	ENSCSAG00000017795	CPSF4	100	84.074	Chlorocebus_sabaeus
ENSONIG00000008495	cpsf4	80	82.949	ENSCPBG00000020869	CPSF4	100	82.949	Chrysemys_picta_bellii
ENSONIG00000008495	cpsf4	62	78.788	ENSCPBG00000010269	-	99	78.788	Chrysemys_picta_bellii
ENSONIG00000008495	cpsf4	97	56.250	ENSCING00000021080	-	97	56.250	Ciona_intestinalis
ENSONIG00000008495	cpsf4	96	55.160	ENSCSAVG00000011469	-	97	55.160	Ciona_savignyi
ENSONIG00000008495	cpsf4	100	84.074	ENSCANG00000019384	CPSF4	100	84.074	Colobus_angolensis_palliatus
ENSONIG00000008495	cpsf4	100	80.000	ENSCGRG00001024184	Cpsf4	100	80.000	Cricetulus_griseus_chok1gshd
ENSONIG00000008495	cpsf4	100	83.704	ENSCGRG00000013892	Cpsf4	100	83.704	Cricetulus_griseus_crigri
ENSONIG00000008495	cpsf4	100	93.208	ENSCSEG00000019055	cpsf4	100	93.208	Cynoglossus_semilaevis
ENSONIG00000008495	cpsf4	100	90.189	ENSCVAG00000016528	cpsf4	100	90.189	Cyprinodon_variegatus
ENSONIG00000008495	cpsf4	100	84.502	ENSDARG00000020217	cpsf4	100	84.502	Danio_rerio
ENSONIG00000008495	cpsf4	100	83.704	ENSDNOG00000006344	CPSF4	100	83.704	Dasypus_novemcinctus
ENSONIG00000008495	cpsf4	80	83.028	ENSDORG00000000742	Cpsf4	100	83.028	Dipodomys_ordii
ENSONIG00000008495	cpsf4	100	54.515	FBgn0015621	Clp	99	54.515	Drosophila_melanogaster
ENSONIG00000008495	cpsf4	71	95.455	ENSETEG00000002608	CPSF4	70	95.455	Echinops_telfairi
ENSONIG00000008495	cpsf4	99	64.419	ENSEBUG00000012552	cpsf4	98	64.419	Eptatretus_burgeri
ENSONIG00000008495	cpsf4	100	80.000	ENSEASG00005002487	CPSF4	100	80.000	Equus_asinus_asinus
ENSONIG00000008495	cpsf4	100	83.704	ENSECAG00000007525	CPSF4	100	83.704	Equus_caballus
ENSONIG00000008495	cpsf4	63	94.030	ENSEEUG00000002158	CPSF4	73	94.030	Erinaceus_europaeus
ENSONIG00000008495	cpsf4	100	86.397	ENSELUG00000011481	cpsf4	100	86.397	Esox_lucius
ENSONIG00000008495	cpsf4	100	83.704	ENSFCAG00000015070	CPSF4	100	83.704	Felis_catus
ENSONIG00000008495	cpsf4	62	55.814	ENSFALG00000012906	-	100	55.814	Ficedula_albicollis
ENSONIG00000008495	cpsf4	100	79.245	ENSFALG00000013799	CPSF4	100	79.245	Ficedula_albicollis
ENSONIG00000008495	cpsf4	90	82.787	ENSFDAG00000014092	CPSF4	100	82.787	Fukomys_damarensis
ENSONIG00000008495	cpsf4	100	90.189	ENSFHEG00000010880	cpsf4	100	90.189	Fundulus_heteroclitus
ENSONIG00000008495	cpsf4	100	82.288	ENSGMOG00000002330	cpsf4	100	82.288	Gadus_morhua
ENSONIG00000008495	cpsf4	100	79.623	ENSGALG00000004714	CPSF4	100	79.623	Gallus_gallus
ENSONIG00000008495	cpsf4	99	36.066	ENSGALG00000004441	-	98	36.066	Gallus_gallus
ENSONIG00000008495	cpsf4	100	89.057	ENSGAFG00000010580	cpsf4	100	89.057	Gambusia_affinis
ENSONIG00000008495	cpsf4	100	85.821	ENSGACG00000007792	cpsf4	100	85.821	Gasterosteus_aculeatus
ENSONIG00000008495	cpsf4	69	75.275	ENSGAGG00000020579	-	100	75.275	Gopherus_agassizii
ENSONIG00000008495	cpsf4	100	84.074	ENSGAGG00000021835	CPSF4	100	84.074	Gopherus_agassizii
ENSONIG00000008495	cpsf4	100	84.074	ENSGGOG00000015131	CPSF4	100	84.074	Gorilla_gorilla
