EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000009626 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 9019 bases
Position: chrGL831134.1:4265262-4274280
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000012092	zf-RanBP	PF00641.18	1.2e-06	1	1
ENSONIP00000012093	zf-RanBP	PF00641.18	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000012101	-	1110	-	ENSONIP00000012092	370 (aa)	-	I3JT97
ENSONIT00000012102	-	654	-	ENSONIP00000012093	218 (aa)	-	I3JT98
ENSONIT00000012103	-	444	-	ENSONIP00000012094	148 (aa)	-	I3JT99

Gene Model

Click here to download ENSONIG00000009626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000009626's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000009626	-	97	55.528	ENSONIG00000014401	shrprbck1r	55	56.020
ENSONIG00000009626	-	97	34.667	ENSONIG00000006803	rbck1	53	33.937

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000009626	-	100	77.372	ENSAPOG00000023352	sharpin	91	77.372	Acanthochromis_polyacanthus
ENSONIG00000009626	-	97	57.039	ENSAPOG00000022737	shrprbck1r	55	57.039	Acanthochromis_polyacanthus
ENSONIG00000009626	-	97	55.283	ENSACIG00000002184	shrprbck1r	80	54.342	Amphilophus_citrinellus
ENSONIG00000009626	-	97	56.479	ENSAOCG00000002890	shrprbck1r	55	56.479	Amphiprion_ocellaris
ENSONIG00000009626	-	100	76.642	ENSAOCG00000017464	sharpin	91	76.642	Amphiprion_ocellaris
ENSONIG00000009626	-	97	55.825	ENSAPEG00000023274	shrprbck1r	54	55.825	Amphiprion_percula
ENSONIG00000009626	-	100	76.886	ENSAPEG00000004049	sharpin	91	76.886	Amphiprion_percula
ENSONIG00000009626	-	100	76.156	ENSATEG00000007832	sharpin	83	76.156	Anabas_testudineus
ENSONIG00000009626	-	99	54.545	ENSATEG00000014561	shrprbck1r	55	55.024	Anabas_testudineus
ENSONIG00000009626	-	97	64.151	ENSACLG00000020160	-	84	63.158	Astatotilapia_calliptera
ENSONIG00000009626	-	97	54.878	ENSACLG00000022609	shrprbck1r	55	55.366	Astatotilapia_calliptera
ENSONIG00000009626	-	99	52.414	ENSAMXG00000021016	shrprbck1r	62	52.644	Astyanax_mexicanus
ENSONIG00000009626	-	99	53.306	ENSAMXG00000006229	sharpin	96	53.000	Astyanax_mexicanus
ENSONIG00000009626	-	97	50.980	ENSCSEG00000011306	shrprbck1r	54	52.451	Cynoglossus_semilaevis
ENSONIG00000009626	-	99	69.268	ENSCVAG00000006586	sharpin	90	69.268	Cyprinodon_variegatus
ENSONIG00000009626	-	97	53.398	ENSCVAG00000007250	shrprbck1r	55	53.398	Cyprinodon_variegatus
ENSONIG00000009626	-	98	47.755	ENSDARG00000076995	sharpin	94	49.502	Danio_rerio
ENSONIG00000009626	-	99	53.901	ENSDARG00000059871	shrprbck1r	85	53.901	Danio_rerio
ENSONIG00000009626	-	97	59.305	ENSELUG00000016022	shrprbck1r	55	59.305	Esox_lucius
ENSONIG00000009626	-	99	69.024	ENSFHEG00000013564	sharpin	90	69.024	Fundulus_heteroclitus
