EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000010370 (Gene tree)
Gene ID: 100704767
Gene Symbol: zgc:110045
Alias: -
Full Name: zgc:110045
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 7372 bases
Position: chrGL831145.1:7394857-7402228
Accession: ZDB-GENE-050706-149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000013034	KH_1	PF00013.29	2.3e-54	1	3
ENSONIP00000013034	KH_1	PF00013.29	2.3e-54	2	3
ENSONIP00000013034	KH_1	PF00013.29	2.3e-54	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000013044	-	1233	-	ENSONIP00000013034	410 (aa)	-	I3JVY9

Gene Model

Click here to download ENSONIG00000010370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000010370's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000010370	zgc:110045	75	70.886	ENSONIG00000005135	PCBP2	95	70.886
ENSONIG00000010370	zgc:110045	62	43.243	ENSONIG00000007565	hnrpkl	59	43.243
ENSONIG00000010370	zgc:110045	60	41.333	ENSONIG00000015002	hnrnpk	55	41.333
ENSONIG00000010370	zgc:110045	76	75.641	ENSONIG00000004611	-	96	75.641
ENSONIG00000010370	zgc:110045	72	36.986	ENSONIG00000002861	fubp3	68	36.986
ENSONIG00000010370	zgc:110045	89	42.188	ENSONIG00000015810	nova1	87	35.821
ENSONIG00000010370	zgc:110045	99	58.118	ENSONIG00000017378	-	99	58.824
ENSONIG00000010370	zgc:110045	76	66.382	ENSONIG00000012122	-	97	66.382
ENSONIG00000010370	zgc:110045	57	38.202	ENSONIG00000018381	fubp1	56	38.356
ENSONIG00000010370	zgc:110045	100	61.163	ENSONIG00000018552	pcbp4	99	60.698
ENSONIG00000010370	zgc:110045	74	35.971	ENSONIG00000009029	igf2bp2b	68	35.971
ENSONIG00000010370	zgc:110045	55	39.394	ENSONIG00000017713	khsrp	54	39.394
ENSONIG00000010370	zgc:110045	75	71.429	ENSONIG00000017003	pcbp2	95	71.429
ENSONIG00000010370	zgc:110045	58	35.294	ENSONIG00000002163	KHSRP	62	32.979
ENSONIG00000010370	zgc:110045	77	31.013	ENSONIG00000006205	igf2bp1	60	30.625
ENSONIG00000010370	zgc:110045	78	32.911	ENSONIG00000004506	igf2bp3	62	32.911

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000010370	zgc:110045	76	77.316	ENSG00000183570	PCBP3	97	69.714	Homo_sapiens
ENSONIG00000010370	zgc:110045	77	99.051	ENSAPOG00000023735	zgc:110045	97	99.051	Acanthochromis_polyacanthus
ENSONIG00000010370	zgc:110045	77	93.548	ENSACIG00000002577	zgc:110045	99	93.548	Amphilophus_citrinellus
ENSONIG00000010370	zgc:110045	100	92.857	ENSAPEG00000000729	zgc:110045	100	92.857	Amphiprion_percula
ENSONIG00000010370	zgc:110045	97	85.217	ENSATEG00000011191	zgc:110045	100	84.928	Anabas_testudineus
ENSONIG00000010370	zgc:110045	100	93.779	ENSACLG00000019285	zgc:110045	100	93.779	Astatotilapia_calliptera
ENSONIG00000010370	zgc:110045	76	77.316	ENSBTAG00000030775	PCBP3	97	69.143	Bos_taurus
ENSONIG00000010370	zgc:110045	76	72.892	ENSCAFG00000011907	PCBP3	88	72.892	Canis_familiaris
ENSONIG00000010370	zgc:110045	76	70.270	ENSCHIG00000015841	PCBP3	87	70.270	Capra_hircus
ENSONIG00000010370	zgc:110045	55	67.078	ENSTSYG00000005254	PCBP3	95	67.078	Carlito_syrichta
ENSONIG00000010370	zgc:110045	76	56.231	ENSCAPG00000006767	PCBP3	81	56.231	Cavia_aperea
