EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000009440 (Gene tree)
Gene ID: -
Gene Symbol: thoc1
Alias: -
Full Name: THO complex 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 11189 bases
Position: chrGL831134.1:2704318-2715506
Accession: ZDB-GENE-030826-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000011863	efThoc1	PF11957.8	3.9e-145	1	1
ENSONIP00000011864	efThoc1	PF11957.8	4.3e-145	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000011873	-	2458	-	ENSONIP00000011864	684 (aa)	-	I3JSL9
ENSONIT00000011872	-	1983	-	ENSONIP00000011863	661 (aa)	-	I3JSL8

Gene Model

Click here to download ENSONIG00000009440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000009440's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000009440	thoc1	99	72.231	ENSG00000079134	THOC1	99	77.941	Homo_sapiens
ENSONIG00000009440	thoc1	100	72.440	ENSAMEG00000006645	THOC1	100	72.440	Ailuropoda_melanoleuca
ENSONIG00000009440	thoc1	96	90.236	ENSACIG00000019392	thoc1	95	93.485	Amphilophus_citrinellus
ENSONIG00000009440	thoc1	98	89.555	ENSAOCG00000008391	thoc1	100	89.602	Amphiprion_ocellaris
ENSONIG00000009440	thoc1	98	95.392	ENSAPEG00000001093	thoc1	100	95.413	Amphiprion_percula
ENSONIG00000009440	thoc1	98	93.548	ENSATEG00000004783	thoc1	100	93.425	Anabas_testudineus
ENSONIG00000009440	thoc1	99	71.713	ENSAPLG00000016149	THOC1	98	71.756	Anas_platyrhynchos
ENSONIG00000009440	thoc1	99	72.590	ENSACAG00000008307	THOC1	98	71.988	Anolis_carolinensis
ENSONIG00000009440	thoc1	99	71.622	ENSANAG00000033200	THOC1	99	71.622	Aotus_nancymaae
ENSONIG00000009440	thoc1	98	99.386	ENSACLG00000016836	thoc1	100	99.388	Astatotilapia_calliptera
ENSONIG00000009440	thoc1	93	76.800	ENSAMXG00000014708	thoc1	98	76.236	Astyanax_mexicanus
ENSONIG00000009440	thoc1	99	72.534	ENSBTAG00000019215	THOC1	99	72.534	Bos_taurus
ENSONIG00000009440	thoc1	70	36.049	WBGene00020172	thoc-1	73	35.815	Caenorhabditis_elegans
ENSONIG00000009440	thoc1	99	72.382	ENSCJAG00000020450	THOC1	99	72.382	Callithrix_jacchus
ENSONIG00000009440	thoc1	99	72.382	ENSCAFG00000018324	THOC1	99	72.382	Canis_familiaris
ENSONIG00000009440	thoc1	99	72.382	ENSCAFG00020017894	THOC1	99	72.382	Canis_lupus_dingo
ENSONIG00000009440	thoc1	99	72.534	ENSCHIG00000015399	THOC1	99	73.561	Capra_hircus
ENSONIG00000009440	thoc1	100	72.139	ENSTSYG00000010585	THOC1	99	72.755	Carlito_syrichta
ENSONIG00000009440	thoc1	97	51.846	ENSCAPG00000016270	THOC1	98	51.846	Cavia_aperea
ENSONIG00000009440	thoc1	99	71.104	ENSCPOG00000000959	THOC1	99	71.713	Cavia_porcellus
ENSONIG00000009440	thoc1	99	72.382	ENSCCAG00000025766	THOC1	99	72.382	Cebus_capucinus
ENSONIG00000009440	thoc1	99	70.258	ENSCATG00000028180	THOC1	96	78.035	Cercocebus_atys
ENSONIG00000009440	thoc1	97	73.095	ENSCLAG00000009117	THOC1	99	73.742	Chinchilla_lanigera
