EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000009211 (Gene tree)
Gene ID: 100709441
Gene Symbol: hdlbpb
Alias: -
Full Name: vigilin
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 20371 bases
Position: chrGL831208.1:25734-46104
Accession: 100709441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000011584	KH_1	PF00013.29	2.1e-186	1	14
ENSONIP00000011584	KH_1	PF00013.29	2.1e-186	2	14
ENSONIP00000011584	KH_1	PF00013.29	2.1e-186	3	14
ENSONIP00000011584	KH_1	PF00013.29	2.1e-186	4	14
ENSONIP00000011584	KH_1	PF00013.29	2.1e-186	5	14
ENSONIP00000011584	KH_1	PF00013.29	2.1e-186	6	14
ENSONIP00000011584	KH_1	PF00013.29	2.1e-186	7	14
ENSONIP00000011584	KH_1	PF00013.29	2.1e-186	8	14
ENSONIP00000011584	KH_1	PF00013.29	2.1e-186	9	14
ENSONIP00000011584	KH_1	PF00013.29	2.1e-186	10	14
ENSONIP00000011584	KH_1	PF00013.29	2.1e-186	11	14
ENSONIP00000011584	KH_1	PF00013.29	2.1e-186	12	14
ENSONIP00000011584	KH_1	PF00013.29	2.1e-186	13	14
ENSONIP00000011584	KH_1	PF00013.29	2.1e-186	14	14
ENSONIP00000011585	KH_1	PF00013.29	7e-186	1	14
ENSONIP00000011585	KH_1	PF00013.29	7e-186	2	14
ENSONIP00000011585	KH_1	PF00013.29	7e-186	3	14
ENSONIP00000011585	KH_1	PF00013.29	7e-186	4	14
ENSONIP00000011585	KH_1	PF00013.29	7e-186	5	14
ENSONIP00000011585	KH_1	PF00013.29	7e-186	6	14
ENSONIP00000011585	KH_1	PF00013.29	7e-186	7	14
ENSONIP00000011585	KH_1	PF00013.29	7e-186	8	14
ENSONIP00000011585	KH_1	PF00013.29	7e-186	9	14
ENSONIP00000011585	KH_1	PF00013.29	7e-186	10	14
ENSONIP00000011585	KH_1	PF00013.29	7e-186	11	14
ENSONIP00000011585	KH_1	PF00013.29	7e-186	12	14
ENSONIP00000011585	KH_1	PF00013.29	7e-186	13	14
ENSONIP00000011585	KH_1	PF00013.29	7e-186	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000011594	-	3810	-	ENSONIP00000011585	1270 (aa)	-	I3JRU0
ENSONIT00000011593	-	4068	-	ENSONIP00000011584	1268 (aa)	XP_003449379	I3JRT9

Gene Model

Click here to download ENSONIG00000009211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000009211's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000009211	hdlbpb	100	71.797	ENSONIG00000019272	hdlbpa	100	71.641

