EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000009549 (Gene tree)
Gene ID: -
Gene Symbol: rbfox3b
Alias: -
Full Name: RNA binding fox-1 homolog 3b
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 198961 bases
Position: chrGL831151.1:3466867-3665827
Accession: ZDB-GENE-091204-46
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000011996	Fox-1_C	PF12414.8	4e-43	1	1
ENSONIP00000011997	Fox-1_C	PF12414.8	2.7e-42	1	1
ENSONIP00000011996	RRM_1	PF00076.22	1.2e-18	1	1
ENSONIP00000011997	RRM_1	PF00076.22	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000012005	-	1104	-	ENSONIP00000011996	367 (aa)	-	I3JT01
ENSONIT00000012006	-	1101	-	ENSONIP00000011997	366 (aa)	-	I3JT02

Gene Model

Click here to download ENSONIG00000009549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000009549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000009549	rbfox3b	80	50.284	ENSONIG00000008341	-	95	51.145
ENSONIG00000009549	rbfox3b	74	53.727	ENSONIG00000017998	rbfox2	90	50.765
ENSONIG00000009549	rbfox3b	93	54.802	ENSONIG00000012754	rbfox1l	85	58.055
ENSONIG00000009549	rbfox3b	92	79.941	ENSONIG00000007282	-	99	80.826

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000009549	rbfox3b	92	74.212	ENSG00000167281	RBFOX3	99	89.189	Homo_sapiens
ENSONIG00000009549	rbfox3b	100	99.728	ENSAPOG00000021630	rbfox3b	96	99.728	Acanthochromis_polyacanthus
ENSONIG00000009549	rbfox3b	88	69.231	ENSAPOG00000015658	-	84	70.154	Acanthochromis_polyacanthus
ENSONIG00000009549	rbfox3b	89	75.862	ENSAMEG00000014170	RBFOX3	88	77.810	Ailuropoda_melanoleuca
ENSONIG00000009549	rbfox3b	97	84.507	ENSACIG00000010817	rbfox3b	99	95.513	Amphilophus_citrinellus
ENSONIG00000009549	rbfox3b	84	70.552	ENSACIG00000003768	-	90	70.859	Amphilophus_citrinellus
ENSONIG00000009549	rbfox3b	98	74.444	ENSAOCG00000010786	-	94	75.278	Amphiprion_ocellaris
ENSONIG00000009549	rbfox3b	100	99.728	ENSAOCG00000012358	rbfox3b	100	99.728	Amphiprion_ocellaris
ENSONIG00000009549	rbfox3b	98	82.730	ENSAPEG00000019081	rbfox3b	82	99.167	Amphiprion_percula
ENSONIG00000009549	rbfox3b	88	75.216	ENSAPEG00000015891	-	87	75.000	Amphiprion_percula
ENSONIG00000009549	rbfox3b	97	88.451	ENSATEG00000019945	rbfox3b	99	89.766	Anabas_testudineus
ENSONIG00000009549	rbfox3b	93	69.971	ENSATEG00000023101	-	96	79.683	Anabas_testudineus
ENSONIG00000009549	rbfox3b	89	80.363	ENSACAG00000016093	RBFOX3	99	77.008	Anolis_carolinensis
ENSONIG00000009549	rbfox3b	92	70.796	ENSANAG00000023457	RBFOX3	100	82.484	Aotus_nancymaae
ENSONIG00000009549	rbfox3b	98	76.667	ENSACLG00000025552	-	97	77.500	Astatotilapia_calliptera
