EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000009993 (Gene tree)
Gene ID: 100710591
Gene Symbol: smarca5
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 10502 bases
Position: chrGL831212.1:173782-184283
Accession: 100710591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000012569	ResIII	PF04851.15	4.6e-11	1	1
ENSONIP00000012569	DEAD	PF00270.29	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000012579	-	5633	-	ENSONIP00000012569	1036 (aa)	XP_003449716	I3JUM4

Gene Model

Click here to download ENSONIG00000009993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000009993's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000009993	smarca5	52	43.352	ENSONIG00000003183	chd1l	55	43.455
ENSONIG00000009993	smarca5	56	44.487	ENSONIG00000013166	hells	77	37.087

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000009993	smarca5	95	83.266	ENSG00000102038	SMARCA1	96	81.256	Homo_sapiens
ENSONIG00000009993	smarca5	100	97.780	ENSAPOG00000016035	smarca5	100	97.780	Acanthochromis_polyacanthus
ENSONIG00000009993	smarca5	95	82.371	ENSAMEG00000015218	SMARCA1	96	80.407	Ailuropoda_melanoleuca
ENSONIG00000009993	smarca5	87	99.445	ENSACIG00000016982	smarca5	100	99.445	Amphilophus_citrinellus
ENSONIG00000009993	smarca5	100	97.780	ENSAOCG00000015578	smarca5	100	97.780	Amphiprion_ocellaris
ENSONIG00000009993	smarca5	100	97.780	ENSAPEG00000011117	smarca5	100	97.780	Amphiprion_percula
ENSONIG00000009993	smarca5	100	97.876	ENSATEG00000012894	smarca5	100	97.876	Anabas_testudineus
ENSONIG00000009993	smarca5	94	84.521	ENSAPLG00000013149	SMARCA1	99	84.521	Anas_platyrhynchos
ENSONIG00000009993	smarca5	98	82.600	ENSACAG00000011376	SMARCA1	94	85.031	Anolis_carolinensis
ENSONIG00000009993	smarca5	95	78.427	ENSANAG00000023098	SMARCA1	96	76.546	Aotus_nancymaae
ENSONIG00000009993	smarca5	100	99.807	ENSACLG00000025356	smarca5	100	99.807	Astatotilapia_calliptera
ENSONIG00000009993	smarca5	100	91.338	ENSAMXG00000005709	smarca5	100	91.338	Astyanax_mexicanus
ENSONIG00000009993	smarca5	90	84.962	ENSAMXG00000011227	smarca1	99	86.248	Astyanax_mexicanus
ENSONIG00000009993	smarca5	95	83.486	ENSBTAG00000002292	SMARCA1	95	80.781	Bos_taurus
ENSONIG00000009993	smarca5	96	62.846	WBGene00002169	isw-1	95	63.880	Caenorhabditis_elegans
ENSONIG00000009993	smarca5	94	83.809	ENSCJAG00000002868	SMARCA1	96	81.256	Callithrix_jacchus
ENSONIG00000009993	smarca5	95	73.883	ENSCAFG00000018673	SMARCA1	99	75.294	Canis_familiaris
ENSONIG00000009993	smarca5	95	83.333	ENSCAFG00020001751	SMARCA1	96	81.452	Canis_lupus_dingo
ENSONIG00000009993	smarca5	95	83.181	ENSCHIG00000009837	SMARCA1	97	80.526	Capra_hircus
ENSONIG00000009993	smarca5	98	80.502	ENSTSYG00000004240	SMARCA1	94	84.794	Carlito_syrichta
ENSONIG00000009993	smarca5	95	81.928	ENSCPOG00000013601	SMARCA1	93	82.490	Cavia_porcellus
