EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000009061 (Gene tree)
Gene ID: -
Gene Symbol: rbm47
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 8081 bases
Position: chrGL831245.1:2349436-2357516
Accession: ZDB-GENE-030131-9612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000011396	RRM_1	PF00076.22	1.8e-40	1	3
ENSONIP00000011396	RRM_1	PF00076.22	1.8e-40	2	3
ENSONIP00000011396	RRM_1	PF00076.22	1.8e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000011405	-	1827	-	ENSONIP00000011396	608 (aa)	-	I3JRA2

Gene Model

Click here to download ENSONIG00000009061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000009061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000009061	rbm47	50	54.248	ENSONIG00000019692	hnrnpr	67	45.433
ENSONIG00000009061	rbm47	76	51.040	ENSONIG00000019105	a1cf	87	52.852

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000009061	rbm47	94	84.551	ENSG00000163694	RBM47	100	81.795	Homo_sapiens
ENSONIG00000009061	rbm47	100	92.810	ENSAPOG00000011062	rbm47	100	95.887	Acanthochromis_polyacanthus
ENSONIG00000009061	rbm47	94	75.559	ENSAMEG00000009672	RBM47	100	75.000	Ailuropoda_melanoleuca
ENSONIG00000009061	rbm47	100	94.079	ENSACIG00000011531	rbm47	100	94.079	Amphilophus_citrinellus
ENSONIG00000009061	rbm47	100	94.581	ENSAOCG00000022245	rbm47	100	95.630	Amphiprion_ocellaris
ENSONIG00000009061	rbm47	100	94.253	ENSAPEG00000018304	rbm47	100	95.630	Amphiprion_percula
ENSONIG00000009061	rbm47	100	93.421	ENSATEG00000018400	rbm47	100	93.421	Anabas_testudineus
ENSONIG00000009061	rbm47	100	75.204	ENSAPLG00000013974	RBM47	100	75.204	Anas_platyrhynchos
ENSONIG00000009061	rbm47	100	74.104	ENSACAG00000011833	RBM47	100	74.959	Anolis_carolinensis
ENSONIG00000009061	rbm47	100	80.612	ENSANAG00000029440	RBM47	100	81.538	Aotus_nancymaae
ENSONIG00000009061	rbm47	100	97.218	ENSACLG00000016902	rbm47	100	97.218	Astatotilapia_calliptera
ENSONIG00000009061	rbm47	100	82.410	ENSAMXG00000021794	rbm47	100	82.573	Astyanax_mexicanus
ENSONIG00000009061	rbm47	100	75.286	ENSBTAG00000002356	RBM47	100	76.596	Bos_taurus
ENSONIG00000009061	rbm47	94	85.154	ENSCJAG00000019385	RBM47	100	81.538	Callithrix_jacchus
ENSONIG00000009061	rbm47	94	77.003	ENSCAFG00000015898	RBM47	100	75.614	Canis_familiaris
ENSONIG00000009061	rbm47	80	79.226	ENSCAFG00020010558	RBM47	94	80.513	Canis_lupus_dingo
ENSONIG00000009061	rbm47	100	75.286	ENSCHIG00000026214	RBM47	100	76.596	Capra_hircus
ENSONIG00000009061	rbm47	84	87.444	ENSTSYG00000033612	RBM47	93	86.283	Carlito_syrichta
ENSONIG00000009061	rbm47	100	70.164	ENSCAPG00000008426	RBM47	100	72.494	Cavia_aperea
ENSONIG00000009061	rbm47	100	80.357	ENSCPOG00000014100	RBM47	100	81.538	Cavia_porcellus
ENSONIG00000009061	rbm47	99	54.501	ENSCCAG00000024397	-	99	54.828	Cebus_capucinus
ENSONIG00000009061	rbm47	100	81.795	ENSCCAG00000030129	-	100	81.538	Cebus_capucinus