ENSONIG00000010370	zgc:110045	76	72.673	ENSCPOG00000003648	PCBP3	89	72.673	Cavia_porcellus
ENSONIG00000010370	zgc:110045	76	76.997	ENSCCAG00000024561	PCBP3	99	66.377	Cebus_capucinus
ENSONIG00000010370	zgc:110045	76	77.316	ENSCATG00000038419	PCBP3	88	77.316	Cercocebus_atys
ENSONIG00000010370	zgc:110045	76	72.673	ENSCLAG00000006667	PCBP3	88	72.673	Chinchilla_lanigera
ENSONIG00000010370	zgc:110045	76	77.316	ENSCANG00000026757	PCBP3	88	77.316	Colobus_angolensis_palliatus
ENSONIG00000010370	zgc:110045	76	72.673	ENSCGRG00001006836	Pcbp3	88	72.673	Cricetulus_griseus_chok1gshd
ENSONIG00000010370	zgc:110045	76	72.673	ENSCGRG00000001837	Pcbp3	88	72.673	Cricetulus_griseus_crigri
ENSONIG00000010370	zgc:110045	100	88.018	ENSCSEG00000010020	zgc:110045	99	94.118	Cynoglossus_semilaevis
ENSONIG00000010370	zgc:110045	77	90.431	ENSCVAG00000004726	zgc:110045	93	90.431	Cyprinodon_variegatus
ENSONIG00000010370	zgc:110045	53	79.724	ENSDARG00000057141	zgc:110045	97	79.724	Danio_rerio
ENSONIG00000010370	zgc:110045	76	72.673	ENSDNOG00000049518	PCBP3	89	72.673	Dasypus_novemcinctus
ENSONIG00000010370	zgc:110045	52	69.565	ENSDORG00000003640	Pcbp3	93	69.565	Dipodomys_ordii
ENSONIG00000010370	zgc:110045	58	67.373	ENSEBUG00000009697	zgc:110045	99	67.606	Eptatretus_burgeri
ENSONIG00000010370	zgc:110045	76	76.997	ENSEASG00005007068	PCBP3	88	76.997	Equus_asinus_asinus
ENSONIG00000010370	zgc:110045	76	76.997	ENSECAG00000012413	PCBP3	88	76.997	Equus_caballus
ENSONIG00000010370	zgc:110045	100	82.069	ENSELUG00000019784	zgc:110045	100	82.069	Esox_lucius
ENSONIG00000010370	zgc:110045	76	76.997	ENSFCAG00000014812	PCBP3	88	76.997	Felis_catus
ENSONIG00000010370	zgc:110045	76	76.997	ENSFDAG00000009117	PCBP3	88	76.997	Fukomys_damarensis
ENSONIG00000010370	zgc:110045	77	93.035	ENSFHEG00000018838	-	92	93.035	Fundulus_heteroclitus
ENSONIG00000010370	zgc:110045	74	92.182	ENSGMOG00000005953	zgc:110045	93	92.182	Gadus_morhua
ENSONIG00000010370	zgc:110045	57	78.238	ENSGAFG00000017860	-	100	77.720	Gambusia_affinis
ENSONIG00000010370	zgc:110045	77	96.330	ENSGAFG00000017864	zgc:110045	96	96.330	Gambusia_affinis
ENSONIG00000010370	zgc:110045	76	96.178	ENSGACG00000003044	zgc:110045	97	96.178	Gasterosteus_aculeatus
ENSONIG00000010370	zgc:110045	76	77.316	ENSGGOG00000003683	PCBP3	88	77.316	Gorilla_gorilla
ENSONIG00000010370	zgc:110045	77	99.367	ENSHBUG00000012495	zgc:110045	97	99.367	Haplochromis_burtoni
ENSONIG00000010370	zgc:110045	76	72.673	ENSHGLG00000018620	PCBP3	89	72.673	Heterocephalus_glaber_female
ENSONIG00000010370	zgc:110045	76	72.673	ENSHGLG00100013590	PCBP3	89	72.673	Heterocephalus_glaber_male
ENSONIG00000010370	zgc:110045	76	78.914	ENSHCOG00000000818	zgc:110045	99	89.908	Hippocampus_comes
ENSONIG00000010370	zgc:110045	62	66.540	ENSIPUG00000003932	zgc:110045	97	66.540	Ictalurus_punctatus
ENSONIG00000010370	zgc:110045	76	72.673	ENSSTOG00000007178	PCBP3	88	72.673	Ictidomys_tridecemlineatus
ENSONIG00000010370	zgc:110045	76	72.973	ENSJJAG00000021192	Pcbp3	88	72.973	Jaculus_jaculus
