EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSONIG00000008499 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 10298 bases
Position: chrGL831187.1:269271-279568
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000010683	zf-CCCH	PF00642.24	2.2e-08	1	1
ENSONIP00000010683	zf-CCCH_2	PF14608.6	1.1e-05	1	4
ENSONIP00000010683	zf-CCCH_2	PF14608.6	1.1e-05	2	4
ENSONIP00000010683	zf-CCCH_2	PF14608.6	1.1e-05	3	4
ENSONIP00000010683	zf-CCCH_2	PF14608.6	1.1e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000010692	-	1167	-	ENSONIP00000010683	389 (aa)	-	I3JP89
ENSONIT00000010693	-	1119	-	ENSONIP00000010684	341 (aa)	-	I3JP90

Gene Model

Click here to download ENSONIG00000008499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000008499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000008499	-	96	60.363	ENSONIG00000003561	MBNL1	96	62.176
ENSONIG00000008499	-	95	58.556	ENSONIG00000005428	mbnl3	100	57.487
ENSONIG00000008499	-	98	63.683	ENSONIG00000010043	mbnl1	95	62.916
ENSONIG00000008499	-	96	78.191	ENSONIG00000012173	mbnl2	99	78.723