EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSONIG00000009682 (Gene tree)
Gene ID
100708876
Gene Symbol
-
Alias
-
Full Name
splicing factor U2AF 65 kDa subunit
Gene Type
protein_coding
Species
Oreochromis_niloticus
Status
putative
Strand
Plus strand
Length
12016 bases
Position
chrGL831151.1:4641960-4653975
Accession
100708876
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSONIP00000012160RRM_1PF00076.229.1e-3513
ENSONIP00000012160RRM_1PF00076.229.1e-3523
ENSONIP00000012160RRM_1PF00076.229.1e-3533
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSONIT00000012169-1689-ENSONIP00000012160466 (aa)XP_003442643I3JTG5
Gene Model
Click here to download ENSONIG00000009682's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000009682's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSONIG00000009682-10072.881ENSONIG00000012793u2af2a9974.153
ENSONIG00000009682-6835.294ENSONIG00000014030-5835.294
ENSONIG00000009682-6237.255ENSONIG00000006247puf60b5137.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSONIG00000009682-10072.979ENSG00000063244U2AF29983.660Homo_sapiens
ENSONIG00000009682-10099.356ENSAPOG00000002208-10099.356Acanthochromis_polyacanthus
ENSONIG00000009682-6577.950ENSAPOG00000023155u2af2a9977.950Acanthochromis_polyacanthus
ENSONIG00000009682-7779.558ENSAMEG00000003864U2AF29875.802Ailuropoda_melanoleuca
ENSONIG00000009682-9797.386ENSACIG00000014173-9997.386Amphilophus_citrinellus
ENSONIG00000009682-8182.368ENSACIG00000005749u2af2a9280.808Amphilophus_citrinellus
ENSONIG00000009682-10099.785ENSAOCG00000003595-10099.785Amphiprion_ocellaris
ENSONIG00000009682-10075.745ENSAOCG00000015571u2af2a10075.106Amphiprion_ocellaris
ENSONIG00000009682-9897.363ENSAPEG00000020062-9897.363Amphiprion_percula
ENSONIG00000009682-8182.632ENSAPEG00000009376u2af2a9381.061Amphiprion_percula
ENSONIG00000009682-10075.687ENSATEG00000022332u2af2a9974.681Anabas_testudineus
ENSONIG00000009682-9799.556ENSATEG00000020577-9999.556Anabas_testudineus
ENSONIG00000009682-10073.885ENSACAG00000015489U2AF29975.847Anolis_carolinensis
ENSONIG00000009682-10070.248ENSANAG00000028042U2AF29974.656Aotus_nancymaae
ENSONIG00000009682-100100.000ENSACLG00000020793-100100.000Astatotilapia_calliptera
ENSONIG00000009682-10075.532ENSACLG00000022181u2af2a9974.894Astatotilapia_calliptera
ENSONIG00000009682-10070.231ENSAMXG00000033347u2af2a9971.130Astyanax_mexicanus
ENSONIG00000009682-10072.921ENSAMXG00000039454u2af2b9973.093Astyanax_mexicanus
ENSONIG00000009682-10074.145ENSBTAG00000002830U2AF29976.160Bos_taurus
ENSONIG00000009682-8357.289WBGene00006697uaf-110054.795Caenorhabditis_elegans
ENSONIG00000009682-10072.574ENSCJAG00000017128U2AF29975.949Callithrix_jacchus
ENSONIG00000009682-10072.979ENSCAFG00000002551U2AF29976.383Canis_familiaris
ENSONIG00000009682-8481.658ENSCAFG00020015445U2AF29575.385Canis_lupus_dingo
ENSONIG00000009682-8468.828ENSCHIG00000023595U2AF28768.828Capra_hircus
ENSONIG00000009682-10072.574ENSTSYG00000007432U2AF29975.949Carlito_syrichta
ENSONIG00000009682-8680.147ENSCAPG00000008466U2AF29876.718Cavia_aperea