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000009211	hdlbpb	100	96.924	ENSAPOG00000006904	hdlbpb	100	96.924	Acanthochromis_polyacanthus
ENSONIG00000009211	hdlbpb	100	92.857	ENSACIG00000016154	hdlbpb	100	93.250	Amphilophus_citrinellus
ENSONIG00000009211	hdlbpb	100	97.634	ENSAOCG00000004083	hdlbpb	100	97.634	Amphiprion_ocellaris
ENSONIG00000009211	hdlbpb	100	97.555	ENSAPEG00000012270	hdlbpb	100	97.555	Amphiprion_percula
ENSONIG00000009211	hdlbpb	100	96.136	ENSATEG00000019877	hdlbpb	100	96.136	Anabas_testudineus
ENSONIG00000009211	hdlbpb	100	81.782	ENSACAG00000003606	-	100	81.782	Anolis_carolinensis
ENSONIG00000009211	hdlbpb	100	99.527	ENSACLG00000006618	hdlbpb	100	99.527	Astatotilapia_calliptera
ENSONIG00000009211	hdlbpb	100	78.206	ENSAMXG00000019946	hdlbpb	100	78.127	Astyanax_mexicanus
ENSONIG00000009211	hdlbpb	100	95.505	ENSCSEG00000000955	hdlbpb	100	95.584	Cynoglossus_semilaevis
ENSONIG00000009211	hdlbpb	100	95.347	ENSCVAG00000005345	hdlbpb	100	95.347	Cyprinodon_variegatus
ENSONIG00000009211	hdlbpb	100	85.118	ENSDARG00000061864	hdlbpb	99	85.320	Danio_rerio
ENSONIG00000009211	hdlbpb	93	69.924	ENSEBUG00000005304	hdlbpb	95	70.711	Eptatretus_burgeri
ENSONIG00000009211	hdlbpb	100	78.319	ENSELUG00000019925	hdlbpb	100	78.319	Esox_lucius
ENSONIG00000009211	hdlbpb	87	34.375	ENSFHEG00000001701	hdlbpb	100	90.221	Fundulus_heteroclitus
ENSONIG00000009211	hdlbpb	95	87.244	ENSGMOG00000004522	hdlbpb	78	87.244	Gadus_morhua
ENSONIG00000009211	hdlbpb	100	95.426	ENSGAFG00000005278	hdlbpb	100	95.426	Gambusia_affinis
ENSONIG00000009211	hdlbpb	100	91.654	ENSGACG00000019361	hdlbpb	100	91.871	Gasterosteus_aculeatus
ENSONIG00000009211	hdlbpb	100	99.369	ENSHBUG00000018434	hdlbpb	100	99.369	Haplochromis_burtoni
ENSONIG00000009211	hdlbpb	100	85.276	ENSIPUG00000003291	HDLBP	100	85.789	Ictalurus_punctatus
ENSONIG00000009211	hdlbpb	100	96.136	ENSKMAG00000016562	hdlbpb	100	96.136	Kryptolebias_marmoratus
ENSONIG00000009211	hdlbpb	100	96.215	ENSLBEG00000027855	hdlbpb	100	96.215	Labrus_bergylta
ENSONIG00000009211	hdlbpb	100	84.960	ENSLACG00000007661	hdlbpb	90	84.960	Latimeria_chalumnae
ENSONIG00000009211	hdlbpb	100	83.058	ENSLOCG00000013909	hdlbpb	100	83.058	Lepisosteus_oculatus
ENSONIG00000009211	hdlbpb	100	96.924	ENSMAMG00000003035	hdlbpb	100	96.924	Mastacembelus_armatus
ENSONIG00000009211	hdlbpb	100	99.527	ENSMZEG00005021465	hdlbpb	100	99.527	Maylandia_zebra
ENSONIG00000009211	hdlbpb	100	94.637	ENSMMOG00000012525	hdlbpb	100	94.637	Mola_mola
ENSONIG00000009211	hdlbpb	100	94.558	ENSMALG00000008938	hdlbpb	100	94.558	Monopterus_albus
ENSONIG00000009211	hdlbpb	100	99.527	ENSNBRG00000002236	hdlbpb	100	99.527	Neolamprologus_brichardi
ENSONIG00000009211	hdlbpb	100	95.189	ENSORLG00000006581	hdlbpb	100	95.032	Oryzias_latipes
ENSONIG00000009211	hdlbpb	100	95.032	ENSORLG00020010012	hdlbpb	100	94.874	Oryzias_latipes_hni
ENSONIG00000009211	hdlbpb	100	95.110	ENSORLG00015006863	hdlbpb	100	95.110	Oryzias_latipes_hsok
ENSONIG00000009211	hdlbpb	100	95.426	ENSOMEG00000011131	hdlbpb	100	95.268	Oryzias_melastigma
ENSONIG00000009211	hdlbpb	100	88.486	ENSPKIG00000005966	hdlbpb	100	88.486	Paramormyrops_kingsleyae
ENSONIG00000009211	hdlbpb	86	92.778	ENSPMGG00000019853	hdlbpb	99	92.778	Periophthalmus_magnuspinnatus
ENSONIG00000009211	hdlbpb	94	74.808	ENSPMAG00000002131	hdlbpb	100	74.808	Petromyzon_marinus
ENSONIG00000009211	hdlbpb	92	64.901	ENSPMAG00000000249	-	99	64.744	Petromyzon_marinus
ENSONIG00000009211	hdlbpb	100	94.848	ENSPFOG00000008755	hdlbpb	100	94.774	Poecilia_formosa
ENSONIG00000009211	hdlbpb	100	95.820	ENSPLAG00000007055	hdlbpb	100	95.820	Poecilia_latipinna
ENSONIG00000009211	hdlbpb	100	95.741	ENSPMEG00000001952	hdlbpb	100	95.741	Poecilia_mexicana
ENSONIG00000009211	hdlbpb	100	95.741	ENSPREG00000012848	hdlbpb	100	95.741	Poecilia_reticulata
ENSONIG00000009211	hdlbpb	100	99.211	ENSPNYG00000022467	hdlbpb	100	99.211	Pundamilia_nyererei
ENSONIG00000009211	hdlbpb	100	87.461	ENSPNAG00000011104	hdlbpb	100	87.382	Pygocentrus_nattereri
ENSONIG00000009211	hdlbpb	100	87.855	ENSSFOG00015023199	hdlbpb	100	87.855	Scleropages_formosus
ENSONIG00000009211	hdlbpb	100	96.609	ENSSMAG00000008790	hdlbpb	100	96.609	Scophthalmus_maximus
ENSONIG00000009211	hdlbpb	100	97.397	ENSSDUG00000020694	hdlbpb	100	97.397	Seriola_dumerili
ENSONIG00000009211	hdlbpb	100	96.924	ENSSLDG00000020807	hdlbpb	100	96.924	Seriola_lalandi_dorsalis
ENSONIG00000009211	hdlbpb	100	82.571	ENSSPUG00000018688	-	100	82.571	Sphenodon_punctatus
ENSONIG00000009211	hdlbpb	100	97.555	ENSSPAG00000016969	hdlbpb	100	97.555	Stegastes_partitus
ENSONIG00000009211	hdlbpb	98	92.716	ENSTRUG00000012888	hdlbpb	99	92.637	Takifugu_rubripes
ENSONIG00000009211	hdlbpb	100	93.735	ENSTNIG00000002555	hdlbpb	100	93.735	Tetraodon_nigroviridis
ENSONIG00000009211	hdlbpb	100	68.756	ENSXCOG00000001797	hdlbpb	100	83.871	Xiphophorus_couchianus
ENSONIG00000009211	hdlbpb	100	95.110	ENSXMAG00000015633	hdlbpb	100	95.110	Xiphophorus_maculatus