ENSONIG00000009549	rbfox3b	100	98.913	ENSACLG00000020011	rbfox3b	100	98.722	Astatotilapia_calliptera
ENSONIG00000009549	rbfox3b	99	81.843	ENSAMXG00000042841	rbfox3b	94	86.018	Astyanax_mexicanus
ENSONIG00000009549	rbfox3b	100	83.554	ENSAMXG00000037246	rbfox3a	98	85.714	Astyanax_mexicanus
ENSONIG00000009549	rbfox3b	92	65.903	ENSBTAG00000006280	RBFOX3	100	68.956	Bos_taurus
ENSONIG00000009549	rbfox3b	92	73.926	ENSCJAG00000009563	RBFOX3	100	76.374	Callithrix_jacchus
ENSONIG00000009549	rbfox3b	65	84.583	ENSCAFG00000005547	RBFOX3	85	87.448	Canis_familiaris
ENSONIG00000009549	rbfox3b	96	74.931	ENSCAFG00020008126	RBFOX3	100	77.513	Canis_lupus_dingo
ENSONIG00000009549	rbfox3b	96	74.931	ENSCHIG00000009124	RBFOX3	100	77.513	Capra_hircus
ENSONIG00000009549	rbfox3b	92	74.286	ENSTSYG00000029617	RBFOX3	100	76.712	Carlito_syrichta
ENSONIG00000009549	rbfox3b	96	76.230	ENSCPOG00000021703	RBFOX3	100	76.903	Cavia_porcellus
ENSONIG00000009549	rbfox3b	70	93.103	ENSCCAG00000028450	RBFOX3	100	82.484	Cebus_capucinus
ENSONIG00000009549	rbfox3b	92	72.414	ENSCATG00000018349	RBFOX3	100	82.803	Cercocebus_atys
ENSONIG00000009549	rbfox3b	96	76.648	ENSCLAG00000006449	RBFOX3	100	77.309	Chinchilla_lanigera
ENSONIG00000009549	rbfox3b	92	71.091	ENSCSAG00000002355	RBFOX3	100	82.803	Chlorocebus_sabaeus
ENSONIG00000009549	rbfox3b	88	83.951	ENSCPBG00000010904	RBFOX3	100	83.706	Chrysemys_picta_bellii
ENSONIG00000009549	rbfox3b	96	75.207	ENSCANG00000043120	RBFOX3	100	82.803	Colobus_angolensis_palliatus
ENSONIG00000009549	rbfox3b	96	74.795	ENSCGRG00001019476	Rbfox3	100	77.105	Cricetulus_griseus_chok1gshd
ENSONIG00000009549	rbfox3b	96	74.795	ENSCGRG00000003268	Rbfox3	100	77.105	Cricetulus_griseus_crigri
ENSONIG00000009549	rbfox3b	99	79.891	ENSCSEG00000015567	RBFOX3	97	80.707	Cynoglossus_semilaevis
ENSONIG00000009549	rbfox3b	96	71.588	ENSCSEG00000020606	RBFOX3	97	70.474	Cynoglossus_semilaevis
ENSONIG00000009549	rbfox3b	100	99.728	ENSCVAG00000006882	rbfox3b	100	99.728	Cyprinodon_variegatus
ENSONIG00000009549	rbfox3b	100	66.485	ENSDARG00000074310	rbfox3b	96	79.730	Danio_rerio
ENSONIG00000009549	rbfox3b	100	83.554	ENSDARG00000010083	rbfox3a	99	86.322	Danio_rerio
ENSONIG00000009549	rbfox3b	76	72.222	ENSDNOG00000039391	RBFOX3	96	65.229	Dasypus_novemcinctus
ENSONIG00000009549	rbfox3b	96	69.359	ENSDORG00000005352	Rbfox3	100	70.667	Dipodomys_ordii
ENSONIG00000009549	rbfox3b	100	62.827	ENSEBUG00000002129	RBFOX3	95	69.027	Eptatretus_burgeri
ENSONIG00000009549	rbfox3b	84	51.111	ENSEBUG00000013559	RBFOX3	88	53.968	Eptatretus_burgeri
ENSONIG00000009549	rbfox3b	92	71.261	ENSEASG00005005059	RBFOX3	100	82.278	Equus_asinus_asinus
