EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000009854 (Gene tree)
Gene ID: -
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 19855 bases
Position: chrGL831151.1:6289017-6308871
Accession: ZDB-GENE-080521-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000012381	RRM_1	PF00076.22	6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000012390	-	6176	-	ENSONIP00000012381	1928 (aa)	-	I3JU36

Gene Model

Click here to download ENSONIG00000009854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000009854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000009854	setd1a	85	87.356	ENSACIG00000007144	setd1a	86	89.881	Amphilophus_citrinellus
ENSONIG00000009854	setd1a	63	64.311	ENSCPBG00000010830	-	69	63.918	Chrysemys_picta_bellii
ENSONIG00000009854	setd1a	85	74.503	ENSELUG00000020261	setd1a	84	74.503	Esox_lucius
ENSONIG00000009854	setd1a	88	80.952	ENSFHEG00000023258	setd1a	83	99.444	Fundulus_heteroclitus
ENSONIG00000009854	setd1a	71	90.184	ENSGAFG00000011698	setd1a	63	92.857	Gambusia_affinis
ENSONIG00000009854	setd1a	71	86.111	ENSGACG00000013688	setd1a	82	85.965	Gasterosteus_aculeatus
ENSONIG00000009854	setd1a	74	80.000	ENSHCOG00000003119	setd1a	84	89.836	Hippocampus_comes
ENSONIG00000009854	setd1a	75	84.351	ENSMAMG00000021851	setd1a	96	84.291	Mastacembelus_armatus
ENSONIG00000009854	setd1a	91	89.667	ENSMZEG00005023141	setd1a	86	89.667	Maylandia_zebra
ENSONIG00000009854	setd1a	82	83.912	ENSMMOG00000016992	setd1a	83	87.216	Mola_mola
ENSONIG00000009854	setd1a	92	74.850	ENSMALG00000007401	setd1a	85	74.273	Monopterus_albus
ENSONIG00000009854	setd1a	91	89.899	ENSNBRG00000004760	setd1a	87	89.899	Neolamprologus_brichardi
ENSONIG00000009854	setd1a	88	82.392	ENSPMEG00000005864	setd1a	86	82.392	Poecilia_mexicana
ENSONIG00000009854	setd1a	88	81.457	ENSPREG00000010201	setd1a	84	82.781	Poecilia_reticulata
ENSONIG00000009854	setd1a	91	89.333	ENSPNYG00000014139	setd1a	86	89.333	Pundamilia_nyererei
ENSONIG00000009854	setd1a	88	85.714	ENSSDUG00000022142	setd1a	85	85.714	Seriola_dumerili
ENSONIG00000009854	setd1a	74	92.157	ENSTNIG00000014930	setd1a	63	64.983	Tetraodon_nigroviridis
ENSONIG00000009854	setd1a	85	83.219	ENSXCOG00000017585	setd1a	83	83.165	Xiphophorus_couchianus
ENSONIG00000009854	setd1a	88	82.724	ENSXMAG00000008021	setd1a	86	82.724	Xiphophorus_maculatus