ENSONIG00000009440	thoc1	99	72.382	ENSCSAG00000017631	THOC1	99	72.382	Chlorocebus_sabaeus
ENSONIG00000009440	thoc1	79	78.243	ENSCHOG00000010609	THOC1	78	78.243	Choloepus_hoffmanni
ENSONIG00000009440	thoc1	98	73.466	ENSCPBG00000027558	THOC1	99	73.466	Chrysemys_picta_bellii
ENSONIG00000009440	thoc1	73	47.475	ENSCING00000007663	-	99	46.869	Ciona_intestinalis
ENSONIG00000009440	thoc1	93	47.559	ENSCSAVG00000010649	-	100	47.310	Ciona_savignyi
ENSONIG00000009440	thoc1	99	72.231	ENSCANG00000034265	THOC1	96	78.426	Colobus_angolensis_palliatus
ENSONIG00000009440	thoc1	99	71.775	ENSCGRG00001016464	Thoc1	99	71.951	Cricetulus_griseus_chok1gshd
ENSONIG00000009440	thoc1	90	59.564	ENSCGRG00000003390	-	99	59.228	Cricetulus_griseus_crigri
ENSONIG00000009440	thoc1	99	71.975	ENSCGRG00000010269	-	99	73.270	Cricetulus_griseus_crigri
ENSONIG00000009440	thoc1	98	88.720	ENSCSEG00000012486	thoc1	99	89.068	Cynoglossus_semilaevis
ENSONIG00000009440	thoc1	99	90.214	ENSCVAG00000020600	thoc1	100	90.520	Cyprinodon_variegatus
ENSONIG00000009440	thoc1	99	83.742	ENSDARG00000088246	thoc1	99	83.896	Danio_rerio
ENSONIG00000009440	thoc1	99	72.036	ENSDNOG00000019217	THOC1	99	72.036	Dasypus_novemcinctus
ENSONIG00000009440	thoc1	96	69.606	ENSDORG00000008060	Thoc1	98	69.606	Dipodomys_ordii
ENSONIG00000009440	thoc1	98	36.805	FBgn0037382	Hpr1	74	42.000	Drosophila_melanogaster
ENSONIG00000009440	thoc1	89	55.612	ENSETEG00000004165	THOC1	98	55.612	Echinops_telfairi
ENSONIG00000009440	thoc1	91	64.167	ENSEBUG00000005998	thoc1	97	64.942	Eptatretus_burgeri
ENSONIG00000009440	thoc1	99	71.927	ENSEASG00005002549	THOC1	95	71.364	Equus_asinus_asinus
ENSONIG00000009440	thoc1	99	72.382	ENSECAG00000009267	THOC1	89	72.424	Equus_caballus
ENSONIG00000009440	thoc1	80	58.865	ENSEEUG00000012214	-	82	58.865	Erinaceus_europaeus
ENSONIG00000009440	thoc1	99	87.215	ENSELUG00000023277	thoc1	100	87.215	Esox_lucius
ENSONIG00000009440	thoc1	100	72.590	ENSFCAG00000022454	THOC1	87	72.590	Felis_catus
ENSONIG00000009440	thoc1	96	73.281	ENSFALG00000006205	THOC1	99	73.281	Ficedula_albicollis
ENSONIG00000009440	thoc1	97	73.406	ENSFDAG00000006842	THOC1	99	73.406	Fukomys_damarensis
ENSONIG00000009440	thoc1	98	91.551	ENSFHEG00000008841	thoc1	100	91.590	Fundulus_heteroclitus
ENSONIG00000009440	thoc1	99	88.754	ENSGMOG00000011486	thoc1	99	89.264	Gadus_morhua
ENSONIG00000009440	thoc1	99	72.282	ENSGALG00000014915	THOC1	99	71.515	Gallus_gallus
ENSONIG00000009440	thoc1	98	89.401	ENSGAFG00000021464	thoc1	100	89.450	Gambusia_affinis
ENSONIG00000009440	thoc1	99	91.806	ENSGACG00000017361	thoc1	100	91.806	Gasterosteus_aculeatus
ENSONIG00000009440	thoc1	99	73.700	ENSGAGG00000021230	-	97	73.700	Gopherus_agassizii
ENSONIG00000009440	thoc1	100	72.289	ENSGGOG00000003013	THOC1	99	72.907	Gorilla_gorilla