ENSONIG00000009682-10072.785ENSCPOG00000001582U2AF29976.160Cavia_porcellus
ENSONIG00000009682-10072.574ENSCCAG00000023336U2AF29975.949Cebus_capucinus
ENSONIG00000009682-10072.979ENSCATG00000004637U2AF29976.383Cercocebus_atys
ENSONIG00000009682-10072.979ENSCLAG00000000596U2AF29976.383Chinchilla_lanigera
ENSONIG00000009682-10072.979ENSCSAG00000001722U2AF29976.383Chlorocebus_sabaeus
ENSONIG00000009682-8779.277ENSCPBG00000004485U2AF29983.660Chrysemys_picta_bellii
ENSONIG00000009682-8370.876ENSCING00000003455-8665.402Ciona_intestinalis
ENSONIG00000009682-8368.718ENSCSAVG00000006813-9362.281Ciona_savignyi
ENSONIG00000009682-9172.196ENSCANG00000031002-9675.935Colobus_angolensis_palliatus
ENSONIG00000009682-10067.635ENSCANG00000043845-9972.246Colobus_angolensis_palliatus
ENSONIG00000009682-10070.149ENSCGRG00001007486-9971.002Cricetulus_griseus_chok1gshd
ENSONIG00000009682-10074.145ENSCGRG00001003185-9975.949Cricetulus_griseus_chok1gshd
ENSONIG00000009682-5180.498ENSCGRG00000004524-8277.866Cricetulus_griseus_crigri
ENSONIG00000009682-10070.149ENSCGRG00000018587-9971.002Cricetulus_griseus_crigri
ENSONIG00000009682-6475.000ENSCSEG00000018709u2af2a9375.000Cynoglossus_semilaevis
ENSONIG00000009682-10091.631ENSCSEG00000020504-9491.845Cynoglossus_semilaevis
ENSONIG00000009682-10075.745ENSCVAG00000001259u2af2a9974.894Cyprinodon_variegatus
ENSONIG00000009682-10098.069ENSCVAG00000023307-10098.069Cyprinodon_variegatus
ENSONIG00000009682-10072.281ENSDARG00000012505u2af2a9973.617Danio_rerio
ENSONIG00000009682-10074.105ENSDARG00000011740u2af2b9972.211Danio_rerio
ENSONIG00000009682-9172.196ENSDNOG00000047039U2AF29675.935Dasypus_novemcinctus
ENSONIG00000009682-10072.574ENSDORG00000003250U2af29975.949Dipodomys_ordii
ENSONIG00000009682-8272.680FBgn0005411U2af5010072.826Drosophila_melanogaster
ENSONIG00000009682-8254.094FBgn0034834LS28754.094Drosophila_melanogaster
ENSONIG00000009682-8763.081ENSEBUG00000001732U2AF29459.508Eptatretus_burgeri
ENSONIG00000009682-8971.703ENSEBUG00000010917U2AF210067.300Eptatretus_burgeri
ENSONIG00000009682-8481.818ENSEASG00005020708U2AF28876.222Equus_asinus_asinus
ENSONIG00000009682-10074.145ENSECAG00000010110U2AF29975.693Equus_caballus
ENSONIG00000009682-10074.274ENSELUG00000015850u2af2a9973.431Esox_lucius
ENSONIG00000009682-10071.975ENSELUG00000022291u2af2b9971.882Esox_lucius
ENSONIG00000009682-10092.918ENSELUG00000018459-10092.918Esox_lucius
ENSONIG00000009682-10072.574ENSFCAG00000011504U2AF29975.949Felis_catus
ENSONIG00000009682-8680.147ENSFDAG00000011264U2AF29576.718Fukomys_damarensis
ENSONIG00000009682-10074.790ENSFHEG00000016025u2af2a9974.468Fundulus_heteroclitus
ENSONIG00000009682-10073.248ENSGMOG00000004535u2af2a9973.418Gadus_morhua
ENSONIG00000009682-9873.913ENSGALG00000052748U2AF26575.922Gallus_gallus
ENSONIG00000009682-10093.777ENSGAFG00000005628-10093.133Gambusia_affinis
ENSONIG00000009682-10075.745ENSGAFG00000013626u2af2a8874.894Gambusia_affinis
ENSONIG00000009682-10074.359ENSGACG00000010632U2AF29974.200Gasterosteus_aculeatus
