EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000010169 (Gene tree)
Gene ID: 100695619
Gene Symbol: cirbpa
Alias: -
Full Name: cold inducible RNA binding protein a
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 932 bases
Position: chrGL831134.1:9074812-9075743
Accession: ZDB-GENE-050417-329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000012789	RRM_1	PF00076.22	1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000012799	-	531	-	ENSONIP00000012789	176 (aa)	-	I3JV94

Gene Model

Click here to download ENSONIG00000010169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000010169's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000010169	cirbpa	66	38.889	ENSONIG00000003197	-	68	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000010169	cirbpa	70	87.218	ENSAPOG00000004458	cirbpa	100	70.833	Acanthochromis_polyacanthus
ENSONIG00000010169	cirbpa	100	98.864	ENSACIG00000016116	cirbpa	100	98.864	Amphilophus_citrinellus
ENSONIG00000010169	cirbpa	100	71.658	ENSAOCG00000016212	cirbpa	100	74.731	Amphiprion_ocellaris
ENSONIG00000010169	cirbpa	100	69.149	ENSAPEG00000011989	cirbpa	99	73.770	Amphiprion_percula
ENSONIG00000010169	cirbpa	100	80.000	ENSATEG00000014985	cirbpa	99	85.635	Anabas_testudineus
ENSONIG00000010169	cirbpa	100	98.295	ENSACLG00000002094	-	100	98.295	Astatotilapia_calliptera
ENSONIG00000010169	cirbpa	100	55.825	ENSAMXG00000015612	cirbpb	82	59.887	Astyanax_mexicanus
ENSONIG00000010169	cirbpa	100	62.944	ENSCSEG00000014344	cirbpa	100	62.437	Cynoglossus_semilaevis
ENSONIG00000010169	cirbpa	100	75.401	ENSCVAG00000004853	cirbpa	99	79.781	Cyprinodon_variegatus
ENSONIG00000010169	cirbpa	89	59.524	ENSDARG00000013351	cirbpb	92	57.692	Danio_rerio
ENSONIG00000010169	cirbpa	99	78.771	ENSFHEG00000002580	cirbpa	100	84.181	Fundulus_heteroclitus
ENSONIG00000010169	cirbpa	98	50.746	ENSGMOG00000007179	cirbpb	98	49.746	Gadus_morhua
ENSONIG00000010169	cirbpa	99	76.344	ENSGAFG00000008654	cirbpa	100	75.936	Gambusia_affinis
ENSONIG00000010169	cirbpa	100	62.176	ENSGACG00000015206	cirbpa	100	60.825	Gasterosteus_aculeatus
ENSONIG00000010169	cirbpa	98	96.089	ENSHBUG00000022060	cirbpa	99	96.089	Haplochromis_burtoni
ENSONIG00000010169	cirbpa	98	82.184	ENSKMAG00000005905	cirbpa	99	81.714	Kryptolebias_marmoratus
ENSONIG00000010169	cirbpa	100	65.909	ENSLBEG00000000292	cirbpa	100	65.909	Labrus_bergylta
ENSONIG00000010169	cirbpa	61	79.817	ENSLBEG00000027731	-	66	83.951	Labrus_bergylta
ENSONIG00000010169	cirbpa	100	82.065	ENSMAMG00000010168	cirbpa	100	84.783	Mastacembelus_armatus
ENSONIG00000010169	cirbpa	98	96.089	ENSMZEG00005025577	-	99	96.089	Maylandia_zebra
ENSONIG00000010169	cirbpa	98	85.556	ENSMALG00000020092	cirbpa	99	83.333	Monopterus_albus
ENSONIG00000010169	cirbpa	98	96.089	ENSNBRG00000019658	cirbpa	99	96.089	Neolamprologus_brichardi
ENSONIG00000010169	cirbpa	100	82.584	ENSORLG00000015433	cirbpa	100	88.202	Oryzias_latipes
ENSONIG00000010169	cirbpa	100	82.584	ENSORLG00020016909	cirbpa	100	88.202	Oryzias_latipes_hni
ENSONIG00000010169	cirbpa	100	82.584	ENSORLG00015016636	cirbpa	100	88.202	Oryzias_latipes_hsok
ENSONIG00000010169	cirbpa	100	85.311	ENSOMEG00000021469	cirbpa	72	90.751	Oryzias_melastigma
ENSONIG00000010169	cirbpa	99	73.656	ENSPMGG00000017342	cirbpa	95	70.968	Periophthalmus_magnuspinnatus
ENSONIG00000010169	cirbpa	100	78.307	ENSPFOG00000015653	cirbpa	100	80.000	Poecilia_formosa
ENSONIG00000010169	cirbpa	99	79.144	ENSPLAG00000011125	cirbpa	100	80.000	Poecilia_latipinna
ENSONIG00000010169	cirbpa	100	78.723	ENSPMEG00000013878	cirbpa	100	80.000	Poecilia_mexicana
ENSONIG00000010169	cirbpa	99	85.326	ENSPREG00000018042	cirbpa	98	82.609	Poecilia_reticulata
ENSONIG00000010169	cirbpa	100	89.071	ENSPNYG00000007198	-	100	90.710	Pundamilia_nyererei
ENSONIG00000010169	cirbpa	100	57.635	ENSPNAG00000019997	cirbpb	100	56.650	Pygocentrus_nattereri
ENSONIG00000010169	cirbpa	100	55.851	ENSSFOG00015005346	cirbpb	100	60.106	Scleropages_formosus
ENSONIG00000010169	cirbpa	100	65.500	ENSSMAG00000002412	cirbpa	100	61.194	Scophthalmus_maximus
ENSONIG00000010169	cirbpa	100	76.136	ENSSDUG00000016099	cirbpa	100	69.613	Seriola_dumerili
ENSONIG00000010169	cirbpa	100	77.528	ENSSPAG00000023037	cirbpa	99	68.182	Stegastes_partitus
ENSONIG00000010169	cirbpa	100	76.136	ENSTRUG00000010187	cirbpa	99	77.326	Takifugu_rubripes
ENSONIG00000010169	cirbpa	100	73.770	ENSTNIG00000000450	cirbpa	100	75.956	Tetraodon_nigroviridis
ENSONIG00000010169	cirbpa	99	85.326	ENSXCOG00000008262	cirbpa	92	95.890	Xiphophorus_couchianus
ENSONIG00000010169	cirbpa	100	83.784	ENSXMAG00000019336	cirbpa	100	81.081	Xiphophorus_maculatus