EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000009994 (Gene tree)
Gene ID: -
Gene Symbol: swt1
Alias: -
Full Name: SWT1 RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 26045 bases
Position: chrGL831168.1:3727591-3753635
Accession: ZDB-GENE-041015-373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000012571	PIN_4	PF13638.6	7.7e-30	1	1
ENSONIP00000012570	PIN_4	PF13638.6	4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000012580	-	2812	-	ENSONIP00000012570	853 (aa)	-	I3JUM5
ENSONIT00000012581	-	1683	-	ENSONIP00000012571	527 (aa)	-	I3JUM6

Gene Model

Click here to download ENSONIG00000009994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000009994's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000009994	swt1	99	35.821	ENSG00000116668	SWT1	59	35.634	Homo_sapiens
ENSONIG00000009994	swt1	98	69.529	ENSAPOG00000014897	-	86	69.529	Acanthochromis_polyacanthus
ENSONIG00000009994	swt1	99	35.125	ENSAMEG00000013585	SWT1	67	32.782	Ailuropoda_melanoleuca
ENSONIG00000009994	swt1	98	68.571	ENSAOCG00000013932	swt1	86	68.571	Amphiprion_ocellaris
ENSONIG00000009994	swt1	98	68.739	ENSAPEG00000009613	-	86	68.739	Amphiprion_percula
ENSONIG00000009994	swt1	98	65.657	ENSATEG00000018946	swt1	86	64.966	Anabas_testudineus
ENSONIG00000009994	swt1	97	39.015	ENSAPLG00000008607	SWT1	75	36.711	Anas_platyrhynchos
ENSONIG00000009994	swt1	97	34.566	ENSACAG00000002276	SWT1	62	34.687	Anolis_carolinensis
ENSONIG00000009994	swt1	99	35.926	ENSANAG00000027068	SWT1	59	35.741	Aotus_nancymaae
ENSONIG00000009994	swt1	96	88.015	ENSACLG00000009742	swt1	100	88.015	Astatotilapia_calliptera
ENSONIG00000009994	swt1	99	45.756	ENSAMXG00000010971	swt1	58	46.523	Astyanax_mexicanus
ENSONIG00000009994	swt1	58	39.877	ENSBTAG00000004492	SWT1	52	39.877	Bos_taurus
ENSONIG00000009994	swt1	99	34.559	ENSCJAG00000005544	SWT1	59	34.559	Callithrix_jacchus
ENSONIG00000009994	swt1	99	34.783	ENSCAFG00000013543	SWT1	62	34.926	Canis_familiaris
ENSONIG00000009994	swt1	99	34.783	ENSCAFG00020015648	SWT1	63	34.926	Canis_lupus_dingo
ENSONIG00000009994	swt1	99	34.901	ENSCHIG00000023511	SWT1	93	31.894	Capra_hircus
ENSONIG00000009994	swt1	99	36.655	ENSTSYG00000010470	SWT1	59	36.331	Carlito_syrichta
ENSONIG00000009994	swt1	94	34.451	ENSCPOG00000014251	SWT1	64	34.875	Cavia_porcellus
ENSONIG00000009994	swt1	99	35.926	ENSCCAG00000033926	SWT1	59	35.926	Cebus_capucinus
ENSONIG00000009994	swt1	99	35.926	ENSCATG00000042210	SWT1	91	35.741	Cercocebus_atys
ENSONIG00000009994	swt1	99	35.283	ENSCLAG00000013959	SWT1	61	35.466	Chinchilla_lanigera
ENSONIG00000009994	swt1	99	35.370	ENSCSAG00000012895	SWT1	59	35.185	Chlorocebus_sabaeus
ENSONIG00000009994	swt1	97	37.361	ENSCPBG00000015691	SWT1	62	35.852	Chrysemys_picta_bellii
