EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000009910 (Gene tree)
Gene ID: -
Gene Symbol: utp20
Alias: -
Full Name: UTP20 small subunit (SSU) processome component
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 28877 bases
Position: chrGL831168.1:2389866-2418742
Accession: ZDB-GENE-080225-38
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000012457	DRIM	PF07539.12	9.2e-179	1	1
ENSONIP00000012456	DRIM	PF07539.12	1.6e-178	1	1
ENSONIP00000012454	DRIM	PF07539.12	1.6e-178	1	1
ENSONIP00000012455	DRIM	PF07539.12	1.6e-178	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000012466	-	6201	-	ENSONIP00000012457	2067 (aa)	-	I3JUB2
ENSONIT00000012465	-	8430	-	ENSONIP00000012456	2809 (aa)	-	I3JUB1
ENSONIT00000012464	-	8445	-	ENSONIP00000012455	2814 (aa)	-	I3JUB0
ENSONIT00000012463	-	11894	-	ENSONIP00000012454	2813 (aa)	-	I3JUA9

Gene Model

Click here to download ENSONIG00000009910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000009910's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000009910	utp20	100	56.326	ENSG00000120800	UTP20	92	55.952	Homo_sapiens
ENSONIG00000009910	utp20	100	83.687	ENSAPOG00000002429	utp20	100	83.499	Acanthochromis_polyacanthus
ENSONIG00000009910	utp20	100	56.440	ENSAMEG00000016416	UTP20	100	56.733	Ailuropoda_melanoleuca
ENSONIG00000009910	utp20	100	89.224	ENSACIG00000007987	utp20	100	89.019	Amphilophus_citrinellus
ENSONIG00000009910	utp20	82	82.048	ENSAOCG00000015055	utp20	96	83.019	Amphiprion_ocellaris
ENSONIG00000009910	utp20	100	83.245	ENSAPEG00000011605	utp20	100	83.245	Amphiprion_percula
ENSONIG00000009910	utp20	98	81.471	ENSATEG00000005601	utp20	100	81.399	Anabas_testudineus
ENSONIG00000009910	utp20	99	58.121	ENSAPLG00000015651	UTP20	92	57.192	Anas_platyrhynchos
ENSONIG00000009910	utp20	100	56.825	ENSACAG00000011671	UTP20	100	56.704	Anolis_carolinensis
ENSONIG00000009910	utp20	100	54.807	ENSANAG00000027152	UTP20	100	55.119	Aotus_nancymaae
ENSONIG00000009910	utp20	95	96.741	ENSACLG00000008064	utp20	99	96.741	Astatotilapia_calliptera
ENSONIG00000009910	utp20	100	67.125	ENSAMXG00000021039	utp20	100	67.019	Astyanax_mexicanus
ENSONIG00000009910	utp20	100	56.966	ENSBTAG00000003239	UTP20	99	57.904	Bos_taurus
ENSONIG00000009910	utp20	85	32.468	WBGene00007050	utp-20	84	32.258	Caenorhabditis_elegans
ENSONIG00000009910	utp20	100	56.442	ENSCJAG00000001913	UTP20	100	56.088	Callithrix_jacchus
ENSONIG00000009910	utp20	100	56.195	ENSCAFG00000006964	UTP20	100	56.712	Canis_familiaris
ENSONIG00000009910	utp20	100	56.195	ENSCAFG00020024305	UTP20	100	56.712	Canis_lupus_dingo
ENSONIG00000009910	utp20	100	56.747	ENSCHIG00000009221	UTP20	100	56.458	Capra_hircus
ENSONIG00000009910	utp20	100	55.772	ENSTSYG00000003040	UTP20	100	56.084	Carlito_syrichta