ENSONIG00000009549	rbfox3b	92	70.968	ENSECAG00000023811	RBFOX3	100	81.962	Equus_caballus
ENSONIG00000009549	rbfox3b	96	63.812	ENSEEUG00000013974	RBFOX3	100	65.782	Erinaceus_europaeus
ENSONIG00000009549	rbfox3b	100	95.095	ENSELUG00000017963	rbfox3b	100	95.095	Esox_lucius
ENSONIG00000009549	rbfox3b	52	63.776	ENSELUG00000009807	-	64	55.357	Esox_lucius
ENSONIG00000009549	rbfox3b	89	78.852	ENSFCAG00000002555	RBFOX3	100	81.847	Felis_catus
ENSONIG00000009549	rbfox3b	90	68.132	ENSFALG00000012288	RBFOX3	95	63.342	Ficedula_albicollis
ENSONIG00000009549	rbfox3b	96	71.038	ENSFDAG00000007489	RBFOX3	100	71.916	Fukomys_damarensis
ENSONIG00000009549	rbfox3b	96	79.830	ENSFHEG00000008550	rbfox3b	100	90.064	Fundulus_heteroclitus
ENSONIG00000009549	rbfox3b	100	68.533	ENSGMOG00000019304	-	100	69.333	Gadus_morhua
ENSONIG00000009549	rbfox3b	98	76.667	ENSGALG00000032889	RBFOX3	99	78.552	Gallus_gallus
ENSONIG00000009549	rbfox3b	100	92.916	ENSGAFG00000005025	rbfox3b	100	92.916	Gambusia_affinis
ENSONIG00000009549	rbfox3b	96	73.554	ENSGACG00000002138	-	100	74.074	Gasterosteus_aculeatus
ENSONIG00000009549	rbfox3b	98	77.716	ENSGAGG00000020025	RBFOX3	100	83.706	Gopherus_agassizii
ENSONIG00000009549	rbfox3b	96	75.207	ENSGGOG00000012546	RBFOX3	100	82.803	Gorilla_gorilla
ENSONIG00000009549	rbfox3b	100	73.913	ENSHBUG00000023098	-	95	82.229	Haplochromis_burtoni
ENSONIG00000009549	rbfox3b	100	99.183	ENSHBUG00000018099	rbfox3b	100	99.183	Haplochromis_burtoni
ENSONIG00000009549	rbfox3b	96	75.000	ENSHGLG00000008679	RBFOX3	100	75.718	Heterocephalus_glaber_female
ENSONIG00000009549	rbfox3b	96	72.011	ENSHGLG00100014739	RBFOX3	100	72.846	Heterocephalus_glaber_male
ENSONIG00000009549	rbfox3b	75	90.909	ENSHCOG00000001863	RBFOX3	92	75.159	Hippocampus_comes
ENSONIG00000009549	rbfox3b	98	80.055	ENSHCOG00000007444	RBFOX3	93	81.644	Hippocampus_comes
ENSONIG00000009549	rbfox3b	97	72.599	ENSIPUG00000021966	rbfox3b	98	85.606	Ictalurus_punctatus
ENSONIG00000009549	rbfox3b	100	81.963	ENSIPUG00000012010	rbfox3a	100	83.820	Ictalurus_punctatus
ENSONIG00000009549	rbfox3b	96	60.894	ENSSTOG00000026817	RBFOX3	100	77.949	Ictidomys_tridecemlineatus
ENSONIG00000009549	rbfox3b	96	74.931	ENSJJAG00000014167	Rbfox3	100	77.513	Jaculus_jaculus
ENSONIG00000009549	rbfox3b	100	99.728	ENSKMAG00000006726	rbfox3b	100	99.728	Kryptolebias_marmoratus
ENSONIG00000009549	rbfox3b	100	84.718	ENSLBEG00000022508	-	97	80.556	Labrus_bergylta
ENSONIG00000009549	rbfox3b	98	91.922	ENSLBEG00000004030	rbfox3b	99	95.192	Labrus_bergylta
ENSONIG00000009549	rbfox3b	88	71.549	ENSLACG00000018409	-	90	72.958	Latimeria_chalumnae
ENSONIG00000009549	rbfox3b	88	88.650	ENSLOCG00000012267	rbfox3a	98	90.184	Lepisosteus_oculatus