ENSONIG00000009993	smarca5	95	80.544	ENSCCAG00000030817	SMARCA1	96	78.606	Cebus_capucinus
ENSONIG00000009993	smarca5	93	84.265	ENSCATG00000015921	SMARCA1	94	82.347	Cercocebus_atys
ENSONIG00000009993	smarca5	95	82.560	ENSCLAG00000002171	SMARCA1	97	80.253	Chinchilla_lanigera
ENSONIG00000009993	smarca5	95	83.266	ENSCSAG00000008460	SMARCA1	96	81.256	Chlorocebus_sabaeus
ENSONIG00000009993	smarca5	95	84.397	ENSCPBG00000001146	SMARCA1	93	84.725	Chrysemys_picta_bellii
ENSONIG00000009993	smarca5	96	74.155	ENSCING00000004110	swi/snf	99	74.155	Ciona_intestinalis
ENSONIG00000009993	smarca5	98	72.576	ENSCSAVG00000004620	-	99	75.839	Ciona_savignyi
ENSONIG00000009993	smarca5	95	83.367	ENSCANG00000007183	SMARCA1	96	81.354	Colobus_angolensis_palliatus
ENSONIG00000009993	smarca5	95	82.359	ENSCGRG00001010776	Smarca1	96	80.373	Cricetulus_griseus_chok1gshd
ENSONIG00000009993	smarca5	95	81.763	ENSCGRG00000015301	Smarca1	97	81.790	Cricetulus_griseus_crigri
ENSONIG00000009993	smarca5	100	96.429	ENSCSEG00000000328	smarca5	100	96.429	Cynoglossus_semilaevis
ENSONIG00000009993	smarca5	100	97.104	ENSCVAG00000008668	smarca5	100	97.104	Cyprinodon_variegatus
ENSONIG00000009993	smarca5	100	91.522	ENSDARG00000052348	smarca5	100	91.522	Danio_rerio
ENSONIG00000009993	smarca5	94	83.183	ENSDARG00000012776	smarca1	96	83.183	Danio_rerio
ENSONIG00000009993	smarca5	93	84.298	ENSDNOG00000004315	SMARCA1	94	82.041	Dasypus_novemcinctus
ENSONIG00000009993	smarca5	96	82.111	ENSDORG00000009270	Smarca1	90	84.730	Dipodomys_ordii
ENSONIG00000009993	smarca5	95	74.498	FBgn0011604	Iswi	97	74.300	Drosophila_melanogaster
ENSONIG00000009993	smarca5	78	81.818	ENSETEG00000017426	SMARCA1	83	81.818	Echinops_telfairi
ENSONIG00000009993	smarca5	97	80.933	ENSEBUG00000001239	smarca5	99	80.933	Eptatretus_burgeri
ENSONIG00000009993	smarca5	95	78.715	ENSEASG00005008218	SMARCA1	99	79.757	Equus_asinus_asinus
ENSONIG00000009993	smarca5	95	83.367	ENSECAG00000012106	SMARCA1	97	80.897	Equus_caballus
ENSONIG00000009993	smarca5	76	84.106	ENSEEUG00000014927	SMARCA1	80	84.106	Erinaceus_europaeus
ENSONIG00000009993	smarca5	94	84.529	ENSELUG00000010515	smarca1	95	85.647	Esox_lucius
ENSONIG00000009993	smarca5	95	83.232	ENSFCAG00000018496	SMARCA1	96	81.354	Felis_catus
ENSONIG00000009993	smarca5	88	85.777	ENSFALG00000000209	SMARCA1	98	85.777	Ficedula_albicollis
ENSONIG00000009993	smarca5	93	82.857	ENSFDAG00000009818	SMARCA1	94	83.351	Fukomys_damarensis
ENSONIG00000009993	smarca5	100	95.511	ENSFHEG00000007687	smarca5	100	95.511	Fundulus_heteroclitus
ENSONIG00000009993	smarca5	96	82.423	ENSGALG00000008431	SMARCA1	95	85.432	Gallus_gallus
ENSONIG00000009993	smarca5	100	97.490	ENSGAFG00000017731	smarca5	100	97.490	Gambusia_affinis