ENSONIG00000009910	utp20	99	53.789	ENSCAPG00000014920	UTP20	100	53.319	Cavia_aperea
ENSONIG00000009910	utp20	100	55.524	ENSCPOG00000003129	UTP20	100	54.648	Cavia_porcellus
ENSONIG00000009910	utp20	100	55.840	ENSCCAG00000031422	UTP20	100	55.697	Cebus_capucinus
ENSONIG00000009910	utp20	100	54.504	ENSCATG00000035636	UTP20	100	54.710	Cercocebus_atys
ENSONIG00000009910	utp20	100	56.341	ENSCLAG00000011569	UTP20	100	55.709	Chinchilla_lanigera
ENSONIG00000009910	utp20	100	56.574	ENSCSAG00000003388	UTP20	100	56.509	Chlorocebus_sabaeus
ENSONIG00000009910	utp20	92	72.727	ENSCHOG00000003532	UTP20	94	72.727	Choloepus_hoffmanni
ENSONIG00000009910	utp20	95	58.278	ENSCPBG00000004844	UTP20	99	57.641	Chrysemys_picta_bellii
ENSONIG00000009910	utp20	92	30.913	ENSCSAVG00000008252	-	99	32.228	Ciona_savignyi
ENSONIG00000009910	utp20	97	57.654	ENSCANG00000034768	UTP20	99	55.836	Colobus_angolensis_palliatus
ENSONIG00000009910	utp20	100	55.824	ENSCGRG00001017151	Utp20	100	55.812	Cricetulus_griseus_chok1gshd
ENSONIG00000009910	utp20	100	55.611	ENSCGRG00000008595	Utp20	100	55.599	Cricetulus_griseus_crigri
ENSONIG00000009910	utp20	100	74.664	ENSCSEG00000014760	utp20	95	76.235	Cynoglossus_semilaevis
ENSONIG00000009910	utp20	99	77.276	ENSCVAG00000001727	utp20	100	77.311	Cyprinodon_variegatus
ENSONIG00000009910	utp20	99	66.171	ENSDARG00000099280	utp20	99	66.337	Danio_rerio
ENSONIG00000009910	utp20	100	56.299	ENSDNOG00000016845	UTP20	100	56.552	Dasypus_novemcinctus
ENSONIG00000009910	utp20	97	59.270	ENSDORG00000014762	Utp20	99	59.186	Dipodomys_ordii
ENSONIG00000009910	utp20	89	76.087	ENSETEG00000019983	UTP20	89	76.087	Echinops_telfairi
ENSONIG00000009910	utp20	100	56.321	ENSEASG00005019981	UTP20	100	56.476	Equus_asinus_asinus
ENSONIG00000009910	utp20	100	56.321	ENSECAG00000006876	UTP20	100	56.476	Equus_caballus
ENSONIG00000009910	utp20	71	64.286	ENSEEUG00000003774	UTP20	75	61.765	Erinaceus_europaeus
ENSONIG00000009910	utp20	100	71.110	ENSELUG00000000798	utp20	100	71.130	Esox_lucius
ENSONIG00000009910	utp20	100	56.157	ENSFCAG00000006150	UTP20	100	56.239	Felis_catus
ENSONIG00000009910	utp20	94	56.348	ENSFALG00000011135	UTP20	100	56.039	Ficedula_albicollis
ENSONIG00000009910	utp20	89	66.942	ENSFDAG00000007567	UTP20	97	66.942	Fukomys_damarensis
ENSONIG00000009910	utp20	98	74.271	ENSFHEG00000004142	utp20	100	78.367	Fundulus_heteroclitus
ENSONIG00000009910	utp20	100	66.907	ENSGMOG00000006762	utp20	100	67.140	Gadus_morhua
ENSONIG00000009910	utp20	100	57.022	ENSGALG00000011643	UTP20	100	57.193	Gallus_gallus
ENSONIG00000009910	utp20	98	77.001	ENSGAFG00000006986	utp20	100	76.710	Gambusia_affinis
ENSONIG00000009910	utp20	100	77.266	ENSGACG00000019092	utp20	100	77.919	Gasterosteus_aculeatus
ENSONIG00000009910	utp20	67	60.656	ENSGAGG00000011169	UTP20	97	59.810	Gopherus_agassizii