ENSONIG00000009682-10087.049ENSGACG00000014500-10087.898Gasterosteus_aculeatus
ENSONIG00000009682-6583.660ENSGAGG00000011849U2AF29983.660Gopherus_agassizii
ENSONIG00000009682-5574.219ENSGGOG00000036399-9674.219Gorilla_gorilla
ENSONIG00000009682-100100.000ENSHBUG00000017424-100100.000Haplochromis_burtoni
ENSONIG00000009682-10075.532ENSHBUG00000013935u2af2a9974.894Haplochromis_burtoni
ENSONIG00000009682-10072.574ENSHGLG00000005889U2AF29975.949Heterocephalus_glaber_female
ENSONIG00000009682-8679.902ENSHGLG00100004757U2AF29876.497Heterocephalus_glaber_male
ENSONIG00000009682-10073.431ENSHCOG00000019367u2af2a9973.319Hippocampus_comes
ENSONIG00000009682-10072.708ENSIPUG00000009077u2af29972.708Ictalurus_punctatus
ENSONIG00000009682-10071.215ENSIPUG00000007717u2af2a9971.702Ictalurus_punctatus
ENSONIG00000009682-10087.124ENSIPUG00000009844-10086.695Ictalurus_punctatus
ENSONIG00000009682-10072.574ENSSTOG00000019595U2AF29975.949Ictidomys_tridecemlineatus
ENSONIG00000009682-10072.574ENSJJAG00000017705U2af29975.949Jaculus_jaculus
ENSONIG00000009682-10075.687ENSKMAG00000005960u2af2a9974.681Kryptolebias_marmoratus
ENSONIG00000009682-9795.207ENSLBEG00000005001-9995.207Labrus_bergylta
ENSONIG00000009682-10075.745ENSLBEG00000016162u2af2a9974.894Labrus_bergylta
ENSONIG00000009682-7883.060ENSLACG00000001648U2AF29983.060Latimeria_chalumnae
ENSONIG00000009682-10091.845ENSLOCG00000010843-10091.845Lepisosteus_oculatus
ENSONIG00000009682-5982.971ENSLOCG00000008050u2af2b8181.625Lepisosteus_oculatus
ENSONIG00000009682-10073.404ENSLAFG00000018056-9976.383Loxodonta_africana
ENSONIG00000009682-10069.068ENSLAFG00000028496-9968.298Loxodonta_africana
ENSONIG00000009682-10072.574ENSMFAG00000038383U2AF29975.949Macaca_fascicularis
ENSONIG00000009682-10072.363ENSMMUG00000004810U2AF29975.738Macaca_mulatta
ENSONIG00000009682-10072.979ENSMNEG00000042096U2AF29976.383Macaca_nemestrina
ENSONIG00000009682-8680.446ENSMLEG00000032219U2AF28776.957Mandrillus_leucophaeus
ENSONIG00000009682-10096.567ENSMAMG00000020158-10096.567Mastacembelus_armatus
ENSONIG00000009682-10072.421ENSMAMG00000019817u2af2a9974.049Mastacembelus_armatus
ENSONIG00000009682-10075.532ENSMZEG00005016563u2af2a9974.894Maylandia_zebra
ENSONIG00000009682-100100.000ENSMZEG00005023318-100100.000Maylandia_zebra
ENSONIG00000009682-8679.902ENSMAUG00000008180U2af29676.497Mesocricetus_auratus
ENSONIG00000009682-10072.979ENSMICG00000027681U2AF29976.383Microcebus_murinus
ENSONIG00000009682-10072.574ENSMOCG00000013214-9975.949Microtus_ochrogaster
ENSONIG00000009682-10069.068ENSMOCG00000007227-8476.020Microtus_ochrogaster
ENSONIG00000009682-6580.719ENSMOCG00000001018-9980.719Microtus_ochrogaster
ENSONIG00000009682-10079.418ENSMMOG00000000531-10078.542Mola_mola
ENSONIG00000009682-8182.632ENSMMOG00000016600u2af2a9181.061Mola_mola
ENSONIG00000009682-10073.932ENSMALG00000009985u2af2a9974.894Monopterus_albus
ENSONIG00000009682-10072.979MGP_CAROLIEiJ_G0029150U2af29976.383Mus_caroli
ENSONIG00000009682-10072.979ENSMUSG00000030435U2af29983.660Mus_musculus