ENSONIG00000009061	rbm47	94	84.551	ENSCATG00000042064	RBM47	100	81.795	Cercocebus_atys
ENSONIG00000009061	rbm47	94	85.434	ENSCLAG00000001684	RBM47	100	81.538	Chinchilla_lanigera
ENSONIG00000009061	rbm47	94	76.471	ENSCSAG00000017060	RBM47	100	75.733	Chlorocebus_sabaeus
ENSONIG00000009061	rbm47	83	76.596	ENSCHOG00000011731	RBM47	88	75.000	Choloepus_hoffmanni
ENSONIG00000009061	rbm47	100	77.488	ENSCPBG00000013831	RBM47	100	78.176	Chrysemys_picta_bellii
ENSONIG00000009061	rbm47	94	85.434	ENSCANG00000019997	RBM47	100	81.795	Colobus_angolensis_palliatus
ENSONIG00000009061	rbm47	100	80.818	ENSCGRG00001000623	-	100	81.841	Cricetulus_griseus_chok1gshd
ENSONIG00000009061	rbm47	100	75.765	ENSCGRG00001020102	-	100	77.296	Cricetulus_griseus_chok1gshd
ENSONIG00000009061	rbm47	100	75.510	ENSCGRG00000014760	-	96	82.073	Cricetulus_griseus_crigri
ENSONIG00000009061	rbm47	100	73.377	ENSCGRG00000007762	-	100	76.879	Cricetulus_griseus_crigri
ENSONIG00000009061	rbm47	94	90.418	ENSCSEG00000004545	rbm47	100	87.049	Cynoglossus_semilaevis
ENSONIG00000009061	rbm47	100	90.476	ENSCVAG00000020144	rbm47	100	93.830	Cyprinodon_variegatus
ENSONIG00000009061	rbm47	100	82.843	ENSDARG00000061985	rbm47	100	83.497	Danio_rerio
ENSONIG00000009061	rbm47	94	77.257	ENSDNOG00000046854	RBM47	100	76.268	Dasypus_novemcinctus
ENSONIG00000009061	rbm47	100	74.230	ENSDORG00000010144	Rbm47	100	75.283	Dipodomys_ordii
ENSONIG00000009061	rbm47	94	76.936	ENSETEG00000009194	RBM47	100	75.566	Echinops_telfairi
ENSONIG00000009061	rbm47	95	58.179	ENSEBUG00000011912	rbm47	98	58.347	Eptatretus_burgeri
ENSONIG00000009061	rbm47	94	77.778	ENSEASG00005008443	RBM47	100	76.432	Equus_asinus_asinus
ENSONIG00000009061	rbm47	94	77.778	ENSECAG00000004400	RBM47	100	76.432	Equus_caballus
ENSONIG00000009061	rbm47	70	88.571	ENSEEUG00000001194	RBM47	75	81.224	Erinaceus_europaeus
ENSONIG00000009061	rbm47	100	87.879	ENSELUG00000006148	rbm47	100	87.879	Esox_lucius
ENSONIG00000009061	rbm47	94	77.565	ENSFCAG00000012399	RBM47	100	76.885	Felis_catus
ENSONIG00000009061	rbm47	100	77.162	ENSFALG00000002861	RBM47	100	77.977	Ficedula_albicollis
ENSONIG00000009061	rbm47	100	79.744	ENSFDAG00000016326	RBM47	100	79.231	Fukomys_damarensis
ENSONIG00000009061	rbm47	100	88.487	ENSFHEG00000007938	rbm47	100	88.322	Fundulus_heteroclitus
ENSONIG00000009061	rbm47	100	82.848	ENSGMOG00000014802	rbm47	100	82.848	Gadus_morhua
ENSONIG00000009061	rbm47	64	82.864	ENSGALG00000014267	RBM47	99	82.609	Gallus_gallus
ENSONIG00000009061	rbm47	64	88.918	ENSGAFG00000020571	rbm47	98	88.918	Gambusia_affinis
ENSONIG00000009061	rbm47	100	89.984	ENSGACG00000016223	rbm47	100	89.984	Gasterosteus_aculeatus
ENSONIG00000009061	rbm47	100	77.488	ENSGAGG00000020051	RBM47	100	78.176	Gopherus_agassizii
ENSONIG00000009061	rbm47	94	84.551	ENSGGOG00000001367	RBM47	100	81.795	Gorilla_gorilla