ENSONIG00000010370	zgc:110045	96	77.647	ENSKMAG00000016179	-	95	95.897	Kryptolebias_marmoratus
ENSONIG00000010370	zgc:110045	77	88.288	ENSLBEG00000023074	zgc:110045	97	88.288	Labrus_bergylta
ENSONIG00000010370	zgc:110045	73	75.214	ENSLAFG00000020835	PCBP3	96	75.214	Loxodonta_africana
ENSONIG00000010370	zgc:110045	76	77.316	ENSMFAG00000034574	PCBP3	88	77.316	Macaca_fascicularis
ENSONIG00000010370	zgc:110045	76	77.316	ENSMMUG00000003825	PCBP3	99	71.517	Macaca_mulatta
ENSONIG00000010370	zgc:110045	76	77.316	ENSMNEG00000035551	PCBP3	97	77.316	Macaca_nemestrina
ENSONIG00000010370	zgc:110045	76	77.316	ENSMLEG00000038785	PCBP3	97	69.565	Mandrillus_leucophaeus
ENSONIG00000010370	zgc:110045	77	97.452	ENSMAMG00000014389	zgc:110045	99	97.452	Mastacembelus_armatus
ENSONIG00000010370	zgc:110045	100	93.779	ENSMZEG00005011785	zgc:110045	100	93.779	Maylandia_zebra
ENSONIG00000010370	zgc:110045	75	73.252	ENSMAUG00000007036	Pcbp3	87	73.252	Mesocricetus_auratus
ENSONIG00000010370	zgc:110045	76	76.997	ENSMICG00000012679	PCBP3	88	76.997	Microcebus_murinus
ENSONIG00000010370	zgc:110045	76	72.673	ENSMOCG00000016127	Pcbp3	88	72.673	Microtus_ochrogaster
ENSONIG00000010370	zgc:110045	56	81.675	ENSMMOG00000008398	-	100	81.152	Mola_mola
ENSONIG00000010370	zgc:110045	67	89.552	ENSMMOG00000008399	zgc:110045	95	89.552	Mola_mola
ENSONIG00000010370	zgc:110045	76	72.892	MGP_CAROLIEiJ_G0015475	Pcbp3	99	73.799	Mus_caroli
ENSONIG00000010370	zgc:110045	76	72.892	ENSMUSG00000001120	Pcbp3	99	73.799	Mus_musculus
ENSONIG00000010370	zgc:110045	76	72.892	MGP_PahariEiJ_G0030889	Pcbp3	99	73.799	Mus_pahari
ENSONIG00000010370	zgc:110045	76	72.892	MGP_SPRETEiJ_G0016288	Pcbp3	99	73.799	Mus_spretus
ENSONIG00000010370	zgc:110045	76	72.673	ENSMLUG00000003074	PCBP3	88	72.673	Myotis_lucifugus
ENSONIG00000010370	zgc:110045	76	72.673	ENSNGAG00000005416	Pcbp3	88	72.673	Nannospalax_galili
ENSONIG00000010370	zgc:110045	100	94.240	ENSNBRG00000017646	zgc:110045	100	94.240	Neolamprologus_brichardi
ENSONIG00000010370	zgc:110045	76	77.316	ENSNLEG00000002639	PCBP3	88	77.316	Nomascus_leucogenys
ENSONIG00000010370	zgc:110045	76	66.857	ENSMEUG00000012960	PCBP3	97	66.857	Notamacropus_eugenii
ENSONIG00000010370	zgc:110045	76	70.270	ENSODEG00000012873	PCBP3	89	70.270	Octodon_degus
ENSONIG00000010370	zgc:110045	92	72.266	ENSOANG00000006265	PCBP3	90	72.266	Ornithorhynchus_anatinus
ENSONIG00000010370	zgc:110045	100	88.249	ENSORLG00000014385	-	100	88.479	Oryzias_latipes
ENSONIG00000010370	zgc:110045	100	87.760	ENSORLG00020003139	zgc:110045	100	87.991	Oryzias_latipes_hni
ENSONIG00000010370	zgc:110045	100	89.171	ENSOMEG00000015459	-	100	89.401	Oryzias_melastigma
ENSONIG00000010370	zgc:110045	76	70.393	ENSOARG00000012704	PCBP3	88	70.393	Ovis_aries
ENSONIG00000010370	zgc:110045	76	77.316	ENSPPAG00000021940	PCBP3	88	77.316	Pan_paniscus
ENSONIG00000010370	zgc:110045	76	76.997	ENSPPRG00000003933	PCBP3	88	76.997	Panthera_pardus
ENSONIG00000010370	zgc:110045	76	62.975	ENSPTIG00000012038	PCBP3	87	63.578	Panthera_tigris_altaica
ENSONIG00000010370	zgc:110045	76	56.869	ENSPTRG00000014010	PCBP3	97	51.420	Pan_troglodytes