ENSONIG00000009994	swt1	99	35.568	ENSCANG00000032207	SWT1	91	35.382	Colobus_angolensis_palliatus
ENSONIG00000009994	swt1	100	35.401	ENSCGRG00001022955	Swt1	63	35.401	Cricetulus_griseus_chok1gshd
ENSONIG00000009994	swt1	100	35.401	ENSCGRG00000010224	Swt1	61	34.718	Cricetulus_griseus_crigri
ENSONIG00000009994	swt1	97	55.282	ENSCSEG00000017352	swt1	75	60.034	Cynoglossus_semilaevis
ENSONIG00000009994	swt1	99	46.886	ENSDARG00000094010	swt1	60	45.972	Danio_rerio
ENSONIG00000009994	swt1	84	36.943	ENSDNOG00000005254	SWT1	56	36.943	Dasypus_novemcinctus
ENSONIG00000009994	swt1	99	36.162	ENSDORG00000010531	Swt1	64	35.832	Dipodomys_ordii
ENSONIG00000009994	swt1	99	34.964	ENSEASG00005005530	SWT1	63	34.964	Equus_asinus_asinus
ENSONIG00000009994	swt1	99	32.486	ENSECAG00000012085	SWT1	62	32.486	Equus_caballus
ENSONIG00000009994	swt1	97	48.837	ENSELUG00000020565	swt1	57	49.918	Esox_lucius
ENSONIG00000009994	swt1	99	33.877	ENSFCAG00000011286	SWT1	59	34.375	Felis_catus
ENSONIG00000009994	swt1	98	36.397	ENSFALG00000003206	SWT1	61	34.596	Ficedula_albicollis
ENSONIG00000009994	swt1	99	35.229	ENSFDAG00000007569	SWT1	60	35.229	Fukomys_damarensis
ENSONIG00000009994	swt1	97	37.823	ENSGALG00000034230	SWT1	62	37.248	Gallus_gallus
ENSONIG00000009994	swt1	96	57.371	ENSGAFG00000007803	-	78	60.333	Gambusia_affinis
ENSONIG00000009994	swt1	95	37.523	ENSGAGG00000025050	SWT1	96	36.453	Gopherus_agassizii
ENSONIG00000009994	swt1	94	34.503	ENSGGOG00000041167	-	95	31.803	Gorilla_gorilla
ENSONIG00000009994	swt1	100	88.140	ENSHBUG00000006188	swt1	100	88.140	Haplochromis_burtoni
ENSONIG00000009994	swt1	99	34.743	ENSHGLG00000006542	SWT1	64	33.836	Heterocephalus_glaber_female
ENSONIG00000009994	swt1	99	34.743	ENSHGLG00100014408	SWT1	62	33.836	Heterocephalus_glaber_male
ENSONIG00000009994	swt1	67	43.169	ENSHCOG00000016930	-	86	38.107	Hippocampus_comes
ENSONIG00000009994	swt1	97	45.865	ENSIPUG00000009113	-	58	46.723	Ictalurus_punctatus
ENSONIG00000009994	swt1	100	33.392	ENSSTOG00000010356	SWT1	61	33.166	Ictidomys_tridecemlineatus
ENSONIG00000009994	swt1	99	35.912	ENSJJAG00000015927	Swt1	62	35.912	Jaculus_jaculus
ENSONIG00000009994	swt1	100	64.874	ENSKMAG00000012533	swt1	83	64.034	Kryptolebias_marmoratus
ENSONIG00000009994	swt1	95	63.855	ENSLBEG00000020663	-	84	63.855	Labrus_bergylta
ENSONIG00000009994	swt1	97	37.848	ENSLACG00000009194	SWT1	79	35.489	Latimeria_chalumnae
ENSONIG00000009994	swt1	97	46.080	ENSLOCG00000001749	swt1	97	46.080	Lepisosteus_oculatus
ENSONIG00000009994	swt1	99	33.455	ENSLAFG00000004346	-	93	32.387	Loxodonta_africana
ENSONIG00000009994	swt1	100	35.413	ENSMFAG00000031793	SWT1	92	35.370	Macaca_fascicularis
ENSONIG00000009994	swt1	99	34.766	ENSMMUG00000013882	SWT1	91	34.579	Macaca_mulatta