ENSONIG00000008495	cpsf4	100	99.245	ENSHBUG00000013699	cpsf4	100	99.245	Haplochromis_burtoni
ENSONIG00000008495	cpsf4	100	83.026	ENSHGLG00000017150	CPSF4	100	83.026	Heterocephalus_glaber_female
ENSONIG00000008495	cpsf4	87	80.508	ENSHGLG00100009215	-	100	80.508	Heterocephalus_glaber_male
ENSONIG00000008495	cpsf4	67	63.842	ENSHGLG00100017302	-	89	64.211	Heterocephalus_glaber_male
ENSONIG00000008495	cpsf4	100	89.098	ENSHCOG00000004397	cpsf4	100	89.098	Hippocampus_comes
ENSONIG00000008495	cpsf4	100	82.288	ENSIPUG00000017147	cpsf4	100	83.395	Ictalurus_punctatus
ENSONIG00000008495	cpsf4	100	83.704	ENSSTOG00000001688	CPSF4	100	83.704	Ictidomys_tridecemlineatus
ENSONIG00000008495	cpsf4	100	83.704	ENSJJAG00000019426	Cpsf4	100	83.704	Jaculus_jaculus
ENSONIG00000008495	cpsf4	100	89.811	ENSKMAG00000015642	cpsf4	100	89.811	Kryptolebias_marmoratus
ENSONIG00000008495	cpsf4	100	83.026	ENSLACG00000010938	CPSF4	100	83.026	Latimeria_chalumnae
ENSONIG00000008495	cpsf4	100	60.526	ENSLACG00000018470	-	100	60.526	Latimeria_chalumnae
ENSONIG00000008495	cpsf4	100	80.741	ENSLOCG00000004814	cpsf4	100	82.156	Lepisosteus_oculatus
ENSONIG00000008495	cpsf4	100	84.074	ENSLAFG00000000159	CPSF4	100	84.074	Loxodonta_africana
ENSONIG00000008495	cpsf4	100	84.074	ENSMFAG00000001462	CPSF4	100	84.074	Macaca_fascicularis
ENSONIG00000008495	cpsf4	100	84.074	ENSMMUG00000019191	CPSF4	100	84.074	Macaca_mulatta
ENSONIG00000008495	cpsf4	100	84.074	ENSMNEG00000032306	CPSF4	100	84.074	Macaca_nemestrina
ENSONIG00000008495	cpsf4	100	84.074	ENSMLEG00000034721	CPSF4	100	84.074	Mandrillus_leucophaeus
ENSONIG00000008495	cpsf4	100	93.609	ENSMAMG00000006244	cpsf4	100	93.609	Mastacembelus_armatus
ENSONIG00000008495	cpsf4	100	99.245	ENSMZEG00005007515	cpsf4	100	99.245	Maylandia_zebra
ENSONIG00000008495	cpsf4	87	77.922	ENSMGAG00000004235	CPSF4	100	77.922	Meleagris_gallopavo
ENSONIG00000008495	cpsf4	100	83.704	ENSMAUG00000021253	Cpsf4	100	83.704	Mesocricetus_auratus
ENSONIG00000008495	cpsf4	100	84.074	ENSMICG00000017429	CPSF4	100	84.074	Microcebus_murinus
ENSONIG00000008495	cpsf4	100	83.704	ENSMOCG00000014901	Cpsf4	100	83.704	Microtus_ochrogaster
ENSONIG00000008495	cpsf4	100	91.729	ENSMMOG00000001813	cpsf4	100	91.729	Mola_mola
ENSONIG00000008495	cpsf4	100	85.185	ENSMODG00000001367	CPSF4	100	85.185	Monodelphis_domestica
ENSONIG00000008495	cpsf4	100	92.481	ENSMALG00000012611	cpsf4	100	92.481	Monopterus_albus
ENSONIG00000008495	cpsf4	100	83.704	MGP_CAROLIEiJ_G0028012	Cpsf4	100	83.704	Mus_caroli
ENSONIG00000008495	cpsf4	100	83.704	ENSMUSG00000029625	Cpsf4	100	83.704	Mus_musculus
ENSONIG00000008495	cpsf4	100	83.704	MGP_PahariEiJ_G0024581	Cpsf4	100	83.704	Mus_pahari
ENSONIG00000008495	cpsf4	100	84.074	MGP_SPRETEiJ_G0029013	Cpsf4	100	84.074	Mus_spretus
ENSONIG00000008495	cpsf4	100	83.704	ENSMPUG00000016508	CPSF4	100	83.704	Mustela_putorius_furo
ENSONIG00000008495	cpsf4	87	77.922	ENSMLUG00000010980	CPSF4	100	77.922	Myotis_lucifugus