ENSONIG00000009061	rbm47	100	96.737	ENSHBUG00000003520	rbm47	100	96.737	Haplochromis_burtoni
ENSONIG00000009061	rbm47	85	63.333	ENSHGLG00000016914	RBM47	100	76.301	Heterocephalus_glaber_female
ENSONIG00000009061	rbm47	100	68.033	ENSHGLG00100003071	-	100	67.541	Heterocephalus_glaber_male
ENSONIG00000009061	rbm47	100	80.769	ENSHGLG00100014028	-	100	80.513	Heterocephalus_glaber_male
ENSONIG00000009061	rbm47	99	90.759	ENSHCOG00000002074	rbm47	99	90.594	Hippocampus_comes
ENSONIG00000009061	rbm47	100	82.979	ENSIPUG00000004743	rbm47	100	83.633	Ictalurus_punctatus
ENSONIG00000009061	rbm47	94	76.684	ENSSTOG00000004727	RBM47	100	77.805	Ictidomys_tridecemlineatus
ENSONIG00000009061	rbm47	94	77.029	ENSJJAG00000013823	Rbm47	100	75.081	Jaculus_jaculus
ENSONIG00000009061	rbm47	100	91.148	ENSKMAG00000000084	rbm47	100	93.333	Kryptolebias_marmoratus
ENSONIG00000009061	rbm47	100	93.103	ENSLBEG00000008436	rbm47	100	93.103	Labrus_bergylta
ENSONIG00000009061	rbm47	94	80.382	ENSLACG00000007196	RBM47	100	77.778	Latimeria_chalumnae
ENSONIG00000009061	rbm47	94	83.478	ENSLOCG00000012966	rbm47	95	80.882	Lepisosteus_oculatus
ENSONIG00000009061	rbm47	100	74.551	ENSLAFG00000011998	RBM47	100	75.856	Loxodonta_africana
ENSONIG00000009061	rbm47	94	84.551	ENSMFAG00000037967	RBM47	100	81.795	Macaca_fascicularis
ENSONIG00000009061	rbm47	94	76.471	ENSMMUG00000012036	RBM47	100	79.327	Macaca_mulatta
ENSONIG00000009061	rbm47	94	84.551	ENSMNEG00000040774	RBM47	100	82.097	Macaca_nemestrina
ENSONIG00000009061	rbm47	94	88.095	ENSMLEG00000041432	RBM47	100	83.030	Mandrillus_leucophaeus
ENSONIG00000009061	rbm47	100	93.750	ENSMAMG00000019143	rbm47	99	95.619	Mastacembelus_armatus
ENSONIG00000009061	rbm47	100	97.218	ENSMZEG00005023659	rbm47	100	97.218	Maylandia_zebra
ENSONIG00000009061	rbm47	100	76.585	ENSMGAG00000012226	RBM47	100	77.435	Meleagris_gallopavo
ENSONIG00000009061	rbm47	100	80.102	ENSMAUG00000006493	Rbm47	100	81.122	Mesocricetus_auratus
ENSONIG00000009061	rbm47	94	81.921	ENSMICG00000026417	RBM47	96	85.552	Microcebus_murinus
ENSONIG00000009061	rbm47	100	80.051	ENSMOCG00000021170	Rbm47	100	81.074	Microtus_ochrogaster
ENSONIG00000009061	rbm47	100	91.612	ENSMMOG00000007260	rbm47	100	91.447	Mola_mola
ENSONIG00000009061	rbm47	51	77.848	ENSMODG00000015426	-	98	77.848	Monodelphis_domestica
ENSONIG00000009061	rbm47	100	71.475	ENSMODG00000020561	-	100	71.639	Monodelphis_domestica
ENSONIG00000009061	rbm47	100	76.020	ENSMODG00000007003	RBM47	100	76.634	Monodelphis_domestica
ENSONIG00000009061	rbm47	100	91.776	ENSMALG00000005167	rbm47	100	93.299	Monopterus_albus
ENSONIG00000009061	rbm47	100	79.540	MGP_CAROLIEiJ_G0027258	Rbm47	96	85.955	Mus_caroli
ENSONIG00000009061	rbm47	100	79.540	ENSMUSG00000070780	Rbm47	96	85.955	Mus_musculus
ENSONIG00000009061	rbm47	100	79.795	MGP_PahariEiJ_G0017040	Rbm47	96	86.236	Mus_pahari