ENSONIG00000009994	swt1	99	35.556	ENSMNEG00000035502	SWT1	92	35.370	Macaca_nemestrina
ENSONIG00000009994	swt1	100	35.596	ENSMLEG00000038692	SWT1	91	35.556	Mandrillus_leucophaeus
ENSONIG00000009994	swt1	100	88.140	ENSMZEG00005018489	swt1	100	88.140	Maylandia_zebra
ENSONIG00000009994	swt1	97	36.282	ENSMGAG00000000973	SWT1	93	36.589	Meleagris_gallopavo
ENSONIG00000009994	swt1	70	40.206	ENSMAUG00000007996	Swt1	57	32.702	Mesocricetus_auratus
ENSONIG00000009994	swt1	97	36.106	ENSMICG00000014975	SWT1	58	36.090	Microcebus_murinus
ENSONIG00000009994	swt1	100	36.430	ENSMOCG00000009776	Swt1	59	36.066	Microtus_ochrogaster
ENSONIG00000009994	swt1	100	33.986	ENSMODG00000007472	SWT1	59	33.628	Monodelphis_domestica
ENSONIG00000009994	swt1	98	65.025	ENSMALG00000019308	swt1	85	64.177	Monopterus_albus
ENSONIG00000009994	swt1	100	36.976	MGP_CAROLIEiJ_G0014692	Swt1	70	42.938	Mus_caroli
ENSONIG00000009994	swt1	100	36.757	ENSMUSG00000052748	Swt1	70	42.938	Mus_musculus
ENSONIG00000009994	swt1	100	36.462	MGP_PahariEiJ_G0027928	Swt1	70	42.373	Mus_pahari
ENSONIG00000009994	swt1	100	36.577	MGP_SPRETEiJ_G0015499	Swt1	70	42.373	Mus_spretus
ENSONIG00000009994	swt1	99	35.027	ENSMPUG00000011913	SWT1	59	35.027	Mustela_putorius_furo
ENSONIG00000009994	swt1	100	34.353	ENSMLUG00000001142	SWT1	64	32.081	Myotis_lucifugus
ENSONIG00000009994	swt1	97	35.849	ENSNGAG00000021080	Swt1	59	35.714	Nannospalax_galili
ENSONIG00000009994	swt1	99	35.448	ENSNLEG00000018031	SWT1	59	35.448	Nomascus_leucogenys
ENSONIG00000009994	swt1	99	32.740	ENSOANG00000001013	-	70	32.670	Ornithorhynchus_anatinus
ENSONIG00000009994	swt1	100	35.816	ENSOCUG00000004901	SWT1	61	35.842	Oryctolagus_cuniculus
ENSONIG00000009994	swt1	96	60.702	ENSORLG00000009682	swt1	87	60.702	Oryzias_latipes
ENSONIG00000009994	swt1	98	60.870	ENSORLG00020011654	swt1	82	60.870	Oryzias_latipes_hni
ENSONIG00000009994	swt1	96	60.201	ENSORLG00015007734	swt1	88	60.201	Oryzias_latipes_hsok
ENSONIG00000009994	swt1	98	55.615	ENSOMEG00000006607	swt1	80	59.832	Oryzias_melastigma
ENSONIG00000009994	swt1	99	35.727	ENSOGAG00000016195	SWT1	59	35.543	Otolemur_garnettii
ENSONIG00000009994	swt1	99	34.720	ENSOARG00000004156	SWT1	63	31.905	Ovis_aries
ENSONIG00000009994	swt1	99	35.940	ENSPPAG00000021400	SWT1	59	35.754	Pan_paniscus
ENSONIG00000009994	swt1	99	34.239	ENSPPRG00000023754	SWT1	59	34.239	Panthera_pardus
ENSONIG00000009994	swt1	99	34.239	ENSPTIG00000021889	SWT1	59	34.239	Panthera_tigris_altaica
ENSONIG00000009994	swt1	99	35.940	ENSPTRG00000001777	SWT1	59	35.754	Pan_troglodytes
ENSONIG00000009994	swt1	99	35.741	ENSPANG00000005099	SWT1	91	35.556	Papio_anubis
ENSONIG00000009994	swt1	96	46.455	ENSPKIG00000005979	swt1	58	45.882	Paramormyrops_kingsleyae
ENSONIG00000009994	swt1	97	36.685	ENSPSIG00000008961	SWT1	61	35.897	Pelodiscus_sinensis