ENSONIG00000009626	-	100	69.681	ENSGMOG00000010123	sharpin	90	69.681	Gadus_morhua
ENSONIG00000009626	-	97	54.726	ENSGAFG00000009309	shrprbck1r	54	54.726	Gambusia_affinis
ENSONIG00000009626	-	98	70.423	ENSGAFG00000021405	sharpin	90	60.054	Gambusia_affinis
ENSONIG00000009626	-	97	54.878	ENSHBUG00000021933	shrprbck1r	55	55.610	Haplochromis_burtoni
ENSONIG00000009626	-	97	69.697	ENSHCOG00000018847	sharpin	75	69.975	Hippocampus_comes
ENSONIG00000009626	-	99	54.783	ENSIPUG00000011951	sharpin	99	54.177	Ictalurus_punctatus
ENSONIG00000009626	-	99	50.119	ENSIPUG00000014247	shrprbck1r	55	50.119	Ictalurus_punctatus
ENSONIG00000009626	-	100	72.837	ENSKMAG00000015204	sharpin	76	76.279	Kryptolebias_marmoratus
ENSONIG00000009626	-	97	54.964	ENSKMAG00000015215	shrprbck1r	55	54.964	Kryptolebias_marmoratus
ENSONIG00000009626	-	97	54.699	ENSLBEG00000016876	shrprbck1r	55	55.663	Labrus_bergylta
ENSONIG00000009626	-	100	75.728	ENSLBEG00000016624	sharpin	91	75.728	Labrus_bergylta
ENSONIG00000009626	-	97	45.643	ENSLACG00000010948	-	56	43.564	Latimeria_chalumnae
ENSONIG00000009626	-	96	58.374	ENSLOCG00000008910	shrprbck1r	55	58.374	Lepisosteus_oculatus
ENSONIG00000009626	-	100	62.973	ENSMAMG00000014645	sharpin	88	62.973	Mastacembelus_armatus
ENSONIG00000009626	-	97	55.037	ENSMAMG00000022930	shrprbck1r	55	55.283	Mastacembelus_armatus
ENSONIG00000009626	-	97	54.878	ENSMZEG00005021257	shrprbck1r	55	55.366	Maylandia_zebra
ENSONIG00000009626	-	97	53.365	ENSMMOG00000003764	shrprbck1r	54	53.365	Mola_mola
ENSONIG00000009626	-	97	72.222	ENSMMOG00000016788	sharpin	83	89.855	Mola_mola
ENSONIG00000009626	-	97	55.122	ENSMALG00000008861	shrprbck1r	55	55.122	Monopterus_albus
ENSONIG00000009626	-	94	68.627	ENSMALG00000020528	sharpin	90	58.333	Monopterus_albus
ENSONIG00000009626	-	97	54.337	ENSNBRG00000002270	shrprbck1r	55	54.458	Neolamprologus_brichardi
ENSONIG00000009626	-	97	79.717	ENSNBRG00000012382	sharpin	92	77.303	Neolamprologus_brichardi
ENSONIG00000009626	-	99	79.941	ENSORLG00000017281	sharpin	89	74.010	Oryzias_latipes
ENSONIG00000009626	-	97	54.015	ENSORLG00000007392	shrprbck1r	55	54.015	Oryzias_latipes
ENSONIG00000009626	-	99	73.710	ENSORLG00020000801	sharpin	90	73.710	Oryzias_latipes_hni
ENSONIG00000009626	-	97	53.027	ENSORLG00020018619	shrprbck1r	55	53.027	Oryzias_latipes_hni
ENSONIG00000009626	-	97	53.041	ENSORLG00015018865	shrprbck1r	55	53.041	Oryzias_latipes_hsok
ENSONIG00000009626	-	99	79.532	ENSORLG00015009860	sharpin	90	73.710	Oryzias_latipes_hsok
ENSONIG00000009626	-	97	75.000	ENSOMEG00000005729	sharpin	84	65.312	Oryzias_melastigma
ENSONIG00000009626	-	97	53.511	ENSOMEG00000012749	shrprbck1r	55	53.511	Oryzias_melastigma