ENSONIG00000009910	utp20	100	55.773	ENSGGOG00000004904	UTP20	92	55.393	Gorilla_gorilla
ENSONIG00000009910	utp20	100	94.597	ENSHBUG00000010613	utp20	100	94.597	Haplochromis_burtoni
ENSONIG00000009910	utp20	100	55.465	ENSHGLG00000006422	UTP20	100	55.136	Heterocephalus_glaber_female
ENSONIG00000009910	utp20	100	54.097	ENSHGLG00100001086	UTP20	100	53.740	Heterocephalus_glaber_male
ENSONIG00000009910	utp20	97	76.282	ENSHCOG00000005421	utp20	99	76.603	Hippocampus_comes
ENSONIG00000009910	utp20	100	66.327	ENSIPUG00000013717	utp20	100	65.773	Ictalurus_punctatus
ENSONIG00000009910	utp20	100	57.371	ENSSTOG00000015995	UTP20	100	57.270	Ictidomys_tridecemlineatus
ENSONIG00000009910	utp20	100	55.252	ENSJJAG00000019321	Utp20	92	55.380	Jaculus_jaculus
ENSONIG00000009910	utp20	100	75.264	ENSKMAG00000005972	utp20	100	75.548	Kryptolebias_marmoratus
ENSONIG00000009910	utp20	98	80.173	ENSLBEG00000000781	utp20	100	80.605	Labrus_bergylta
ENSONIG00000009910	utp20	99	58.425	ENSLACG00000010098	UTP20	99	60.297	Latimeria_chalumnae
ENSONIG00000009910	utp20	88	79.070	ENSLOCG00000015197	utp20	93	79.070	Lepisosteus_oculatus
ENSONIG00000009910	utp20	100	56.334	ENSLAFG00000012983	UTP20	100	55.779	Loxodonta_africana
ENSONIG00000009910	utp20	100	56.468	ENSMFAG00000037766	UTP20	100	56.448	Macaca_fascicularis
ENSONIG00000009910	utp20	100	56.503	ENSMMUG00000012891	UTP20	100	56.483	Macaca_mulatta
ENSONIG00000009910	utp20	100	54.940	ENSMNEG00000037418	UTP20	100	55.169	Macaca_nemestrina
ENSONIG00000009910	utp20	100	54.688	ENSMLEG00000029148	UTP20	100	55.165	Mandrillus_leucophaeus
ENSONIG00000009910	utp20	100	80.772	ENSMAMG00000002063	utp20	100	80.651	Mastacembelus_armatus
ENSONIG00000009910	utp20	100	95.450	ENSMZEG00005018123	utp20	100	95.450	Maylandia_zebra
ENSONIG00000009910	utp20	100	57.022	ENSMGAG00000011726	UTP20	100	57.218	Meleagris_gallopavo
ENSONIG00000009910	utp20	88	54.183	ENSMAUG00000011898	Utp20	99	55.036	Mesocricetus_auratus
ENSONIG00000009910	utp20	100	54.613	ENSMICG00000015736	UTP20	100	54.684	Microcebus_murinus
ENSONIG00000009910	utp20	100	54.858	ENSMOCG00000015242	Utp20	100	54.830	Microtus_ochrogaster
ENSONIG00000009910	utp20	100	73.126	ENSMMOG00000003360	utp20	100	72.981	Mola_mola
ENSONIG00000009910	utp20	100	56.149	ENSMODG00000003141	UTP20	100	56.608	Monodelphis_domestica
ENSONIG00000009910	utp20	100	80.156	ENSMALG00000002723	utp20	100	80.263	Monopterus_albus
ENSONIG00000009910	utp20	100	55.619	MGP_CAROLIEiJ_G0015713	Utp20	100	56.112	Mus_caroli
ENSONIG00000009910	utp20	100	55.863	ENSMUSG00000004356	Utp20	100	56.266	Mus_musculus
ENSONIG00000009910	utp20	100	55.627	MGP_PahariEiJ_G0031372	Utp20	100	56.168	Mus_pahari
ENSONIG00000009910	utp20	100	55.807	MGP_SPRETEiJ_G0016531	Utp20	93	71.429	Mus_spretus