ENSONIG00000009994	swt1	100	36.496	ENSPEMG00000008208	Swt1	59	36.775	Peromyscus_maniculatus_bairdii
ENSONIG00000009994	swt1	100	34.974	ENSPCIG00000002443	SWT1	72	31.831	Phascolarctos_cinereus
ENSONIG00000009994	swt1	94	63.123	ENSPFOG00000010988	-	98	52.921	Poecilia_formosa
ENSONIG00000009994	swt1	94	63.289	ENSPLAG00000022908	-	80	62.126	Poecilia_latipinna
ENSONIG00000009994	swt1	94	63.123	ENSPMEG00000006943	-	80	61.960	Poecilia_mexicana
ENSONIG00000009994	swt1	58	63.121	ENSPREG00000014723	-	66	63.121	Poecilia_reticulata
ENSONIG00000009994	swt1	99	35.382	ENSPPYG00000000415	SWT1	59	35.196	Pongo_abelii
ENSONIG00000009994	swt1	100	32.734	ENSPVAG00000005968	SWT1	60	32.664	Pteropus_vampyrus
ENSONIG00000009994	swt1	100	88.140	ENSPNYG00000012934	swt1	100	88.140	Pundamilia_nyererei
ENSONIG00000009994	swt1	97	47.955	ENSPNAG00000017795	swt1	57	47.466	Pygocentrus_nattereri
ENSONIG00000009994	swt1	100	36.182	ENSRNOG00000032258	Swt1	62	35.676	Rattus_norvegicus
ENSONIG00000009994	swt1	99	35.196	ENSRBIG00000040630	SWT1	91	35.009	Rhinopithecus_bieti
ENSONIG00000009994	swt1	59	42.991	ENSRROG00000028596	SWT1	51	42.991	Rhinopithecus_roxellana
ENSONIG00000009994	swt1	99	35.926	ENSSBOG00000028825	SWT1	59	35.955	Saimiri_boliviensis_boliviensis
ENSONIG00000009994	swt1	100	34.629	ENSSHAG00000009241	SWT1	60	34.884	Sarcophilus_harrisii
ENSONIG00000009994	swt1	97	47.037	ENSSFOG00015004895	swt1	56	47.500	Scleropages_formosus
ENSONIG00000009994	swt1	97	57.762	ENSSMAG00000020761	-	62	63.543	Scophthalmus_maximus
ENSONIG00000009994	swt1	98	68.174	ENSSDUG00000012345	swt1	85	68.174	Seriola_dumerili
ENSONIG00000009994	swt1	98	68.342	ENSSLDG00000003821	swt1	85	68.342	Seriola_lalandi_dorsalis
ENSONIG00000009994	swt1	99	35.805	ENSSPUG00000003899	SWT1	67	33.529	Sphenodon_punctatus
ENSONIG00000009994	swt1	95	69.295	ENSSPAG00000001030	swt1	85	69.295	Stegastes_partitus
ENSONIG00000009994	swt1	100	35.009	ENSSSCG00000015569	SWT1	63	33.940	Sus_scrofa
ENSONIG00000009994	swt1	96	37.127	ENSTGUG00000003718	-	98	36.013	Taeniopygia_guttata
ENSONIG00000009994	swt1	97	57.407	ENSTRUG00000006420	swt1	63	56.444	Takifugu_rubripes
ENSONIG00000009994	swt1	61	56.932	ENSTNIG00000018118	-	96	59.392	Tetraodon_nigroviridis
ENSONIG00000009994	swt1	99	33.394	ENSTTRG00000005914	SWT1	60	33.278	Tursiops_truncatus
ENSONIG00000009994	swt1	99	35.189	ENSUAMG00000020937	SWT1	72	33.233	Ursus_americanus
ENSONIG00000009994	swt1	99	35.189	ENSUMAG00000021918	SWT1	68	33.126	Ursus_maritimus
ENSONIG00000009994	swt1	85	35.802	ENSVPAG00000011855	SWT1	59	32.589	Vicugna_pacos
ENSONIG00000009994	swt1	99	34.783	ENSVVUG00000009182	SWT1	61	35.110	Vulpes_vulpes
ENSONIG00000009994	swt1	94	62.604	ENSXMAG00000023472	-	78	61.231	Xiphophorus_maculatus