ENSONIG00000008495	cpsf4	100	83.704	ENSNGAG00000001567	Cpsf4	100	83.704	Nannospalax_galili
ENSONIG00000008495	cpsf4	91	98.340	ENSNBRG00000003943	cpsf4	98	98.340	Neolamprologus_brichardi
ENSONIG00000008495	cpsf4	100	82.090	ENSNLEG00000011074	CPSF4	100	82.090	Nomascus_leucogenys
ENSONIG00000008495	cpsf4	100	85.185	ENSMEUG00000006955	CPSF4	100	85.185	Notamacropus_eugenii
ENSONIG00000008495	cpsf4	100	83.333	ENSOPRG00000013663	CPSF4	100	83.333	Ochotona_princeps
ENSONIG00000008495	cpsf4	98	68.582	ENSODEG00000018283	-	91	68.582	Octodon_degus
ENSONIG00000008495	cpsf4	100	64.576	ENSODEG00000009779	-	100	64.576	Octodon_degus
ENSONIG00000008495	cpsf4	100	83.704	ENSODEG00000011181	-	100	83.704	Octodon_degus
ENSONIG00000008495	cpsf4	87	82.979	ENSOANG00000007729	CPSF4	100	82.979	Ornithorhynchus_anatinus
ENSONIG00000008495	cpsf4	100	52.518	ENSOANG00000009568	-	100	52.518	Ornithorhynchus_anatinus
ENSONIG00000008495	cpsf4	100	83.333	ENSOCUG00000002437	CPSF4	70	83.333	Oryctolagus_cuniculus
ENSONIG00000008495	cpsf4	100	92.075	ENSORLG00000022798	cpsf4	100	92.075	Oryzias_latipes
ENSONIG00000008495	cpsf4	100	92.075	ENSORLG00020008548	cpsf4	100	92.075	Oryzias_latipes_hni
ENSONIG00000008495	cpsf4	100	91.698	ENSORLG00015019575	cpsf4	100	91.698	Oryzias_latipes_hsok
ENSONIG00000008495	cpsf4	100	91.698	ENSOMEG00000005176	cpsf4	100	91.698	Oryzias_melastigma
ENSONIG00000008495	cpsf4	100	84.074	ENSOGAG00000010884	CPSF4	100	84.074	Otolemur_garnettii
ENSONIG00000008495	cpsf4	100	73.358	ENSOARG00000018668	CPSF4	100	73.358	Ovis_aries
ENSONIG00000008495	cpsf4	100	84.074	ENSPPAG00000043355	CPSF4	100	84.074	Pan_paniscus
ENSONIG00000008495	cpsf4	100	83.704	ENSPPRG00000003134	CPSF4	100	83.704	Panthera_pardus
ENSONIG00000008495	cpsf4	90	83.539	ENSPTIG00000005604	CPSF4	90	83.539	Panthera_tigris_altaica
ENSONIG00000008495	cpsf4	100	84.074	ENSPTRG00000019453	CPSF4	100	84.074	Pan_troglodytes
ENSONIG00000008495	cpsf4	100	84.074	ENSPANG00000023123	CPSF4	100	84.074	Papio_anubis
ENSONIG00000008495	cpsf4	100	83.212	ENSPKIG00000014278	cpsf4	100	83.212	Paramormyrops_kingsleyae
ENSONIG00000008495	cpsf4	81	59.813	ENSPSIG00000018198	-	100	59.813	Pelodiscus_sinensis
ENSONIG00000008495	cpsf4	80	82.488	ENSPSIG00000011229	CPSF4	100	82.488	Pelodiscus_sinensis
ENSONIG00000008495	cpsf4	100	80.755	ENSPMGG00000017735	cpsf4	100	80.755	Periophthalmus_magnuspinnatus
ENSONIG00000008495	cpsf4	100	83.704	ENSPEMG00000004508	Cpsf4	100	83.704	Peromyscus_maniculatus_bairdii
ENSONIG00000008495	cpsf4	100	85.185	ENSPCIG00000024776	CPSF4	100	85.185	Phascolarctos_cinereus
ENSONIG00000008495	cpsf4	100	89.057	ENSPFOG00000014912	cpsf4	100	89.057	Poecilia_formosa
ENSONIG00000008495	cpsf4	100	81.887	ENSPLAG00000009599	cpsf4	100	81.887	Poecilia_latipinna
ENSONIG00000008495	cpsf4	100	89.057	ENSPMEG00000009790	cpsf4	100	89.057	Poecilia_mexicana
ENSONIG00000008495	cpsf4	100	88.679	ENSPREG00000018166	cpsf4	100	88.679	Poecilia_reticulata