ENSONIG00000009682-10072.979MGP_PahariEiJ_G0021017U2af29976.383Mus_pahari
ENSONIG00000009682-10072.979MGP_SPRETEiJ_G0030203U2af29976.383Mus_spretus
ENSONIG00000009682-10072.979ENSMPUG00000007135U2AF29976.383Mustela_putorius_furo
ENSONIG00000009682-5079.167ENSMLUG00000011051-9979.167Myotis_lucifugus
ENSONIG00000009682-10072.574ENSNGAG00000020369U2af29975.949Nannospalax_galili
ENSONIG00000009682-9798.039ENSNBRG00000011100-9998.039Neolamprologus_brichardi
ENSONIG00000009682-10075.532ENSNBRG00000002568u2af2a9974.894Neolamprologus_brichardi
ENSONIG00000009682-10064.979ENSNLEG00000010562U2AF29983.660Nomascus_leucogenys
ENSONIG00000009682-8669.059ENSMEUG00000002346U2AF29866.667Notamacropus_eugenii
ENSONIG00000009682-9856.494ENSODEG00000009254-8365.301Octodon_degus
ENSONIG00000009682-10067.511ENSODEG00000012729-9970.886Octodon_degus
ENSONIG00000009682-10074.310ENSORLG00000011545u2af2a9973.774Oryzias_latipes
ENSONIG00000009682-10074.310ENSORLG00020006941u2af2a9973.774Oryzias_latipes_hni
ENSONIG00000009682-10074.310ENSORLG00015012843u2af2a9973.774Oryzias_latipes_hsok
ENSONIG00000009682-10076.333ENSOMEG00000011386u2af2a9975.561Oryzias_melastigma
ENSONIG00000009682-8254.499ENSOGAG00000034729-8154.499Otolemur_garnettii
ENSONIG00000009682-10072.574ENSOGAG00000007206-9975.949Otolemur_garnettii
ENSONIG00000009682-10069.231ENSOARG00000001091U2AF29969.895Ovis_aries
ENSONIG00000009682-10072.574ENSPPAG00000039782U2AF29975.949Pan_paniscus
ENSONIG00000009682-10072.574ENSPPRG00000013843U2AF29975.949Panthera_pardus
ENSONIG00000009682-9969.231ENSPTIG00000005489U2AF28776.427Panthera_tigris_altaica
ENSONIG00000009682-10072.574ENSPTRG00000011523U2AF29983.660Pan_troglodytes
ENSONIG00000009682-10072.979ENSPANG00000008459U2AF29976.383Papio_anubis
ENSONIG00000009682-10072.939ENSPKIG00000024346u2af2b9180.151Paramormyrops_kingsleyae
ENSONIG00000009682-10091.631ENSPKIG00000014878-10091.631Paramormyrops_kingsleyae
ENSONIG00000009682-8461.125ENSPSIG00000008014U2AF29858.225Pelodiscus_sinensis
ENSONIG00000009682-8175.385ENSPMGG00000022980u2af2a9869.518Periophthalmus_magnuspinnatus
ENSONIG00000009682-10072.574ENSPEMG00000007378U2af29983.660Peromyscus_maniculatus_bairdii
ENSONIG00000009682-8178.385ENSPMAG00000004097u2af2a9873.510Petromyzon_marinus
ENSONIG00000009682-10072.785ENSPCIG00000018013U2AF29976.160Phascolarctos_cinereus
ENSONIG00000009682-10095.708ENSPFOG00000006433-10095.708Poecilia_formosa
ENSONIG00000009682-10075.745ENSPFOG00000010799u2af2a10074.894Poecilia_formosa
ENSONIG00000009682-10075.745ENSPLAG00000014365u2af2a9974.894Poecilia_latipinna
ENSONIG00000009682-9795.778ENSPLAG00000003275-9895.778Poecilia_latipinna
ENSONIG00000009682-10075.745ENSPMEG00000002969u2af2a9974.894Poecilia_mexicana
ENSONIG00000009682-9795.111ENSPMEG00000003734-9895.111Poecilia_mexicana
ENSONIG00000009682-10075.745ENSPREG00000008739u2af2a9974.894Poecilia_reticulata
ENSONIG00000009682-10096.781ENSPREG00000013036-10096.575Poecilia_reticulata
ENSONIG00000009682-5882.482ENSPPYG00000010429-7782.482Pongo_abelii
ENSONIG00000009682-10058.737ENSPCAG00000014399-9962.105Procavia_capensis