ENSONIG00000009061	rbm47	100	79.540	MGP_SPRETEiJ_G0028253	Rbm47	96	85.955	Mus_spretus
ENSONIG00000009061	rbm47	94	76.471	ENSMPUG00000006177	RBM47	94	75.530	Mustela_putorius_furo
ENSONIG00000009061	rbm47	100	74.837	ENSMLUG00000000889	RBM47	100	75.654	Myotis_lucifugus
ENSONIG00000009061	rbm47	100	73.984	ENSNGAG00000003325	Rbm47	100	74.797	Nannospalax_galili
ENSONIG00000009061	rbm47	100	97.222	ENSNBRG00000015092	rbm47	100	97.222	Neolamprologus_brichardi
ENSONIG00000009061	rbm47	94	84.551	ENSNLEG00000017151	RBM47	100	81.795	Nomascus_leucogenys
ENSONIG00000009061	rbm47	69	80.189	ENSMEUG00000009516	-	99	80.189	Notamacropus_eugenii
ENSONIG00000009061	rbm47	76	85.477	ENSOPRG00000016507	-	75	85.950	Ochotona_princeps
ENSONIG00000009061	rbm47	94	77.391	ENSODEG00000004873	RBM47	100	75.738	Octodon_degus
ENSONIG00000009061	rbm47	100	76.230	ENSOANG00000008978	RBM47	100	76.885	Ornithorhynchus_anatinus
ENSONIG00000009061	rbm47	100	74.754	ENSOCUG00000012034	RBM47	96	79.304	Oryctolagus_cuniculus
ENSONIG00000009061	rbm47	100	90.969	ENSORLG00000005847	rbm47	100	90.476	Oryzias_latipes
ENSONIG00000009061	rbm47	100	90.805	ENSORLG00020005154	rbm47	100	90.312	Oryzias_latipes_hni
ENSONIG00000009061	rbm47	100	90.969	ENSORLG00015000066	rbm47	100	90.640	Oryzias_latipes_hsok
ENSONIG00000009061	rbm47	100	91.118	ENSOMEG00000010730	rbm47	100	90.789	Oryzias_melastigma
ENSONIG00000009061	rbm47	94	76.298	ENSOGAG00000029367	-	100	75.367	Otolemur_garnettii
ENSONIG00000009061	rbm47	94	70.783	ENSOGAG00000025193	-	100	70.000	Otolemur_garnettii
ENSONIG00000009061	rbm47	100	67.594	ENSOARG00000012711	RBM47	100	68.903	Ovis_aries
ENSONIG00000009061	rbm47	94	76.829	ENSPPAG00000029763	RBM47	95	81.795	Pan_paniscus
ENSONIG00000009061	rbm47	94	84.680	ENSPPRG00000012873	RBM47	100	81.538	Panthera_pardus
ENSONIG00000009061	rbm47	83	75.296	ENSPTIG00000017046	RBM47	100	75.692	Panthera_tigris_altaica
ENSONIG00000009061	rbm47	94	84.551	ENSPTRG00000016006	RBM47	100	81.795	Pan_troglodytes
ENSONIG00000009061	rbm47	94	84.551	ENSPANG00000005980	RBM47	100	81.795	Papio_anubis
ENSONIG00000009061	rbm47	95	87.744	ENSPKIG00000005037	rbm47	100	77.578	Paramormyrops_kingsleyae
ENSONIG00000009061	rbm47	94	77.431	ENSPKIG00000013431	RBM47	98	83.846	Paramormyrops_kingsleyae
ENSONIG00000009061	rbm47	89	78.860	ENSPSIG00000017516	RBM47	97	78.860	Pelodiscus_sinensis
ENSONIG00000009061	rbm47	94	91.404	ENSPMGG00000018540	rbm47	100	87.500	Periophthalmus_magnuspinnatus
ENSONIG00000009061	rbm47	100	80.051	ENSPEMG00000011088	Rbm47	100	81.074	Peromyscus_maniculatus_bairdii
ENSONIG00000009061	rbm47	100	88.889	ENSPFOG00000007997	rbm47	100	88.889	Poecilia_formosa
ENSONIG00000009061	rbm47	100	88.871	ENSPLAG00000002072	rbm47	100	88.871	Poecilia_latipinna
ENSONIG00000009061	rbm47	100	88.889	ENSPMEG00000017492	rbm47	100	91.517	Poecilia_mexicana
ENSONIG00000009061	rbm47	100	89.034	ENSPREG00000008456	rbm47	100	91.517	Poecilia_reticulata
