EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000010552 (Gene tree)
Gene ID: -
Gene Symbol: srrm4
Alias: -
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 62996 bases
Position: chrGL831281.1:291120-354115
Accession: 100694892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000013267	SRRM_C	PF15230.6	1.4e-26	1	1
ENSONIP00000013268	SRRM_C	PF15230.6	1.4e-26	1	1
ENSONIP00000013265	SRRM_C	PF15230.6	1.9e-26	1	1
ENSONIP00000013266	SRRM_C	PF15230.6	2.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000013275	-	2600	-	ENSONIP00000013265	624 (aa)	XP_005473681	I3JWM0
ENSONIT00000013277	-	1515	-	ENSONIP00000013267	505 (aa)	-	I3JWM2
ENSONIT00000013276	-	1518	-	ENSONIP00000013266	505 (aa)	-	I3JWM1
ENSONIT00000013278	-	1518	-	ENSONIP00000013268	506 (aa)	-	I3JWM3

Gene Model

Click here to download ENSONIG00000010552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000010552's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000010552	srrm4	99	85.828	ENSAPOG00000010969	srrm4	99	85.032	Acanthochromis_polyacanthus
ENSONIG00000010552	srrm4	68	88.235	ENSACIG00000002171	srrm4	74	76.124	Amphilophus_citrinellus
ENSONIG00000010552	srrm4	99	83.968	ENSAOCG00000019891	srrm4	99	82.698	Amphiprion_ocellaris
ENSONIG00000010552	srrm4	99	83.123	ENSAPEG00000011132	srrm4	99	80.915	Amphiprion_percula
ENSONIG00000010552	srrm4	64	92.683	ENSATEG00000005330	srrm4	80	65.027	Anabas_testudineus
ENSONIG00000010552	srrm4	70	86.517	ENSACLG00000023532	srrm4	75	85.714	Astatotilapia_calliptera
ENSONIG00000010552	srrm4	74	49.618	ENSELUG00000004986	srrm4	84	59.145	Esox_lucius
ENSONIG00000010552	srrm4	70	62.185	ENSFHEG00000005091	srrm4	85	60.504	Fundulus_heteroclitus
ENSONIG00000010552	srrm4	84	51.034	ENSGMOG00000006714	srrm4	93	52.857	Gadus_morhua
ENSONIG00000010552	srrm4	63	91.667	ENSGAFG00000006706	srrm4	72	59.557	Gambusia_affinis
ENSONIG00000010552	srrm4	99	97.592	ENSHBUG00000010505	srrm4	99	97.592	Haplochromis_burtoni
ENSONIG00000010552	srrm4	97	69.494	ENSKMAG00000001873	srrm4	99	70.794	Kryptolebias_marmoratus
ENSONIG00000010552	srrm4	99	77.143	ENSLBEG00000008471	srrm4	99	78.413	Labrus_bergylta
ENSONIG00000010552	srrm4	59	90.625	ENSLOCG00000003219	srrm4	59	65.934	Lepisosteus_oculatus
ENSONIG00000010552	srrm4	71	65.352	ENSMAMG00000004280	srrm4	74	63.764	Mastacembelus_armatus
ENSONIG00000010552	srrm4	70	86.517	ENSMZEG00005021733	srrm4	75	85.714	Maylandia_zebra
ENSONIG00000010552	srrm4	89	80.179	ENSMALG00000001422	srrm4	96	80.328	Monopterus_albus
ENSONIG00000010552	srrm4	70	82.817	ENSNBRG00000015313	srrm4	67	81.337	Neolamprologus_brichardi
ENSONIG00000010552	srrm4	99	65.978	ENSOMEG00000012376	srrm4	99	62.480	Oryzias_melastigma
ENSONIG00000010552	srrm4	58	59.420	ENSPKIG00000009374	srrm4	58	78.481	Paramormyrops_kingsleyae
ENSONIG00000010552	srrm4	67	62.687	ENSPMGG00000008387	srrm4	61	48.571	Periophthalmus_magnuspinnatus
ENSONIG00000010552	srrm4	89	64.000	ENSPFOG00000014600	srrm4	99	66.295	Poecilia_formosa
ENSONIG00000010552	srrm4	66	94.872	ENSPLAG00000002006	srrm4	79	57.337	Poecilia_latipinna
ENSONIG00000010552	srrm4	63	94.872	ENSPMEG00000017802	srrm4	78	59.834	Poecilia_mexicana
ENSONIG00000010552	srrm4	50	83.453	ENSPREG00000004567	srrm4	73	61.173	Poecilia_reticulata
ENSONIG00000010552	srrm4	70	85.955	ENSPNYG00000007785	srrm4	73	85.393	Pundamilia_nyererei
ENSONIG00000010552	srrm4	57	43.700	ENSPNAG00000010426	srrm4	95	45.896	Pygocentrus_nattereri
ENSONIG00000010552	srrm4	63	94.737	ENSSDUG00000017519	srrm4	99	66.189	Seriola_dumerili
ENSONIG00000010552	srrm4	66	77.083	ENSSLDG00000015130	srrm4	75	68.800	Seriola_lalandi_dorsalis
ENSONIG00000010552	srrm4	79	73.803	ENSSPAG00000016190	srrm4	97	77.810	Stegastes_partitus
ENSONIG00000010552	srrm4	100	72.100	ENSXMAG00000002658	srrm4	100	68.847	Xiphophorus_maculatus