EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000010714 (Gene tree)
Gene ID: 100712371
Gene Symbol: snrnp200
Alias: -
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 13613 bases
Position: chrGL831172.1:842850-856462
Accession: 100712371
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000013470	ResIII	PF04851.15	4.6e-26	1	2
ENSONIP00000013470	ResIII	PF04851.15	4.6e-26	2	2
ENSONIP00000013470	DEAD	PF00270.29	2.5e-53	1	2
ENSONIP00000013470	DEAD	PF00270.29	2.5e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000013480	-	6510	XM_003445684	ENSONIP00000013470	2136 (aa)	XP_003445732	I3JX75

Gene Model

Click here to download ENSONIG00000010714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000010714's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000010714	snrnp200	95	40.447	ENSONIG00000016540	ascc3	81	45.245
ENSONIG00000010714	snrnp200	73	31.726	ENSONIG00000010590	hfm1	81	31.726

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000010714	snrnp200	99	90.403	ENSG00000144028	SNRNP200	99	90.512	Homo_sapiens
ENSONIG00000010714	snrnp200	100	97.800	ENSAPOG00000010223	snrnp200	100	97.800	Acanthochromis_polyacanthus
ENSONIG00000010714	snrnp200	99	90.449	ENSAMEG00000008996	SNRNP200	99	90.559	Ailuropoda_melanoleuca
ENSONIG00000010714	snrnp200	97	98.392	ENSACIG00000001764	snrnp200	98	98.392	Amphilophus_citrinellus
ENSONIG00000010714	snrnp200	100	97.706	ENSAOCG00000024593	snrnp200	100	97.706	Amphiprion_ocellaris
ENSONIG00000010714	snrnp200	97	97.160	ENSAPEG00000012554	snrnp200	100	97.160	Amphiprion_percula
ENSONIG00000010714	snrnp200	100	97.659	ENSATEG00000022522	snrnp200	100	97.659	Anabas_testudineus
ENSONIG00000010714	snrnp200	99	90.570	ENSAPLG00000004313	SNRNP200	99	90.634	Anas_platyrhynchos
ENSONIG00000010714	snrnp200	99	89.697	ENSACAG00000000434	SNRNP200	100	89.697	Anolis_carolinensis
ENSONIG00000010714	snrnp200	99	87.623	ENSANAG00000036625	SNRNP200	99	87.723	Aotus_nancymaae
ENSONIG00000010714	snrnp200	100	99.579	ENSACLG00000011188	snrnp200	100	99.579	Astatotilapia_calliptera
ENSONIG00000010714	snrnp200	99	94.217	ENSAMXG00000005684	snrnp200	99	94.217	Astyanax_mexicanus
ENSONIG00000010714	snrnp200	99	90.122	ENSBTAG00000000848	SNRNP200	99	90.230	Bos_taurus
ENSONIG00000010714	snrnp200	99	90.356	ENSCJAG00000007514	SNRNP200	99	90.465	Callithrix_jacchus
ENSONIG00000010714	snrnp200	99	89.687	ENSCAFG00020019979	SNRNP200	99	91.681	Canis_lupus_dingo
ENSONIG00000010714	snrnp200	99	90.309	ENSCHIG00000020611	SNRNP200	99	90.418	Capra_hircus
ENSONIG00000010714	snrnp200	99	90.403	ENSTSYG00000010467	SNRNP200	99	90.512	Carlito_syrichta
ENSONIG00000010714	snrnp200	99	89.939	ENSCAPG00000017234	SNRNP200	99	90.047	Cavia_aperea
ENSONIG00000010714	snrnp200	99	90.262	ENSCPOG00000006776	SNRNP200	99	90.371	Cavia_porcellus