ENSONIG00000008495	cpsf4	87	82.979	ENSPPYG00000017378	CPSF4	100	82.979	Pongo_abelii
ENSONIG00000008495	cpsf4	100	84.074	ENSPCAG00000001892	CPSF4	100	84.074	Procavia_capensis
ENSONIG00000008495	cpsf4	100	83.704	ENSPCOG00000012771	CPSF4	100	83.704	Propithecus_coquereli
ENSONIG00000008495	cpsf4	100	78.519	ENSPVAG00000007531	CPSF4	100	78.519	Pteropus_vampyrus
ENSONIG00000008495	cpsf4	100	99.245	ENSPNYG00000018559	cpsf4	100	99.245	Pundamilia_nyererei
ENSONIG00000008495	cpsf4	100	85.556	ENSPNAG00000003736	cpsf4	100	85.556	Pygocentrus_nattereri
ENSONIG00000008495	cpsf4	100	79.623	ENSRNOG00000000985	Cpsf4	100	79.623	Rattus_norvegicus
ENSONIG00000008495	cpsf4	87	83.404	ENSRBIG00000033886	CPSF4	100	83.404	Rhinopithecus_bieti
ENSONIG00000008495	cpsf4	100	80.377	ENSRROG00000040431	CPSF4	100	80.377	Rhinopithecus_roxellana
ENSONIG00000008495	cpsf4	100	84.074	ENSSBOG00000020493	CPSF4	100	84.074	Saimiri_boliviensis_boliviensis
ENSONIG00000008495	cpsf4	100	85.185	ENSSHAG00000011533	CPSF4	100	85.185	Sarcophilus_harrisii
ENSONIG00000008495	cpsf4	100	82.246	ENSSFOG00015007883	cpsf4	100	82.246	Scleropages_formosus
ENSONIG00000008495	cpsf4	100	85.283	ENSSMAG00000006374	cpsf4	100	85.283	Scophthalmus_maximus
ENSONIG00000008495	cpsf4	100	94.737	ENSSDUG00000018887	cpsf4	100	94.737	Seriola_dumerili
ENSONIG00000008495	cpsf4	100	94.737	ENSSLDG00000019078	cpsf4	100	94.737	Seriola_lalandi_dorsalis
ENSONIG00000008495	cpsf4	87	83.404	ENSSARG00000012416	CPSF4	100	83.404	Sorex_araneus
ENSONIG00000008495	cpsf4	100	82.593	ENSSPUG00000003549	CPSF4	100	82.593	Sphenodon_punctatus
ENSONIG00000008495	cpsf4	96	59.055	ENSSPUG00000014803	-	97	59.055	Sphenodon_punctatus
ENSONIG00000008495	cpsf4	100	87.170	ENSSPAG00000006174	cpsf4	100	87.170	Stegastes_partitus
ENSONIG00000008495	cpsf4	100	80.377	ENSSSCG00000026896	CPSF4	100	80.377	Sus_scrofa
ENSONIG00000008495	cpsf4	100	78.277	ENSTGUG00000007552	CPSF4	100	78.277	Taeniopygia_guttata
ENSONIG00000008495	cpsf4	100	88.302	ENSTRUG00000024220	cpsf4	100	88.302	Takifugu_rubripes
ENSONIG00000008495	cpsf4	100	89.811	ENSTNIG00000006265	cpsf4	100	89.811	Tetraodon_nigroviridis
ENSONIG00000008495	cpsf4	87	74.894	ENSTBEG00000011406	CPSF4	100	74.894	Tupaia_belangeri
ENSONIG00000008495	cpsf4	100	72.862	ENSTTRG00000003007	CPSF4	100	72.862	Tursiops_truncatus
ENSONIG00000008495	cpsf4	92	78.189	ENSUAMG00000008051	CPSF4	85	78.189	Ursus_americanus
ENSONIG00000008495	cpsf4	100	79.623	ENSUMAG00000009474	CPSF4	100	79.623	Ursus_maritimus
ENSONIG00000008495	cpsf4	100	80.000	ENSVVUG00000008824	CPSF4	100	80.000	Vulpes_vulpes
ENSONIG00000008495	cpsf4	99	58.209	ENSXETG00000004641	cpsf4l	99	58.209	Xenopus_tropicalis
ENSONIG00000008495	cpsf4	100	77.778	ENSXETG00000009892	cpsf4	100	77.778	Xenopus_tropicalis
ENSONIG00000008495	cpsf4	100	88.679	ENSXCOG00000016040	cpsf4	100	88.679	Xiphophorus_couchianus
ENSONIG00000008495	cpsf4	100	89.057	ENSXMAG00000024670	cpsf4	100	89.057	Xiphophorus_maculatus