ENSONIG00000009440	thoc1	98	99.386	ENSHBUG00000009096	thoc1	100	99.388	Haplochromis_burtoni
ENSONIG00000009440	thoc1	79	58.163	ENSHGLG00000009264	-	98	63.415	Heterocephalus_glaber_female
ENSONIG00000009440	thoc1	99	72.163	ENSHGLG00000003712	-	99	72.783	Heterocephalus_glaber_female
ENSONIG00000009440	thoc1	77	57.143	ENSHGLG00100002225	-	97	60.000	Heterocephalus_glaber_male
ENSONIG00000009440	thoc1	99	72.163	ENSHGLG00100003570	THOC1	99	72.783	Heterocephalus_glaber_male
ENSONIG00000009440	thoc1	98	71.053	ENSIPUG00000005306	thoc1	100	70.279	Ictalurus_punctatus
ENSONIG00000009440	thoc1	99	72.079	ENSSTOG00000006484	THOC1	99	72.079	Ictidomys_tridecemlineatus
ENSONIG00000009440	thoc1	52	74.419	ENSJJAG00000014893	-	96	74.419	Jaculus_jaculus
ENSONIG00000009440	thoc1	99	91.437	ENSKMAG00000003904	thoc1	100	91.437	Kryptolebias_marmoratus
ENSONIG00000009440	thoc1	98	92.012	ENSLBEG00000020372	thoc1	99	91.128	Labrus_bergylta
ENSONIG00000009440	thoc1	98	73.466	ENSLACG00000014869	THOC1	99	73.160	Latimeria_chalumnae
ENSONIG00000009440	thoc1	99	83.005	ENSLOCG00000002097	thoc1	100	82.701	Lepisosteus_oculatus
ENSONIG00000009440	thoc1	99	72.382	ENSLAFG00000009585	THOC1	99	72.382	Loxodonta_africana
ENSONIG00000009440	thoc1	100	72.289	ENSMFAG00000041520	THOC1	99	72.907	Macaca_fascicularis
ENSONIG00000009440	thoc1	99	72.382	ENSMMUG00000004662	THOC1	99	72.382	Macaca_mulatta
ENSONIG00000009440	thoc1	100	72.289	ENSMNEG00000040177	THOC1	99	72.907	Macaca_nemestrina
ENSONIG00000009440	thoc1	100	72.289	ENSMLEG00000034201	THOC1	99	72.907	Mandrillus_leucophaeus
ENSONIG00000009440	thoc1	94	91.186	ENSMAMG00000016747	thoc1	100	91.069	Mastacembelus_armatus
ENSONIG00000009440	thoc1	98	99.386	ENSMZEG00005024609	thoc1	100	99.388	Maylandia_zebra
ENSONIG00000009440	thoc1	96	72.727	ENSMGAG00000009811	THOC1	99	72.727	Meleagris_gallopavo
ENSONIG00000009440	thoc1	99	71.168	ENSMAUG00000010272	Thoc1	99	71.494	Mesocricetus_auratus
ENSONIG00000009440	thoc1	99	72.534	ENSMICG00000027200	THOC1	99	72.534	Microcebus_murinus
ENSONIG00000009440	thoc1	99	62.519	ENSMOCG00000014924	-	96	61.912	Microtus_ochrogaster
ENSONIG00000009440	thoc1	99	70.517	ENSMOCG00000014536	-	86	70.517	Microtus_ochrogaster
ENSONIG00000009440	thoc1	92	92.962	ENSMMOG00000011772	thoc1	100	92.974	Mola_mola
ENSONIG00000009440	thoc1	98	72.298	ENSMODG00000021482	THOC1	98	72.298	Monodelphis_domestica
ENSONIG00000009440	thoc1	98	92.320	ENSMALG00000021872	thoc1	100	92.202	Monopterus_albus
ENSONIG00000009440	thoc1	99	71.017	MGP_CAROLIEiJ_G0021989	Thoc1	99	71.017	Mus_caroli
ENSONIG00000009440	thoc1	99	71.168	ENSMUSG00000024287	Thoc1	99	71.168	Mus_musculus
ENSONIG00000009440	thoc1	99	71.168	MGP_PahariEiJ_G0018726	Thoc1	99	71.168	Mus_pahari
ENSONIG00000009440	thoc1	99	71.168	MGP_SPRETEiJ_G0022905	Thoc1	99	71.168	Mus_spretus
ENSONIG00000009440	thoc1	99	72.534	ENSMPUG00000005448	THOC1	99	72.534	Mustela_putorius_furo