ENSONIG00000009993	smarca5	94	84.979	ENSGAGG00000023575	SMARCA1	99	84.979	Gopherus_agassizii
ENSONIG00000009993	smarca5	70	96.000	ENSGGOG00000012841	-	92	80.146	Gorilla_gorilla
ENSONIG00000009993	smarca5	95	82.460	ENSHGLG00000003080	SMARCA1	96	80.471	Heterocephalus_glaber_female
ENSONIG00000009993	smarca5	95	81.827	ENSHGLG00100001102	SMARCA1	99	82.389	Heterocephalus_glaber_male
ENSONIG00000009993	smarca5	100	96.625	ENSHCOG00000005458	smarca5	100	96.625	Hippocampus_comes
ENSONIG00000009993	smarca5	96	82.522	ENSIPUG00000016905	Smarca1	99	84.216	Ictalurus_punctatus
ENSONIG00000009993	smarca5	100	91.032	ENSIPUG00000005229	SMARCA5	99	93.313	Ictalurus_punctatus
ENSONIG00000009993	smarca5	95	83.131	ENSSTOG00000014524	SMARCA1	97	81.710	Ictidomys_tridecemlineatus
ENSONIG00000009993	smarca5	95	81.846	ENSJJAG00000002593	Smarca1	98	78.736	Jaculus_jaculus
ENSONIG00000009993	smarca5	100	96.911	ENSKMAG00000003777	smarca5	100	96.911	Kryptolebias_marmoratus
ENSONIG00000009993	smarca5	94	95.399	ENSLBEG00000013295	SMARCA1	100	97.089	Labrus_bergylta
ENSONIG00000009993	smarca5	100	95.560	ENSLBEG00000018112	smarca5	100	95.560	Labrus_bergylta
ENSONIG00000009993	smarca5	94	85.670	ENSLACG00000016697	SMARCA1	95	85.670	Latimeria_chalumnae
ENSONIG00000009993	smarca5	94	85.714	ENSLOCG00000014591	smarca1	95	85.714	Lepisosteus_oculatus
ENSONIG00000009993	smarca5	96	81.393	ENSLAFG00000000896	SMARCA1	98	82.490	Loxodonta_africana
ENSONIG00000009993	smarca5	95	83.266	ENSMFAG00000002117	SMARCA1	94	84.868	Macaca_fascicularis
ENSONIG00000009993	smarca5	93	84.265	ENSMMUG00000008818	SMARCA1	97	85.091	Macaca_mulatta
ENSONIG00000009993	smarca5	93	84.265	ENSMNEG00000041768	SMARCA1	94	84.868	Macaca_nemestrina
ENSONIG00000009993	smarca5	95	83.266	ENSMLEG00000043198	SMARCA1	96	81.256	Mandrillus_leucophaeus
ENSONIG00000009993	smarca5	100	97.594	ENSMAMG00000014294	smarca5	100	97.594	Mastacembelus_armatus
ENSONIG00000009993	smarca5	100	99.807	ENSMZEG00005009369	smarca5	100	99.807	Maylandia_zebra
ENSONIG00000009993	smarca5	94	83.400	ENSMGAG00000007042	SMARCA1	98	83.400	Meleagris_gallopavo
ENSONIG00000009993	smarca5	93	82.837	ENSMAUG00000008133	Smarca1	94	80.812	Mesocricetus_auratus
ENSONIG00000009993	smarca5	95	83.669	ENSMICG00000015768	SMARCA1	93	84.114	Microcebus_murinus
ENSONIG00000009993	smarca5	95	81.645	ENSMOCG00000009464	Smarca1	96	79.590	Microtus_ochrogaster
ENSONIG00000009993	smarca5	96	96.479	ENSMMOG00000005547	smarca5	100	96.479	Mola_mola
ENSONIG00000009993	smarca5	99	81.712	ENSMODG00000013187	-	94	84.615	Monodelphis_domestica
ENSONIG00000009993	smarca5	100	97.396	ENSMALG00000002081	smarca5	100	97.396	Monopterus_albus
ENSONIG00000009993	smarca5	95	81.946	MGP_CAROLIEiJ_G0033034	Smarca1	96	80.078	Mus_caroli
ENSONIG00000009993	smarca5	95	82.046	ENSMUSG00000031099	Smarca1	96	80.176	Mus_musculus