ENSONIG00000009682-8472.704ENSPCAG00000003709-9672.704Procavia_capensis
ENSONIG00000009682-10072.574ENSPCOG00000025870U2AF29975.949Propithecus_coquereli
ENSONIG00000009682-10072.363ENSPVAG00000004540U2AF29975.738Pteropus_vampyrus
ENSONIG00000009682-10075.532ENSPNYG00000001438u2af2a9974.894Pundamilia_nyererei
ENSONIG00000009682-100100.000ENSPNYG00000011605-100100.000Pundamilia_nyererei
ENSONIG00000009682-10094.635ENSPNAG00000007182-10094.635Pygocentrus_nattereri
ENSONIG00000009682-10071.822ENSPNAG00000017620u2af2a9973.617Pygocentrus_nattereri
ENSONIG00000009682-10073.561ENSPNAG00000027289u2af2b9974.043Pygocentrus_nattereri
ENSONIG00000009682-10072.979ENSRNOG00000015914U2af29976.383Rattus_norvegicus
ENSONIG00000009682-10072.363ENSRBIG00000041018U2AF29975.738Rhinopithecus_bieti
ENSONIG00000009682-10069.787ENSRROG00000031238-9971.915Rhinopithecus_roxellana
ENSONIG00000009682-7976.486ENSRROG00000031103-9976.225Rhinopithecus_roxellana
ENSONIG00000009682-10072.979ENSSBOG00000023891U2AF29976.383Saimiri_boliviensis_boliviensis
ENSONIG00000009682-5171.378ENSSHAG00000001167U2AF26571.378Sarcophilus_harrisii
ENSONIG00000009682-8481.313ENSSFOG00015019182u2af2b8981.313Scleropages_formosus
ENSONIG00000009682-10092.060ENSSFOG00015003884-10092.060Scleropages_formosus
ENSONIG00000009682-10097.210ENSSMAG00000013779-10097.210Scophthalmus_maximus
ENSONIG00000009682-10074.160ENSSMAG00000012582u2af2a9973.830Scophthalmus_maximus
ENSONIG00000009682-9797.180ENSSDUG00000021434-9497.180Seriola_dumerili
ENSONIG00000009682-10075.532ENSSDUG00000009457u2af2a10074.894Seriola_dumerili
ENSONIG00000009682-9797.180ENSSLDG00000016151-9997.180Seriola_lalandi_dorsalis
ENSONIG00000009682-10075.532ENSSLDG00000022742u2af2a9974.894Seriola_lalandi_dorsalis
ENSONIG00000009682-10071.849ENSSPUG00000010229U2AF29974.423Sphenodon_punctatus
ENSONIG00000009682-10099.571ENSSPAG00000005241-10099.571Stegastes_partitus
ENSONIG00000009682-10075.745ENSSPAG00000022519u2af2a9975.106Stegastes_partitus
ENSONIG00000009682-10074.145ENSSSCG00000034815U2AF29976.383Sus_scrofa
ENSONIG00000009682-8180.789ENSTRUG00000005514u2af2a9773.991Takifugu_rubripes
ENSONIG00000009682-10074.573ENSTNIG00000008106U2AF29974.573Tetraodon_nigroviridis
ENSONIG00000009682-10088.865ENSTNIG00000011257-10088.889Tetraodon_nigroviridis
ENSONIG00000009682-7777.135ENSTBEG00000009104U2AF29778.151Tupaia_belangeri
ENSONIG00000009682-10072.574ENSTTRG00000000987U2AF29975.949Tursiops_truncatus
ENSONIG00000009682-8481.818ENSUAMG00000019883U2AF29975.831Ursus_americanus
ENSONIG00000009682-8481.818ENSUMAG00000024586U2AF29983.660Ursus_maritimus
ENSONIG00000009682-9775.771ENSVVUG00000006956U2AF26576.957Vulpes_vulpes
ENSONIG00000009682-10074.214ENSXETG00000019128u2af29974.059Xenopus_tropicalis
ENSONIG00000009682-8182.632ENSXCOG00000019406u2af2a9975.561Xiphophorus_couchianus
ENSONIG00000009682-10075.745ENSXMAG00000011979u2af2a9974.894Xiphophorus_maculatus
ENSONIG00000009682-10096.567ENSXMAG00000000768-9696.567Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us