ENSONIG00000009440	thoc1	90	66.722	ENSMLUG00000027965	-	99	67.057	Myotis_lucifugus
ENSONIG00000009440	thoc1	60	66.416	ENSMLUG00000024912	-	100	66.416	Myotis_lucifugus
ENSONIG00000009440	thoc1	99	71.320	ENSMLUG00000004090	-	99	71.320	Myotis_lucifugus
ENSONIG00000009440	thoc1	99	71.927	ENSNGAG00000001401	-	99	71.927	Nannospalax_galili
ENSONIG00000009440	thoc1	96	58.110	ENSNGAG00000008061	-	97	58.110	Nannospalax_galili
ENSONIG00000009440	thoc1	96	96.063	ENSNBRG00000005991	thoc1	97	96.082	Neolamprologus_brichardi
ENSONIG00000009440	thoc1	99	72.382	ENSNLEG00000006835	THOC1	99	72.382	Nomascus_leucogenys
ENSONIG00000009440	thoc1	88	76.874	ENSMEUG00000009756	THOC1	82	76.874	Notamacropus_eugenii
ENSONIG00000009440	thoc1	99	58.574	ENSOPRG00000001108	THOC1	99	58.574	Ochotona_princeps
ENSONIG00000009440	thoc1	99	66.717	ENSODEG00000006623	THOC1	99	67.278	Octodon_degus
ENSONIG00000009440	thoc1	99	72.534	ENSOCUG00000011601	THOC1	99	72.534	Oryctolagus_cuniculus
ENSONIG00000009440	thoc1	98	92.012	ENSORLG00000017629	thoc1	100	92.049	Oryzias_latipes
ENSONIG00000009440	thoc1	98	92.166	ENSORLG00020007567	thoc1	100	92.202	Oryzias_latipes_hni
ENSONIG00000009440	thoc1	98	92.012	ENSORLG00015007356	thoc1	100	92.049	Oryzias_latipes_hsok
ENSONIG00000009440	thoc1	98	90.937	ENSOMEG00000008200	thoc1	100	90.826	Oryzias_melastigma
ENSONIG00000009440	thoc1	100	69.277	ENSOGAG00000000470	THOC1	100	69.277	Otolemur_garnettii
ENSONIG00000009440	thoc1	98	73.077	ENSOARG00000009238	THOC1	98	73.077	Ovis_aries
ENSONIG00000009440	thoc1	100	72.289	ENSPPAG00000031812	THOC1	99	72.907	Pan_paniscus
ENSONIG00000009440	thoc1	99	72.079	ENSPPRG00000023794	THOC1	96	78.324	Panthera_pardus
ENSONIG00000009440	thoc1	99	72.079	ENSPTIG00000007469	THOC1	96	78.324	Panthera_tigris_altaica
ENSONIG00000009440	thoc1	99	71.471	ENSPTRG00000009816	THOC1	99	71.471	Pan_troglodytes
ENSONIG00000009440	thoc1	99	71.493	ENSPANG00000008665	THOC1	99	71.493	Papio_anubis
ENSONIG00000009440	thoc1	99	83.817	ENSPKIG00000005906	thoc1	100	85.802	Paramormyrops_kingsleyae
ENSONIG00000009440	thoc1	80	76.136	ENSPSIG00000007691	THOC1	97	76.136	Pelodiscus_sinensis
ENSONIG00000009440	thoc1	94	85.417	ENSPMGG00000008279	thoc1	96	85.417	Periophthalmus_magnuspinnatus
ENSONIG00000009440	thoc1	99	71.168	ENSPEMG00000021789	Thoc1	99	71.168	Peromyscus_maniculatus_bairdii
ENSONIG00000009440	thoc1	73	72.802	ENSPCIG00000026942	THOC1	97	72.802	Phascolarctos_cinereus
ENSONIG00000009440	thoc1	98	89.708	ENSPFOG00000011673	thoc1	100	89.602	Poecilia_formosa
ENSONIG00000009440	thoc1	98	89.862	ENSPLAG00000019648	thoc1	100	89.908	Poecilia_latipinna
ENSONIG00000009440	thoc1	98	89.862	ENSPMEG00000007083	thoc1	100	89.755	Poecilia_mexicana
ENSONIG00000009440	thoc1	98	89.862	ENSPREG00000006719	thoc1	100	89.908	Poecilia_reticulata