ENSONIG00000009910	utp20	100	57.133	ENSMPUG00000011641	UTP20	100	56.600	Mustela_putorius_furo
ENSONIG00000009910	utp20	100	56.466	ENSMLUG00000002313	UTP20	100	56.409	Myotis_lucifugus
ENSONIG00000009910	utp20	100	55.717	ENSNGAG00000013738	Utp20	100	56.381	Nannospalax_galili
ENSONIG00000009910	utp20	80	100.000	ENSNBRG00000019464	utp20	99	100.000	Neolamprologus_brichardi
ENSONIG00000009910	utp20	100	56.374	ENSNLEG00000006166	UTP20	100	56.239	Nomascus_leucogenys
ENSONIG00000009910	utp20	87	81.481	ENSMEUG00000015457	UTP20	79	60.976	Notamacropus_eugenii
ENSONIG00000009910	utp20	85	77.707	ENSOPRG00000010546	UTP20	85	77.707	Ochotona_princeps
ENSONIG00000009910	utp20	100	56.053	ENSODEG00000013411	UTP20	100	55.335	Octodon_degus
ENSONIG00000009910	utp20	99	57.006	ENSOANG00000005578	UTP20	99	56.854	Ornithorhynchus_anatinus
ENSONIG00000009910	utp20	100	56.525	ENSOCUG00000010475	UTP20	100	56.499	Oryctolagus_cuniculus
ENSONIG00000009910	utp20	97	75.794	ENSORLG00000008900	utp20	100	73.291	Oryzias_latipes
ENSONIG00000009910	utp20	96	75.694	ENSORLG00020005879	utp20	100	74.268	Oryzias_latipes_hni
ENSONIG00000009910	utp20	100	71.819	ENSORLG00015002843	utp20	100	71.501	Oryzias_latipes_hsok
ENSONIG00000009910	utp20	98	74.703	ENSOMEG00000023583	utp20	100	74.847	Oryzias_melastigma
ENSONIG00000009910	utp20	100	55.963	ENSOGAG00000015130	UTP20	100	55.980	Otolemur_garnettii
ENSONIG00000009910	utp20	100	56.818	ENSOARG00000014722	UTP20	92	56.835	Ovis_aries
ENSONIG00000009910	utp20	100	56.270	ENSPPAG00000001381	UTP20	100	56.133	Pan_paniscus
ENSONIG00000009910	utp20	100	56.197	ENSPPRG00000001026	UTP20	100	56.310	Panthera_pardus
ENSONIG00000009910	utp20	100	56.126	ENSPTIG00000020972	UTP20	100	56.274	Panthera_tigris_altaica
ENSONIG00000009910	utp20	100	56.326	ENSPTRG00000005349	UTP20	92	55.952	Pan_troglodytes
ENSONIG00000009910	utp20	100	56.432	ENSPANG00000020388	UTP20	100	56.398	Papio_anubis
ENSONIG00000009910	utp20	100	65.595	ENSPKIG00000007196	utp20	100	65.340	Paramormyrops_kingsleyae
ENSONIG00000009910	utp20	94	57.786	ENSPSIG00000016689	UTP20	100	57.266	Pelodiscus_sinensis
ENSONIG00000009910	utp20	100	75.380	ENSPMGG00000004066	utp20	100	75.450	Periophthalmus_magnuspinnatus
ENSONIG00000009910	utp20	100	56.625	ENSPEMG00000024120	Utp20	100	57.128	Peromyscus_maniculatus_bairdii
ENSONIG00000009910	utp20	100	55.685	ENSPCIG00000009298	UTP20	99	57.537	Phascolarctos_cinereus
ENSONIG00000009910	utp20	93	79.250	ENSPFOG00000003312	utp20	100	79.548	Poecilia_formosa
ENSONIG00000009910	utp20	99	77.959	ENSPLAG00000012874	utp20	100	77.905	Poecilia_latipinna
ENSONIG00000009910	utp20	98	73.545	ENSPMEG00000005915	utp20	100	77.701	Poecilia_mexicana
ENSONIG00000009910	utp20	98	76.451	ENSPREG00000013285	utp20	100	76.098	Poecilia_reticulata