ENSONIG00000009993	smarca5	95	82.222	MGP_PahariEiJ_G0031579	Smarca1	96	80.334	Mus_pahari
ENSONIG00000009993	smarca5	95	82.046	MGP_SPRETEiJ_G0034192	Smarca1	96	80.176	Mus_spretus
ENSONIG00000009993	smarca5	95	82.335	ENSMPUG00000017423	SMARCA1	91	80.504	Mustela_putorius_furo
ENSONIG00000009993	smarca5	95	81.213	ENSMLUG00000029614	SMARCA1	93	81.325	Myotis_lucifugus
ENSONIG00000009993	smarca5	93	83.350	ENSNGAG00000006492	Smarca1	94	81.421	Nannospalax_galili
ENSONIG00000009993	smarca5	96	99.899	ENSNBRG00000004463	smarca5	100	99.899	Neolamprologus_brichardi
ENSONIG00000009993	smarca5	95	81.574	ENSNLEG00000015179	SMARCA1	94	84.144	Nomascus_leucogenys
ENSONIG00000009993	smarca5	88	76.749	ENSMEUG00000008819	SMARCA1	97	76.749	Notamacropus_eugenii
ENSONIG00000009993	smarca5	97	80.315	ENSODEG00000012163	SMARCA1	91	83.141	Octodon_degus
ENSONIG00000009993	smarca5	94	85.391	ENSOANG00000002862	SMARCA1	99	85.391	Ornithorhynchus_anatinus
ENSONIG00000009993	smarca5	95	83.485	ENSOCUG00000001047	SMARCA1	96	81.452	Oryctolagus_cuniculus
ENSONIG00000009993	smarca5	100	96.154	ENSORLG00000021998	smarca5	100	96.154	Oryzias_latipes
ENSONIG00000009993	smarca5	100	96.246	ENSORLG00020017679	smarca5	100	96.246	Oryzias_latipes_hni
ENSONIG00000009993	smarca5	100	96.532	ENSORLG00015017210	smarca5	100	96.532	Oryzias_latipes_hsok
ENSONIG00000009993	smarca5	100	96.721	ENSOMEG00000000086	smarca5	100	96.721	Oryzias_melastigma
ENSONIG00000009993	smarca5	93	83.778	ENSOGAG00000004399	SMARCA1	94	81.653	Otolemur_garnettii
ENSONIG00000009993	smarca5	94	83.742	ENSOARG00000014638	SMARCA1	99	83.742	Ovis_aries
ENSONIG00000009993	smarca5	95	83.266	ENSPPAG00000034647	SMARCA1	96	81.256	Pan_paniscus
ENSONIG00000009993	smarca5	95	83.333	ENSPPRG00000008929	SMARCA1	96	81.452	Panthera_pardus
ENSONIG00000009993	smarca5	95	81.566	ENSPTIG00000000915	SMARCA1	96	81.982	Panthera_tigris_altaica
ENSONIG00000009993	smarca5	95	83.266	ENSPTRG00000049876	SMARCA1	94	82.347	Pan_troglodytes
ENSONIG00000009993	smarca5	95	83.266	ENSPANG00000003871	SMARCA1	96	81.256	Papio_anubis
ENSONIG00000009993	smarca5	95	81.452	ENSPKIG00000013411	smarca1	99	81.332	Paramormyrops_kingsleyae
ENSONIG00000009993	smarca5	94	84.979	ENSPSIG00000010101	SMARCA1	99	84.979	Pelodiscus_sinensis
ENSONIG00000009993	smarca5	93	83.145	ENSPEMG00000017503	Smarca1	94	81.117	Peromyscus_maniculatus_bairdii
ENSONIG00000009993	smarca5	94	85.041	ENSPCIG00000015460	SMARCA1	96	85.041	Phascolarctos_cinereus
ENSONIG00000009993	smarca5	100	97.394	ENSPFOG00000007649	smarca5	100	97.394	Poecilia_formosa
ENSONIG00000009993	smarca5	100	97.394	ENSPLAG00000003363	smarca5	100	97.394	Poecilia_latipinna
ENSONIG00000009993	smarca5	100	97.490	ENSPMEG00000019849	smarca5	100	97.490	Poecilia_mexicana