ENSONIG00000009626	-	97	61.940	ENSPKIG00000006933	shrprbck1r	55	61.940	Paramormyrops_kingsleyae
ENSONIG00000009626	-	96	59.214	ENSPKIG00000018308	-	81	59.214	Paramormyrops_kingsleyae
ENSONIG00000009626	-	99	52.956	ENSPMGG00000013254	shrprbck1r	55	52.956	Periophthalmus_magnuspinnatus
ENSONIG00000009626	-	97	72.038	ENSPMGG00000019318	sharpin	88	86.957	Periophthalmus_magnuspinnatus
ENSONIG00000009626	-	97	54.167	ENSPFOG00000004214	shrprbck1r	81	54.167	Poecilia_formosa
ENSONIG00000009626	-	98	75.117	ENSPFOG00000015253	sharpin	90	73.316	Poecilia_formosa
ENSONIG00000009626	-	99	68.780	ENSPLAG00000000423	sharpin	90	68.780	Poecilia_latipinna
ENSONIG00000009626	-	97	54.167	ENSPLAG00000020523	shrprbck1r	54	54.167	Poecilia_latipinna
ENSONIG00000009626	-	97	54.568	ENSPMEG00000006877	shrprbck1r	54	54.568	Poecilia_mexicana
ENSONIG00000009626	-	100	66.071	ENSPMEG00000023030	sharpin	78	79.167	Poecilia_mexicana
ENSONIG00000009626	-	99	68.370	ENSPREG00000009702	sharpin	90	68.370	Poecilia_reticulata
ENSONIG00000009626	-	96	53.960	ENSPREG00000014689	shrprbck1r	54	53.960	Poecilia_reticulata
ENSONIG00000009626	-	97	54.878	ENSPNYG00000022601	shrprbck1r	55	55.366	Pundamilia_nyererei
ENSONIG00000009626	-	96	53.938	ENSPNAG00000007847	shrprbck1r	55	53.938	Pygocentrus_nattereri
ENSONIG00000009626	-	99	52.340	ENSPNAG00000002911	sharpin	99	52.417	Pygocentrus_nattereri
ENSONIG00000009626	-	98	63.084	ENSSFOG00015004028	sharpin	85	62.924	Scleropages_formosus
ENSONIG00000009626	-	97	54.479	ENSSMAG00000018085	shrprbck1r	55	55.206	Scophthalmus_maximus
ENSONIG00000009626	-	97	73.585	ENSSDUG00000019039	sharpin	90	67.196	Seriola_dumerili
ENSONIG00000009626	-	97	55.911	ENSSDUG00000002959	shrprbck1r	54	57.143	Seriola_dumerili
ENSONIG00000009626	-	97	54.878	ENSSLDG00000009026	shrprbck1r	55	56.098	Seriola_lalandi_dorsalis
ENSONIG00000009626	-	99	69.124	ENSSPAG00000021807	sharpin	90	69.637	Stegastes_partitus
ENSONIG00000009626	-	97	55.875	ENSSPAG00000016097	shrprbck1r	56	55.875	Stegastes_partitus
ENSONIG00000009626	-	97	52.555	ENSTRUG00000006949	shrprbck1r	53	53.041	Takifugu_rubripes
ENSONIG00000009626	-	100	75.946	ENSTRUG00000011046	sharpin	91	76.216	Takifugu_rubripes
ENSONIG00000009626	-	100	80.376	ENSTNIG00000008521	sharpin	98	80.376	Tetraodon_nigroviridis
ENSONIG00000009626	-	97	52.985	ENSXCOG00000006701	shrprbck1r	53	52.985	Xiphophorus_couchianus
ENSONIG00000009626	-	98	68.075	ENSXCOG00000015019	sharpin	78	79.167	Xiphophorus_couchianus
ENSONIG00000009626	-	97	52.736	ENSXMAG00000018972	shrprbck1r	53	52.736	Xiphophorus_maculatus
ENSONIG00000009626	-	99	69.024	ENSXMAG00000022076	sharpin	90	69.024	Xiphophorus_maculatus