ENSONIG00000010370	zgc:110045	76	77.316	ENSPANG00000023631	PCBP3	88	77.316	Papio_anubis
ENSONIG00000010370	zgc:110045	52	58.065	ENSPMGG00000022531	-	96	58.065	Periophthalmus_magnuspinnatus
ENSONIG00000010370	zgc:110045	100	74.943	ENSPMGG00000021588	-	99	74.713	Periophthalmus_magnuspinnatus
ENSONIG00000010370	zgc:110045	76	72.673	ENSPEMG00000000587	Pcbp3	88	72.673	Peromyscus_maniculatus_bairdii
ENSONIG00000010370	zgc:110045	81	94.277	ENSPFOG00000002348	zgc:110045	100	94.277	Poecilia_formosa
ENSONIG00000010370	zgc:110045	53	92.202	ENSPLAG00000017488	zgc:110045	96	92.202	Poecilia_latipinna
ENSONIG00000010370	zgc:110045	77	96.330	ENSPMEG00000012762	zgc:110045	96	96.330	Poecilia_mexicana
ENSONIG00000010370	zgc:110045	100	90.187	ENSPREG00000001797	zgc:110045	95	97.209	Poecilia_reticulata
ENSONIG00000010370	zgc:110045	61	69.732	ENSPPYG00000011525	-	94	69.732	Pongo_abelii
ENSONIG00000010370	zgc:110045	74	58.824	ENSPCAG00000001454	PCBP3	98	58.824	Procavia_capensis
ENSONIG00000010370	zgc:110045	76	76.997	ENSPCOG00000013797	PCBP3	88	76.997	Propithecus_coquereli
ENSONIG00000010370	zgc:110045	60	76.471	ENSPVAG00000000832	PCBP3	73	76.471	Pteropus_vampyrus
ENSONIG00000010370	zgc:110045	77	94.470	ENSPNYG00000004637	zgc:110045	99	94.470	Pundamilia_nyererei
ENSONIG00000010370	zgc:110045	57	86.224	ENSPNYG00000004656	-	98	86.224	Pundamilia_nyererei
ENSONIG00000010370	zgc:110045	53	80.184	ENSPNAG00000004501	zgc:110045	97	80.184	Pygocentrus_nattereri
ENSONIG00000010370	zgc:110045	76	77.316	ENSRROG00000034567	PCBP3	88	77.316	Rhinopithecus_roxellana
ENSONIG00000010370	zgc:110045	76	77.316	ENSSBOG00000005789	PCBP3	88	77.316	Saimiri_boliviensis_boliviensis
ENSONIG00000010370	zgc:110045	100	91.898	ENSSMAG00000013541	zgc:110045	100	91.898	Scophthalmus_maximus
ENSONIG00000010370	zgc:110045	97	91.304	ENSSDUG00000019371	zgc:110045	100	91.304	Seriola_dumerili
ENSONIG00000010370	zgc:110045	100	92.857	ENSSLDG00000021064	zgc:110045	100	92.857	Seriola_lalandi_dorsalis
ENSONIG00000010370	zgc:110045	50	62.136	ENSSARG00000007629	-	100	62.136	Sorex_araneus
ENSONIG00000010370	zgc:110045	77	99.367	ENSSPAG00000000563	zgc:110045	97	99.367	Stegastes_partitus
ENSONIG00000010370	zgc:110045	76	76.997	ENSSSCG00000023041	PCBP3	88	76.997	Sus_scrofa
ENSONIG00000010370	zgc:110045	77	93.467	ENSTRUG00000017789	zgc:110045	98	93.467	Takifugu_rubripes
ENSONIG00000010370	zgc:110045	74	87.895	ENSTNIG00000003546	zgc:110045	94	87.895	Tetraodon_nigroviridis
ENSONIG00000010370	zgc:110045	58	59.072	ENSTBEG00000011882	-	73	59.072	Tupaia_belangeri
ENSONIG00000010370	zgc:110045	73	76.449	ENSUAMG00000006491	PCBP3	96	76.449	Ursus_americanus
ENSONIG00000010370	zgc:110045	76	63.717	ENSUMAG00000025403	PCBP3	88	63.717	Ursus_maritimus
ENSONIG00000010370	zgc:110045	76	68.000	ENSVVUG00000023862	PCBP3	97	64.286	Vulpes_vulpes
ENSONIG00000010370	zgc:110045	84	93.567	ENSXCOG00000005968	zgc:110045	88	93.567	Xiphophorus_couchianus
ENSONIG00000010370	zgc:110045	100	89.559	ENSXMAG00000008030	zgc:110045	100	89.327	Xiphophorus_maculatus