ENSONIG00000009549	rbfox3b	96	75.482	ENSLAFG00000016623	RBFOX3	100	77.513	Loxodonta_africana
ENSONIG00000009549	rbfox3b	96	73.204	ENSMFAG00000002247	RBFOX3	100	76.648	Macaca_fascicularis
ENSONIG00000009549	rbfox3b	92	71.091	ENSMMUG00000023028	RBFOX3	100	82.803	Macaca_mulatta
ENSONIG00000009549	rbfox3b	96	72.928	ENSMNEG00000041147	RBFOX3	100	82.484	Macaca_nemestrina
ENSONIG00000009549	rbfox3b	92	72.414	ENSMLEG00000025686	RBFOX3	100	82.803	Mandrillus_leucophaeus
ENSONIG00000009549	rbfox3b	97	78.028	ENSMAMG00000019810	rbfox3b	99	87.821	Mastacembelus_armatus
ENSONIG00000009549	rbfox3b	88	80.308	ENSMAMG00000020600	-	93	80.000	Mastacembelus_armatus
ENSONIG00000009549	rbfox3b	83	62.798	ENSMZEG00005003055	-	80	63.095	Maylandia_zebra
ENSONIG00000009549	rbfox3b	100	99.183	ENSMZEG00005000781	rbfox3b	96	99.183	Maylandia_zebra
ENSONIG00000009549	rbfox3b	60	80.909	ENSMGAG00000005600	RBFOX3	83	81.279	Meleagris_gallopavo
ENSONIG00000009549	rbfox3b	96	76.099	ENSMAUG00000013543	Rbfox3	100	76.781	Mesocricetus_auratus
ENSONIG00000009549	rbfox3b	100	76.923	ENSMICG00000014898	RBFOX3	100	81.789	Microcebus_murinus
ENSONIG00000009549	rbfox3b	96	73.352	ENSMOCG00000015373	Rbfox3	100	75.989	Microtus_ochrogaster
ENSONIG00000009549	rbfox3b	100	97.561	ENSMMOG00000020193	rbfox3b	100	97.561	Mola_mola
ENSONIG00000009549	rbfox3b	89	79.697	ENSMODG00000002089	RBFOX3	92	81.763	Monodelphis_domestica
ENSONIG00000009549	rbfox3b	100	98.093	ENSMALG00000020407	rbfox3b	100	98.093	Monopterus_albus
ENSONIG00000009549	rbfox3b	100	82.258	ENSMALG00000018270	-	96	83.065	Monopterus_albus
ENSONIG00000009549	rbfox3b	96	73.901	MGP_CAROLIEiJ_G0017487	Rbfox3	99	88.194	Mus_caroli
ENSONIG00000009549	rbfox3b	96	75.549	ENSMUSG00000025576	Rbfox3	99	88.194	Mus_musculus
ENSONIG00000009549	rbfox3b	96	74.521	MGP_PahariEiJ_G0018614	Rbfox3	99	88.889	Mus_pahari
ENSONIG00000009549	rbfox3b	96	74.176	MGP_SPRETEiJ_G0018331	Rbfox3	99	88.194	Mus_spretus
ENSONIG00000009549	rbfox3b	96	64.872	ENSMPUG00000012319	RBFOX3	95	73.497	Mustela_putorius_furo
ENSONIG00000009549	rbfox3b	96	75.000	ENSNGAG00000018006	Rbfox3	100	77.573	Nannospalax_galili
ENSONIG00000009549	rbfox3b	100	98.093	ENSNBRG00000010102	rbfox3b	100	98.093	Neolamprologus_brichardi
ENSONIG00000009549	rbfox3b	90	75.758	ENSNBRG00000022885	-	91	75.602	Neolamprologus_brichardi
ENSONIG00000009549	rbfox3b	61	89.286	ENSNLEG00000000153	-	82	92.593	Nomascus_leucogenys
ENSONIG00000009549	rbfox3b	78	85.106	ENSMEUG00000004218	-	100	55.858	Notamacropus_eugenii
ENSONIG00000009549	rbfox3b	68	76.963	ENSOPRG00000016279	-	71	81.667	Ochotona_princeps
