EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000009145 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 1634 bases
Position: chrGL831205.1:628248-629881
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000011497	Las1	PF04031.13	1.8e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000011506	-	483	-	ENSONIP00000011497	161 (aa)	-	I3JRK3

Gene Model

Click here to download ENSONIG00000009145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000009145's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000009145	-	99	50.000	ENSONIG00000001662	-	86	50.000
ENSONIG00000009145	-	60	59.794	ENSONIG00000017910	-	60	59.794
ENSONIG00000009145	-	99	42.857	ENSONIG00000021108	-	80	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000009145	-	56	61.111	ENSACIG00000006110	-	78	61.111	Amphilophus_citrinellus
ENSONIG00000009145	-	50	60.000	ENSAOCG00000018705	-	56	60.000	Amphiprion_ocellaris
ENSONIG00000009145	-	50	60.000	ENSAPEG00000017704	-	56	60.000	Amphiprion_percula
ENSONIG00000009145	-	50	66.250	ENSACLG00000000371	-	74	66.250	Astatotilapia_calliptera
ENSONIG00000009145	-	52	55.422	ENSCVAG00000011585	-	77	55.422	Cyprinodon_variegatus
ENSONIG00000009145	-	94	47.020	ENSGMOG00000006077	las1l	73	43.931	Gadus_morhua
ENSONIG00000009145	-	50	58.750	ENSGAFG00000014822	-	75	58.750	Gambusia_affinis
ENSONIG00000009145	-	99	47.093	ENSGACG00000013130	-	68	47.093	Gasterosteus_aculeatus
ENSONIG00000009145	-	50	67.500	ENSHBUG00000002121	-	74	67.500	Haplochromis_burtoni
ENSONIG00000009145	-	50	56.250	ENSLBEG00000011597	-	63	56.250	Labrus_bergylta
ENSONIG00000009145	-	50	66.250	ENSMZEG00005026525	-	74	66.250	Maylandia_zebra
ENSONIG00000009145	-	50	66.250	ENSMZEG00005002235	-	72	66.250	Maylandia_zebra
ENSONIG00000009145	-	66	41.121	ENSMGAG00000000760	LAS1L	80	38.400	Meleagris_gallopavo
ENSONIG00000009145	-	50	58.025	ENSMMOG00000017364	-	57	58.025	Mola_mola
ENSONIG00000009145	-	53	54.118	ENSPMGG00000013885	-	76	56.250	Periophthalmus_magnuspinnatus
ENSONIG00000009145	-	52	60.241	ENSPMEG00000017983	-	80	60.241	Poecilia_mexicana
ENSONIG00000009145	-	50	61.250	ENSPREG00000005736	-	73	61.250	Poecilia_reticulata
ENSONIG00000009145	-	50	67.500	ENSPNYG00000024097	-	74	67.500	Pundamilia_nyererei
ENSONIG00000009145	-	50	60.000	ENSSMAG00000001529	-	86	47.414	Scophthalmus_maximus
ENSONIG00000009145	-	50	61.250	ENSSDUG00000013831	-	62	61.250	Seriola_dumerili
ENSONIG00000009145	-	50	60.000	ENSSLDG00000001558	-	62	60.000	Seriola_lalandi_dorsalis
ENSONIG00000009145	-	89	42.361	ENSTGUG00000002840	-	84	40.994	Taeniopygia_guttata
ENSONIG00000009145	-	50	61.250	ENSTRUG00000020641	-	59	61.250	Takifugu_rubripes
ENSONIG00000009145	-	93	48.000	ENSTNIG00000003282	-	81	46.875	Tetraodon_nigroviridis
ENSONIG00000009145	-	65	48.077	ENSXCOG00000000961	-	80	48.077	Xiphophorus_couchianus
ENSONIG00000009145	-	50	58.750	ENSXMAG00000023987	-	75	58.750	Xiphophorus_maculatus