ENSONIG00000009440	thoc1	74	76.543	ENSPPYG00000009049	-	98	76.543	Pongo_abelii
ENSONIG00000009440	thoc1	99	64.036	ENSPCAG00000005320	THOC1	99	64.492	Procavia_capensis
ENSONIG00000009440	thoc1	99	71.775	ENSPCOG00000009234	THOC1	99	71.775	Propithecus_coquereli
ENSONIG00000009440	thoc1	99	70.713	ENSPVAG00000004007	THOC1	99	70.713	Pteropus_vampyrus
ENSONIG00000009440	thoc1	98	99.386	ENSPNYG00000019152	thoc1	100	99.388	Pundamilia_nyererei
ENSONIG00000009440	thoc1	99	83.792	ENSPNAG00000023390	thoc1	100	83.639	Pygocentrus_nattereri
ENSONIG00000009440	thoc1	81	61.011	ENSRNOG00000015332	Thoc1	95	61.011	Rattus_norvegicus
ENSONIG00000009440	thoc1	99	71.622	ENSRBIG00000033738	THOC1	99	74.697	Rhinopithecus_bieti
ENSONIG00000009440	thoc1	99	72.382	ENSRROG00000044988	THOC1	96	78.426	Rhinopithecus_roxellana
ENSONIG00000009440	thoc1	100	71.988	ENSSBOG00000016556	THOC1	99	72.603	Saimiri_boliviensis_boliviensis
ENSONIG00000009440	thoc1	98	73.118	ENSSHAG00000014829	THOC1	98	73.118	Sarcophilus_harrisii
ENSONIG00000009440	thoc1	99	87.156	ENSSFOG00015021527	thoc1	100	87.156	Scleropages_formosus
ENSONIG00000009440	thoc1	98	89.094	ENSSMAG00000018465	thoc1	99	89.094	Scophthalmus_maximus
ENSONIG00000009440	thoc1	98	94.470	ENSSDUG00000016810	thoc1	100	94.343	Seriola_dumerili
ENSONIG00000009440	thoc1	98	94.163	ENSSLDG00000015555	thoc1	100	94.037	Seriola_lalandi_dorsalis
ENSONIG00000009440	thoc1	87	73.359	ENSSARG00000006910	THOC1	87	73.359	Sorex_araneus
ENSONIG00000009440	thoc1	97	72.317	ENSSPUG00000007238	THOC1	98	71.846	Sphenodon_punctatus
ENSONIG00000009440	thoc1	98	89.433	ENSSPAG00000018847	thoc1	99	89.482	Stegastes_partitus
ENSONIG00000009440	thoc1	100	72.289	ENSSSCG00000025653	THOC1	94	72.289	Sus_scrofa
ENSONIG00000009440	thoc1	98	73.160	ENSTGUG00000010204	THOC1	99	73.160	Taeniopygia_guttata
ENSONIG00000009440	thoc1	98	91.244	ENSTRUG00000013518	thoc1	100	91.131	Takifugu_rubripes
ENSONIG00000009440	thoc1	98	90.169	ENSTNIG00000008473	thoc1	99	90.169	Tetraodon_nigroviridis
ENSONIG00000009440	thoc1	98	65.745	ENSTBEG00000016920	THOC1	98	65.745	Tupaia_belangeri
ENSONIG00000009440	thoc1	99	66.313	ENSTTRG00000016664	THOC1	99	66.313	Tursiops_truncatus
ENSONIG00000009440	thoc1	99	72.686	ENSUAMG00000002527	THOC1	99	72.686	Ursus_americanus
ENSONIG00000009440	thoc1	99	72.686	ENSUMAG00000019693	THOC1	99	72.686	Ursus_maritimus
ENSONIG00000009440	thoc1	67	68.201	ENSVPAG00000003726	-	67	68.201	Vicugna_pacos
ENSONIG00000009440	thoc1	99	72.382	ENSVVUG00000004384	THOC1	99	72.382	Vulpes_vulpes
ENSONIG00000009440	thoc1	99	70.953	ENSXETG00000003155	thoc1	97	71.125	Xenopus_tropicalis
ENSONIG00000009440	thoc1	92	85.434	ENSXCOG00000016085	thoc1	89	85.505	Xiphophorus_couchianus
ENSONIG00000009440	thoc1	98	90.169	ENSXMAG00000002353	thoc1	100	90.214	Xiphophorus_maculatus