ENSONIG00000009061	rbm47	94	67.925	ENSPPYG00000014688	RBM47	98	68.836	Pongo_abelii
ENSONIG00000009061	rbm47	82	79.518	ENSPCAG00000011879	RBM47	81	81.205	Procavia_capensis
ENSONIG00000009061	rbm47	94	84.225	ENSPCOG00000023451	RBM47	100	80.513	Propithecus_coquereli
ENSONIG00000009061	rbm47	94	76.379	ENSPVAG00000003812	RBM47	100	75.407	Pteropus_vampyrus
ENSONIG00000009061	rbm47	100	96.580	ENSPNYG00000022868	rbm47	100	96.580	Pundamilia_nyererei
ENSONIG00000009061	rbm47	100	83.388	ENSPNAG00000007940	rbm47	100	84.365	Pygocentrus_nattereri
ENSONIG00000009061	rbm47	100	73.779	ENSRNOG00000002408	Rbm47	100	75.407	Rattus_norvegicus
ENSONIG00000009061	rbm47	94	85.434	ENSRBIG00000039601	RBM47	100	81.795	Rhinopithecus_bieti
ENSONIG00000009061	rbm47	94	85.434	ENSRROG00000044696	RBM47	100	81.795	Rhinopithecus_roxellana
ENSONIG00000009061	rbm47	100	72.459	ENSSBOG00000028475	RBM47	100	78.200	Saimiri_boliviensis_boliviensis
ENSONIG00000009061	rbm47	100	76.066	ENSSHAG00000017576	RBM47	100	76.721	Sarcophilus_harrisii
ENSONIG00000009061	rbm47	94	84.439	ENSSFOG00015012445	rbm47	100	77.541	Scleropages_formosus
ENSONIG00000009061	rbm47	98	78.369	ENSSFOG00015024101	RBM47	98	79.623	Scleropages_formosus
ENSONIG00000009061	rbm47	100	91.118	ENSSMAG00000009744	rbm47	100	92.010	Scophthalmus_maximus
ENSONIG00000009061	rbm47	100	93.475	ENSSDUG00000022684	rbm47	100	93.312	Seriola_dumerili
ENSONIG00000009061	rbm47	100	92.985	ENSSLDG00000003109	rbm47	100	93.384	Seriola_lalandi_dorsalis
ENSONIG00000009061	rbm47	85	76.940	ENSSARG00000001735	RBM47	75	79.140	Sorex_araneus
ENSONIG00000009061	rbm47	100	81.934	ENSSPUG00000007515	RBM47	100	81.934	Sphenodon_punctatus
ENSONIG00000009061	rbm47	100	94.745	ENSSPAG00000001257	rbm47	100	95.630	Stegastes_partitus
ENSONIG00000009061	rbm47	94	85.196	ENSSSCG00000008796	RBM47	100	76.268	Sus_scrofa
ENSONIG00000009061	rbm47	100	76.797	ENSTGUG00000008705	RBM47	100	77.451	Taeniopygia_guttata
ENSONIG00000009061	rbm47	100	87.171	ENSTRUG00000014050	rbm47	100	87.171	Takifugu_rubripes
ENSONIG00000009061	rbm47	100	90.132	ENSTNIG00000006127	rbm47	100	89.967	Tetraodon_nigroviridis
ENSONIG00000009061	rbm47	72	83.333	ENSTBEG00000001607	RBM47	76	79.231	Tupaia_belangeri
ENSONIG00000009061	rbm47	94	78.646	ENSTTRG00000002839	RBM47	100	76.268	Tursiops_truncatus
ENSONIG00000009061	rbm47	94	77.163	ENSUAMG00000021346	RBM47	100	75.693	Ursus_americanus
ENSONIG00000009061	rbm47	52	84.127	ENSVPAG00000000641	-	56	75.000	Vicugna_pacos
ENSONIG00000009061	rbm47	94	77.312	ENSVVUG00000014774	RBM47	100	75.902	Vulpes_vulpes
ENSONIG00000009061	rbm47	100	75.693	ENSXETG00000012802	rbm47	100	76.020	Xenopus_tropicalis
ENSONIG00000009061	rbm47	88	88.918	ENSXCOG00000000780	rbm47	100	88.918	Xiphophorus_couchianus
ENSONIG00000009061	rbm47	100	89.655	ENSXMAG00000009874	rbm47	100	92.031	Xiphophorus_maculatus