ENSONIG00000010714	snrnp200	99	90.356	ENSCCAG00000033962	SNRNP200	99	90.465	Cebus_capucinus
ENSONIG00000010714	snrnp200	99	90.403	ENSCATG00000015790	SNRNP200	99	90.512	Cercocebus_atys
ENSONIG00000010714	snrnp200	99	90.356	ENSCLAG00000004116	SNRNP200	99	90.465	Chinchilla_lanigera
ENSONIG00000010714	snrnp200	99	90.449	ENSCSAG00000017369	SNRNP200	99	90.559	Chlorocebus_sabaeus
ENSONIG00000010714	snrnp200	74	93.701	ENSCHOG00000012981	-	58	93.701	Choloepus_hoffmanni
ENSONIG00000010714	snrnp200	99	90.323	ENSCPBG00000022571	SNRNP200	99	90.385	Chrysemys_picta_bellii
ENSONIG00000010714	snrnp200	99	76.062	ENSCING00000005082	-	99	76.393	Ciona_intestinalis
ENSONIG00000010714	snrnp200	94	90.095	ENSCANG00000033932	SNRNP200	99	90.210	Colobus_angolensis_palliatus
ENSONIG00000010714	snrnp200	99	90.403	ENSCGRG00001022610	Snrnp200	99	90.512	Cricetulus_griseus_chok1gshd
ENSONIG00000010714	snrnp200	99	89.902	ENSCGRG00000016472	Snrnp200	99	90.009	Cricetulus_griseus_crigri
ENSONIG00000010714	snrnp200	99	95.876	ENSCSEG00000016399	snrnp200	99	96.002	Cynoglossus_semilaevis
ENSONIG00000010714	snrnp200	100	91.479	ENSCVAG00000017631	snrnp200	100	91.479	Cyprinodon_variegatus
ENSONIG00000010714	snrnp200	100	94.242	ENSDARG00000077536	snrnp200	99	94.264	Danio_rerio
ENSONIG00000010714	snrnp200	99	89.139	ENSDNOG00000011227	SNRNP200	99	89.244	Dasypus_novemcinctus
ENSONIG00000010714	snrnp200	99	87.944	ENSDORG00000005861	Snrnp200	99	88.045	Dipodomys_ordii
ENSONIG00000010714	snrnp200	100	73.976	FBgn0263599	l(3)72Ab	99	74.298	Drosophila_melanogaster
ENSONIG00000010714	snrnp200	95	89.836	ENSETEG00000000162	SNRNP200	74	89.836	Echinops_telfairi
ENSONIG00000010714	snrnp200	83	80.897	ENSEBUG00000016524	snrnp200	95	80.897	Eptatretus_burgeri
ENSONIG00000010714	snrnp200	99	89.417	ENSEASG00005001884	SNRNP200	99	89.429	Equus_asinus_asinus
ENSONIG00000010714	snrnp200	99	90.449	ENSECAG00000019675	SNRNP200	99	90.559	Equus_caballus
ENSONIG00000010714	snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSONIG00000010714	snrnp200	99	95.677	ENSELUG00000018948	snrnp200	99	95.677	Esox_lucius
ENSONIG00000010714	snrnp200	99	90.496	ENSFCAG00000010699	SNRNP200	99	90.606	Felis_catus
ENSONIG00000010714	snrnp200	93	86.607	ENSFALG00000001368	-	94	86.607	Ficedula_albicollis
ENSONIG00000010714	snrnp200	99	90.262	ENSFDAG00000004683	SNRNP200	99	90.371	Fukomys_damarensis
ENSONIG00000010714	snrnp200	100	94.054	ENSFHEG00000003786	snrnp200	100	94.054	Fundulus_heteroclitus
ENSONIG00000010714	snrnp200	100	94.626	ENSGMOG00000004881	snrnp200	99	94.510	Gadus_morhua
ENSONIG00000010714	snrnp200	100	94.148	ENSGAFG00000010807	snrnp200	100	94.148	Gambusia_affinis
ENSONIG00000010714	snrnp200	100	96.684	ENSGACG00000011474	snrnp200	99	96.684	Gasterosteus_aculeatus