ENSONIG00000009910	utp20	99	55.593	ENSPPYG00000004871	UTP20	100	56.345	Pongo_abelii
ENSONIG00000009910	utp20	80	71.717	ENSPCAG00000012791	UTP20	82	71.717	Procavia_capensis
ENSONIG00000009910	utp20	96	57.077	ENSPCOG00000024948	UTP20	100	56.167	Propithecus_coquereli
ENSONIG00000009910	utp20	100	55.304	ENSPVAG00000008113	UTP20	100	55.410	Pteropus_vampyrus
ENSONIG00000009910	utp20	100	94.584	ENSPNYG00000011561	utp20	100	94.584	Pundamilia_nyererei
ENSONIG00000009910	utp20	100	66.984	ENSPNAG00000006176	utp20	100	66.772	Pygocentrus_nattereri
ENSONIG00000009910	utp20	100	55.481	ENSRNOG00000005823	Utp20	100	56.128	Rattus_norvegicus
ENSONIG00000009910	utp20	100	55.303	ENSRBIG00000025384	UTP20	100	55.375	Rhinopithecus_bieti
ENSONIG00000009910	utp20	100	56.610	ENSRROG00000041254	UTP20	100	56.536	Rhinopithecus_roxellana
ENSONIG00000009910	utp20	78	35.808	YBL004W	-	64	35.808	Saccharomyces_cerevisiae
ENSONIG00000009910	utp20	100	55.591	ENSSBOG00000035762	UTP20	100	55.807	Saimiri_boliviensis_boliviensis
ENSONIG00000009910	utp20	98	55.273	ENSSHAG00000002298	UTP20	93	55.911	Sarcophilus_harrisii
ENSONIG00000009910	utp20	100	65.958	ENSSFOG00015001674	utp20	100	66.596	Scleropages_formosus
ENSONIG00000009910	utp20	98	77.678	ENSSMAG00000016460	utp20	100	77.598	Scophthalmus_maximus
ENSONIG00000009910	utp20	100	83.298	ENSSDUG00000013730	utp20	100	83.298	Seriola_dumerili
ENSONIG00000009910	utp20	100	85.143	ENSSLDG00000012844	utp20	100	85.179	Seriola_lalandi_dorsalis
ENSONIG00000009910	utp20	62	71.296	ENSSARG00000002796	-	63	71.296	Sorex_araneus
ENSONIG00000009910	utp20	99	56.638	ENSSPUG00000004513	UTP20	99	55.929	Sphenodon_punctatus
ENSONIG00000009910	utp20	100	81.850	ENSSPAG00000014674	utp20	100	82.014	Stegastes_partitus
ENSONIG00000009910	utp20	100	56.551	ENSSSCG00000000869	UTP20	100	56.642	Sus_scrofa
ENSONIG00000009910	utp20	99	55.939	ENSTGUG00000009053	-	100	56.938	Taeniopygia_guttata
ENSONIG00000009910	utp20	99	79.044	ENSTRUG00000005849	utp20	99	79.150	Takifugu_rubripes
ENSONIG00000009910	utp20	100	75.805	ENSTNIG00000006921	utp20	100	76.618	Tetraodon_nigroviridis
ENSONIG00000009910	utp20	86	61.404	ENSTBEG00000011917	UTP20	90	52.354	Tupaia_belangeri
ENSONIG00000009910	utp20	99	55.460	ENSTTRG00000017195	UTP20	100	54.675	Tursiops_truncatus
ENSONIG00000009910	utp20	100	56.383	ENSUAMG00000016363	UTP20	100	56.662	Ursus_americanus
ENSONIG00000009910	utp20	100	55.957	ENSUMAG00000000077	UTP20	100	56.166	Ursus_maritimus
ENSONIG00000009910	utp20	89	57.670	ENSVPAG00000011620	UTP20	92	56.265	Vicugna_pacos
ENSONIG00000009910	utp20	100	56.230	ENSVVUG00000018110	UTP20	100	56.357	Vulpes_vulpes
ENSONIG00000009910	utp20	98	56.461	ENSXETG00000032346	UTP20	100	56.577	Xenopus_tropicalis
ENSONIG00000009910	utp20	98	75.812	ENSXMAG00000006503	utp20	100	75.495	Xiphophorus_maculatus