ENSONIG00000009549	rbfox3b	96	76.648	ENSODEG00000009433	RBFOX3	100	82.222	Octodon_degus
ENSONIG00000009549	rbfox3b	76	65.398	ENSOCUG00000014217	RBFOX3	74	68.266	Oryctolagus_cuniculus
ENSONIG00000009549	rbfox3b	100	98.910	ENSORLG00000000905	rbfox3b	69	98.889	Oryzias_latipes
ENSONIG00000009549	rbfox3b	100	98.910	ENSORLG00020018030	rbfox3b	100	94.531	Oryzias_latipes_hni
ENSONIG00000009549	rbfox3b	100	99.183	ENSORLG00015009200	rbfox3b	100	99.183	Oryzias_latipes_hsok
ENSONIG00000009549	rbfox3b	85	93.009	ENSOMEG00000014677	rbfox3b	86	93.009	Oryzias_melastigma
ENSONIG00000009549	rbfox3b	88	79.938	ENSOGAG00000029595	RBFOX3	86	82.099	Otolemur_garnettii
ENSONIG00000009549	rbfox3b	87	59.195	ENSOARG00000002908	RBFOX3	97	52.683	Ovis_aries
ENSONIG00000009549	rbfox3b	80	75.000	ENSPPAG00000025383	RBFOX3	99	81.882	Pan_paniscus
ENSONIG00000009549	rbfox3b	92	72.754	ENSPPRG00000007819	RBFOX3	100	75.278	Panthera_pardus
ENSONIG00000009549	rbfox3b	96	75.207	ENSPTRG00000009727	RBFOX3	100	82.803	Pan_troglodytes
ENSONIG00000009549	rbfox3b	92	72.414	ENSPANG00000019837	RBFOX3	100	82.803	Papio_anubis
ENSONIG00000009549	rbfox3b	100	64.033	ENSPKIG00000022633	-	90	69.369	Paramormyrops_kingsleyae
ENSONIG00000009549	rbfox3b	100	88.235	ENSPKIG00000010299	rbfox3a	99	88.439	Paramormyrops_kingsleyae
ENSONIG00000009549	rbfox3b	85	85.350	ENSPMGG00000008000	rbfox3b	97	85.350	Periophthalmus_magnuspinnatus
ENSONIG00000009549	rbfox3b	96	73.901	ENSPEMG00000010500	Rbfox3	100	76.517	Peromyscus_maniculatus_bairdii
ENSONIG00000009549	rbfox3b	62	63.786	ENSPMAG00000008689	rbfox3b	93	76.842	Petromyzon_marinus
ENSONIG00000009549	rbfox3b	93	75.568	ENSPCIG00000005766	RBFOX3	100	77.686	Phascolarctos_cinereus
ENSONIG00000009549	rbfox3b	100	99.728	ENSPFOG00000018294	rbfox3b	96	99.728	Poecilia_formosa
ENSONIG00000009549	rbfox3b	80	81.911	ENSPLAG00000000481	rbfox3b	73	94.118	Poecilia_latipinna
ENSONIG00000009549	rbfox3b	96	79.545	ENSPMEG00000022997	rbfox3b	100	89.744	Poecilia_mexicana
ENSONIG00000009549	rbfox3b	100	99.728	ENSPREG00000012886	rbfox3b	99	99.728	Poecilia_reticulata
ENSONIG00000009549	rbfox3b	96	61.932	ENSPPYG00000008704	RBFOX3	87	75.758	Pongo_abelii
ENSONIG00000009549	rbfox3b	92	71.920	ENSPCAG00000001401	RBFOX3	100	74.451	Procavia_capensis
ENSONIG00000009549	rbfox3b	99	72.654	ENSPCOG00000012689	RBFOX3	100	75.824	Propithecus_coquereli
ENSONIG00000009549	rbfox3b	92	66.286	ENSPVAG00000015243	RBFOX3	100	68.493	Pteropus_vampyrus
ENSONIG00000009549	rbfox3b	98	78.947	ENSPNYG00000010414	rbfox3b	79	97.925	Pundamilia_nyererei
ENSONIG00000009549	rbfox3b	98	76.667	ENSPNYG00000009079	-	93	76.519	Pundamilia_nyererei