ENSONIG00000010714	snrnp200	95	92.169	ENSGAGG00000016069	SNRNP200	97	98.387	Gopherus_agassizii
ENSONIG00000010714	snrnp200	99	90.403	ENSGGOG00000005174	SNRNP200	99	90.512	Gorilla_gorilla
ENSONIG00000010714	snrnp200	97	97.007	ENSHBUG00000011322	snrnp200	99	97.007	Haplochromis_burtoni
ENSONIG00000010714	snrnp200	99	90.309	ENSHGLG00000006654	SNRNP200	99	90.418	Heterocephalus_glaber_female
ENSONIG00000010714	snrnp200	99	90.309	ENSHGLG00100018594	SNRNP200	99	90.418	Heterocephalus_glaber_male
ENSONIG00000010714	snrnp200	99	90.356	ENSSTOG00000016351	SNRNP200	99	90.465	Ictidomys_tridecemlineatus
ENSONIG00000010714	snrnp200	99	90.262	ENSJJAG00000023659	Snrnp200	99	90.371	Jaculus_jaculus
ENSONIG00000010714	snrnp200	100	94.260	ENSKMAG00000003665	snrnp200	100	94.260	Kryptolebias_marmoratus
ENSONIG00000010714	snrnp200	100	97.191	ENSLBEG00000021585	snrnp200	100	97.191	Labrus_bergylta
ENSONIG00000010714	snrnp200	82	92.034	ENSLACG00000000226	SNRNP200	99	92.166	Latimeria_chalumnae
ENSONIG00000010714	snrnp200	100	93.966	ENSLOCG00000015198	snrnp200	99	93.988	Lepisosteus_oculatus
ENSONIG00000010714	snrnp200	99	90.262	ENSLAFG00000015626	SNRNP200	99	90.371	Loxodonta_africana
ENSONIG00000010714	snrnp200	99	90.356	ENSMFAG00000040174	SNRNP200	99	91.570	Macaca_fascicularis
ENSONIG00000010714	snrnp200	99	90.356	ENSMMUG00000023261	SNRNP200	99	90.465	Macaca_mulatta
ENSONIG00000010714	snrnp200	99	90.309	ENSMNEG00000032398	SNRNP200	99	90.418	Macaca_nemestrina
ENSONIG00000010714	snrnp200	99	90.403	ENSMLEG00000019083	SNRNP200	99	91.570	Mandrillus_leucophaeus
ENSONIG00000010714	snrnp200	100	97.052	ENSMAMG00000007851	snrnp200	100	97.052	Mastacembelus_armatus
ENSONIG00000010714	snrnp200	97	97.007	ENSMZEG00005010787	snrnp200	99	97.007	Maylandia_zebra
ENSONIG00000010714	snrnp200	97	90.179	ENSMGAG00000001831	SNRNP200	99	90.297	Meleagris_gallopavo
ENSONIG00000010714	snrnp200	99	90.449	ENSMAUG00000011825	Snrnp200	99	90.559	Mesocricetus_auratus
ENSONIG00000010714	snrnp200	99	90.449	ENSMICG00000004710	SNRNP200	99	90.559	Microcebus_murinus
ENSONIG00000010714	snrnp200	99	88.670	ENSMOCG00000011814	Snrnp200	99	88.774	Microtus_ochrogaster
ENSONIG00000010714	snrnp200	99	95.157	ENSMMOG00000014167	snrnp200	99	95.157	Mola_mola
ENSONIG00000010714	snrnp200	99	90.356	ENSMODG00000008475	SNRNP200	99	90.418	Monodelphis_domestica
ENSONIG00000010714	snrnp200	100	97.472	ENSMALG00000001973	snrnp200	100	97.472	Monopterus_albus
ENSONIG00000010714	snrnp200	99	90.309	MGP_CAROLIEiJ_G0024250	Snrnp200	99	90.418	Mus_caroli
ENSONIG00000010714	snrnp200	99	90.356	ENSMUSG00000003660	Snrnp200	99	90.465	Mus_musculus
ENSONIG00000010714	snrnp200	99	90.356	MGP_PahariEiJ_G0025695	Snrnp200	99	90.465	Mus_pahari
ENSONIG00000010714	snrnp200	99	90.356	MGP_SPRETEiJ_G0025170	Snrnp200	99	92.676	Mus_spretus