ENSONIG00000009993	smarca5	100	97.394	ENSPREG00000023250	smarca5	100	97.394	Poecilia_reticulata
ENSONIG00000009993	smarca5	95	80.303	ENSPPYG00000020703	SMARCA1	96	78.508	Pongo_abelii
ENSONIG00000009993	smarca5	75	78.125	ENSPCOG00000020722	SMARCA1	93	80.712	Propithecus_coquereli
ENSONIG00000009993	smarca5	87	83.871	ENSPVAG00000003805	SMARCA1	88	83.968	Pteropus_vampyrus
ENSONIG00000009993	smarca5	58	100.000	ENSPNYG00000012299	smarca5	93	100.000	Pundamilia_nyererei
ENSONIG00000009993	smarca5	95	82.157	ENSRNOG00000003762	Smarca1	96	80.275	Rattus_norvegicus
ENSONIG00000009993	smarca5	95	83.367	ENSRROG00000034167	SMARCA1	96	81.354	Rhinopithecus_roxellana
ENSONIG00000009993	smarca5	94	83.947	ENSSBOG00000020641	SMARCA1	99	83.947	Saimiri_boliviensis_boliviensis
ENSONIG00000009993	smarca5	94	79.938	ENSSHAG00000013518	SMARCA1	99	79.938	Sarcophilus_harrisii
ENSONIG00000009993	smarca5	97	91.417	ENSSFOG00015016794	smarca5	100	93.402	Scleropages_formosus
ENSONIG00000009993	smarca5	95	84.125	ENSSFOG00015009043	smarca1	96	84.623	Scleropages_formosus
ENSONIG00000009993	smarca5	100	96.146	ENSSMAG00000004801	smarca5	100	96.146	Scophthalmus_maximus
ENSONIG00000009993	smarca5	100	97.394	ENSSDUG00000020690	smarca5	100	97.394	Seriola_dumerili
ENSONIG00000009993	smarca5	100	97.394	ENSSLDG00000025190	smarca5	100	97.394	Seriola_lalandi_dorsalis
ENSONIG00000009993	smarca5	78	84.698	ENSSARG00000000842	SMARCA1	81	84.698	Sorex_araneus
ENSONIG00000009993	smarca5	95	83.789	ENSSPUG00000000590	SMARCA1	98	82.510	Sphenodon_punctatus
ENSONIG00000009993	smarca5	100	97.780	ENSSPAG00000002894	smarca5	100	97.780	Stegastes_partitus
ENSONIG00000009993	smarca5	93	84.161	ENSSSCG00000012649	SMARCA1	96	82.430	Sus_scrofa
ENSONIG00000009993	smarca5	94	84.216	ENSTGUG00000003899	-	99	84.216	Taeniopygia_guttata
ENSONIG00000009993	smarca5	100	96.236	ENSTRUG00000014094	smarca5	100	96.236	Takifugu_rubripes
ENSONIG00000009993	smarca5	98	95.379	ENSTNIG00000017717	smarca5	97	95.674	Tetraodon_nigroviridis
ENSONIG00000009993	smarca5	86	82.927	ENSTBEG00000014973	SMARCA1	89	82.976	Tupaia_belangeri
ENSONIG00000009993	smarca5	93	79.980	ENSTTRG00000006168	SMARCA1	96	80.757	Tursiops_truncatus
ENSONIG00000009993	smarca5	95	83.165	ENSUAMG00000020201	SMARCA1	96	81.158	Ursus_americanus
ENSONIG00000009993	smarca5	95	79.234	ENSUMAG00000004073	SMARCA1	96	84.841	Ursus_maritimus
ENSONIG00000009993	smarca5	73	87.171	ENSVPAG00000010492	-	77	87.543	Vicugna_pacos
ENSONIG00000009993	smarca5	95	83.468	ENSVVUG00000008878	SMARCA1	98	85.410	Vulpes_vulpes
ENSONIG00000009993	smarca5	95	84.232	ENSXETG00000001526	smarca1	98	84.560	Xenopus_tropicalis
ENSONIG00000009993	smarca5	97	97.621	ENSXCOG00000011170	smarca5	100	97.621	Xiphophorus_couchianus
ENSONIG00000009993	smarca5	100	97.201	ENSXMAG00000009678	smarca5	100	97.201	Xiphophorus_maculatus