ENSONIG00000009549	rbfox3b	100	83.820	ENSPNAG00000002889	rbfox3a	100	85.411	Pygocentrus_nattereri
ENSONIG00000009549	rbfox3b	97	62.147	ENSPNAG00000018173	rbfox3b	90	70.833	Pygocentrus_nattereri
ENSONIG00000009549	rbfox3b	96	74.521	ENSRNOG00000003386	Rbfox3	100	81.962	Rattus_norvegicus
ENSONIG00000009549	rbfox3b	89	79.154	ENSRBIG00000040449	RBFOX3	92	81.212	Rhinopithecus_bieti
ENSONIG00000009549	rbfox3b	92	72.414	ENSRROG00000000766	RBFOX3	100	82.803	Rhinopithecus_roxellana
ENSONIG00000009549	rbfox3b	96	74.931	ENSSBOG00000031591	RBFOX3	100	82.484	Saimiri_boliviensis_boliviensis
ENSONIG00000009549	rbfox3b	88	74.790	ENSSHAG00000016076	RBFOX3	100	73.482	Sarcophilus_harrisii
ENSONIG00000009549	rbfox3b	100	86.631	ENSSFOG00015023260	rbfox3a	100	87.968	Scleropages_formosus
ENSONIG00000009549	rbfox3b	97	70.556	ENSSFOG00015004716	RBFOX3	99	69.780	Scleropages_formosus
ENSONIG00000009549	rbfox3b	100	95.312	ENSSMAG00000012618	rbfox3b	87	95.312	Scophthalmus_maximus
ENSONIG00000009549	rbfox3b	98	77.222	ENSSMAG00000019052	-	100	82.803	Scophthalmus_maximus
ENSONIG00000009549	rbfox3b	96	79.830	ENSSDUG00000023183	rbfox3b	100	90.064	Seriola_dumerili
ENSONIG00000009549	rbfox3b	97	77.437	ENSSDUG00000015801	-	96	78.273	Seriola_dumerili
ENSONIG00000009549	rbfox3b	100	100.000	ENSSLDG00000000149	rbfox3b	100	100.000	Seriola_lalandi_dorsalis
ENSONIG00000009549	rbfox3b	97	80.780	ENSSLDG00000016098	-	96	81.616	Seriola_lalandi_dorsalis
ENSONIG00000009549	rbfox3b	92	74.118	ENSSPUG00000011733	RBFOX3	99	83.706	Sphenodon_punctatus
ENSONIG00000009549	rbfox3b	85	67.628	ENSSPAG00000004898	-	85	78.049	Stegastes_partitus
ENSONIG00000009549	rbfox3b	98	83.287	ENSSPAG00000017571	rbfox3b	96	83.287	Stegastes_partitus
ENSONIG00000009549	rbfox3b	88	75.224	ENSSSCG00000039498	RBFOX3	100	77.313	Sus_scrofa
ENSONIG00000009549	rbfox3b	100	80.800	ENSTRUG00000004894	rbfox3b	93	89.790	Takifugu_rubripes
ENSONIG00000009549	rbfox3b	88	89.014	ENSTNIG00000011278	rbfox3b	89	89.014	Tetraodon_nigroviridis
ENSONIG00000009549	rbfox3b	73	61.818	ENSTBEG00000004296	-	100	53.083	Tupaia_belangeri
ENSONIG00000009549	rbfox3b	92	68.481	ENSTTRG00000003676	RBFOX3	100	71.154	Tursiops_truncatus
ENSONIG00000009549	rbfox3b	92	71.091	ENSUAMG00000004668	RBFOX3	100	82.803	Ursus_americanus
ENSONIG00000009549	rbfox3b	89	79.878	ENSVVUG00000017864	RBFOX3	100	82.484	Vulpes_vulpes
ENSONIG00000009549	rbfox3b	100	60.859	ENSXETG00000020236	rbfox3	95	60.759	Xenopus_tropicalis
ENSONIG00000009549	rbfox3b	98	98.338	ENSXCOG00000018262	rbfox3b	100	98.338	Xiphophorus_couchianus
ENSONIG00000009549	rbfox3b	100	100.000	ENSXMAG00000012939	rbfox3b	100	100.000	Xiphophorus_maculatus