ENSONIG00000010714	snrnp200	99	90.496	ENSMPUG00000008949	SNRNP200	99	90.606	Mustela_putorius_furo
ENSONIG00000010714	snrnp200	99	89.949	ENSMLUG00000010493	SNRNP200	99	90.056	Myotis_lucifugus
ENSONIG00000010714	snrnp200	99	87.125	ENSMLUG00000027511	-	99	87.224	Myotis_lucifugus
ENSONIG00000010714	snrnp200	99	90.403	ENSNGAG00000021993	Snrnp200	99	90.512	Nannospalax_galili
ENSONIG00000010714	snrnp200	90	99.536	ENSNBRG00000017960	snrnp200	98	99.536	Neolamprologus_brichardi
ENSONIG00000010714	snrnp200	99	86.053	ENSNLEG00000000025	SNRNP200	99	86.241	Nomascus_leucogenys
ENSONIG00000010714	snrnp200	99	92.784	ENSMEUG00000010532	SNRNP200	78	91.837	Notamacropus_eugenii
ENSONIG00000010714	snrnp200	96	89.251	ENSOPRG00000015464	SNRNP200	96	89.371	Ochotona_princeps
ENSONIG00000010714	snrnp200	99	90.262	ENSODEG00000008366	SNRNP200	99	90.371	Octodon_degus
ENSONIG00000010714	snrnp200	99	90.356	ENSOCUG00000009864	SNRNP200	99	90.465	Oryctolagus_cuniculus
ENSONIG00000010714	snrnp200	99	95.783	ENSORLG00000012286	snrnp200	99	95.841	Oryzias_latipes
ENSONIG00000010714	snrnp200	99	95.923	ENSORLG00020004648	snrnp200	99	95.957	Oryzias_latipes_hni
ENSONIG00000010714	snrnp200	99	95.970	ENSORLG00015019114	snrnp200	99	96.004	Oryzias_latipes_hsok
ENSONIG00000010714	snrnp200	99	96.145	ENSOMEG00000011834	snrnp200	99	96.145	Oryzias_melastigma
ENSONIG00000010714	snrnp200	99	90.403	ENSOGAG00000006879	SNRNP200	99	90.512	Otolemur_garnettii
ENSONIG00000010714	snrnp200	99	89.565	ENSOARG00000013949	SNRNP200	99	89.671	Ovis_aries
ENSONIG00000010714	snrnp200	99	90.403	ENSPPAG00000041559	SNRNP200	99	90.512	Pan_paniscus
ENSONIG00000010714	snrnp200	99	90.496	ENSPPRG00000004435	SNRNP200	99	90.606	Panthera_pardus
ENSONIG00000010714	snrnp200	99	90.122	ENSPTIG00000006380	SNRNP200	99	90.230	Panthera_tigris_altaica
ENSONIG00000010714	snrnp200	99	90.403	ENSPTRG00000012230	SNRNP200	99	90.512	Pan_troglodytes
ENSONIG00000010714	snrnp200	99	90.403	ENSPANG00000006017	SNRNP200	99	90.512	Papio_anubis
ENSONIG00000010714	snrnp200	100	94.993	ENSPKIG00000014762	snrnp200	99	95.061	Paramormyrops_kingsleyae
ENSONIG00000010714	snrnp200	99	89.518	ENSPSIG00000008580	SNRNP200	99	89.577	Pelodiscus_sinensis
ENSONIG00000010714	snrnp200	99	90.309	ENSPCIG00000023050	SNRNP200	99	90.371	Phascolarctos_cinereus
ENSONIG00000010714	snrnp200	100	96.584	ENSPFOG00000015110	snrnp200	100	96.584	Poecilia_formosa
ENSONIG00000010714	snrnp200	97	96.975	ENSPLAG00000006711	snrnp200	99	96.975	Poecilia_latipinna
ENSONIG00000010714	snrnp200	97	96.920	ENSPMEG00000021166	snrnp200	99	96.920	Poecilia_mexicana
ENSONIG00000010714	snrnp200	100	96.582	ENSPREG00000008875	snrnp200	100	96.582	Poecilia_reticulata
ENSONIG00000010714	snrnp200	99	90.403	ENSPPYG00000012068	SNRNP200	99	90.512	Pongo_abelii
ENSONIG00000010714	snrnp200	97	94.872	ENSPCAG00000008536	SNRNP200	85	97.872	Procavia_capensis
ENSONIG00000010714	snrnp200	99	90.403	ENSPCOG00000024608	SNRNP200	99	90.512	Propithecus_coquereli
ENSONIG00000010714	snrnp200	96	90.583	ENSPVAG00000005860	SNRNP200	92	90.825	Pteropus_vampyrus
ENSONIG00000010714	snrnp200	100	94.771	ENSPNYG00000017476	snrnp200	100	94.771	Pundamilia_nyererei
ENSONIG00000010714	snrnp200	100	90.407	ENSPNAG00000010998	snrnp200	99	90.461	Pygocentrus_nattereri
ENSONIG00000010714	snrnp200	99	90.449	ENSRNOG00000012157	Snrnp200	99	90.559	Rattus_norvegicus
ENSONIG00000010714	snrnp200	99	90.403	ENSRBIG00000044690	-	99	90.512	Rhinopithecus_bieti
ENSONIG00000010714	snrnp200	99	90.403	ENSRROG00000037952	-	99	90.512	Rhinopithecus_roxellana
ENSONIG00000010714	snrnp200	99	90.356	ENSSBOG00000035471	SNRNP200	99	90.465	Saimiri_boliviensis_boliviensis
ENSONIG00000010714	snrnp200	97	90.131	ENSSHAG00000000758	SNRNP200	99	90.200	Sarcophilus_harrisii
ENSONIG00000010714	snrnp200	99	95.019	ENSSFOG00015018826	snrnp200	99	95.019	Scleropages_formosus
ENSONIG00000010714	snrnp200	100	97.425	ENSSMAG00000005463	snrnp200	100	97.425	Scophthalmus_maximus
ENSONIG00000010714	snrnp200	100	97.800	ENSSDUG00000021410	snrnp200	100	97.800	Seriola_dumerili
ENSONIG00000010714	snrnp200	100	97.659	ENSSLDG00000010884	snrnp200	100	97.659	Seriola_lalandi_dorsalis
ENSONIG00000010714	snrnp200	95	87.936	ENSSARG00000010728	SNRNP200	96	87.903	Sorex_araneus
ENSONIG00000010714	snrnp200	99	90.684	ENSSPUG00000003726	-	99	90.747	Sphenodon_punctatus
ENSONIG00000010714	snrnp200	100	97.987	ENSSPAG00000001842	snrnp200	100	97.987	Stegastes_partitus
ENSONIG00000010714	snrnp200	99	90.496	ENSSSCG00000008127	SNRNP200	99	90.606	Sus_scrofa
ENSONIG00000010714	snrnp200	98	82.342	ENSTGUG00000014475	-	100	82.270	Taeniopygia_guttata
ENSONIG00000010714	snrnp200	100	96.489	ENSTRUG00000001307	snrnp200	100	96.489	Takifugu_rubripes
ENSONIG00000010714	snrnp200	99	91.348	ENSTNIG00000004320	snrnp200	99	84.240	Tetraodon_nigroviridis
ENSONIG00000010714	snrnp200	82	92.488	ENSTBEG00000003329	-	67	92.488	Tupaia_belangeri
ENSONIG00000010714	snrnp200	99	90.262	ENSTTRG00000004983	SNRNP200	99	90.371	Tursiops_truncatus
ENSONIG00000010714	snrnp200	75	83.527	ENSUAMG00000008395	-	95	83.236	Ursus_americanus
ENSONIG00000010714	snrnp200	99	90.496	ENSUMAG00000012385	SNRNP200	99	90.606	Ursus_maritimus
ENSONIG00000010714	snrnp200	87	93.361	ENSVPAG00000006434	SNRNP200	66	93.361	Vicugna_pacos
ENSONIG00000010714	snrnp200	99	90.285	ENSVVUG00000026247	SNRNP200	99	90.394	Vulpes_vulpes
ENSONIG00000010714	snrnp200	99	90.318	ENSXETG00000001243	snrnp200	99	90.380	Xenopus_tropicalis
ENSONIG00000010714	snrnp200	97	97.053	ENSXMAG00000002058	snrnp200	98	97.053	Xiphophorus_maculatus