EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000010848 (Gene tree)
Gene ID: 100694144
Gene Symbol: sf3a1
Alias: -
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 5462 bases
Position: chrGL831172.1:1356057-1361518
Accession: 100694144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000013643	PRP21_like_P	PF12230.8	7.2e-53	1	1
ENSONIP00000013644	PRP21_like_P	PF12230.8	7.5e-53	1	1
ENSONIP00000013644	Surp	PF01805.20	4.9e-46	1	2
ENSONIP00000013644	Surp	PF01805.20	4.9e-46	2	2
ENSONIP00000013643	Surp	PF01805.20	5e-46	1	2
ENSONIP00000013643	Surp	PF01805.20	5e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000013653	-	2389	-	ENSONIP00000013643	785 (aa)	XP_003445582	I3JXP8
ENSONIT00000013654	-	2397	-	ENSONIP00000013644	798 (aa)	-	I3JXP9

Gene Model

Click here to download ENSONIG00000010848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000010848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000010848	sf3a1	98	85.938	ENSG00000099995	SF3A1	100	84.230	Homo_sapiens
ENSONIG00000010848	sf3a1	100	96.947	ENSAPOG00000020465	sf3a1	100	96.947	Acanthochromis_polyacanthus
ENSONIG00000010848	sf3a1	99	85.290	ENSAMEG00000007737	SF3A1	100	83.855	Ailuropoda_melanoleuca
ENSONIG00000010848	sf3a1	100	97.328	ENSACIG00000020672	sf3a1	100	97.328	Amphilophus_citrinellus
ENSONIG00000010848	sf3a1	100	96.819	ENSAOCG00000003060	sf3a1	100	96.819	Amphiprion_ocellaris
ENSONIG00000010848	sf3a1	100	96.947	ENSAPEG00000010735	sf3a1	100	96.947	Amphiprion_percula
ENSONIG00000010848	sf3a1	97	95.556	ENSATEG00000021201	sf3a1	96	95.948	Anabas_testudineus
ENSONIG00000010848	sf3a1	96	84.828	ENSAPLG00000009057	SF3A1	99	84.334	Anas_platyrhynchos
ENSONIG00000010848	sf3a1	100	81.582	ENSACAG00000009415	SF3A1	100	82.200	Anolis_carolinensis
ENSONIG00000010848	sf3a1	99	84.783	ENSANAG00000032045	SF3A1	100	84.250	Aotus_nancymaae
ENSONIG00000010848	sf3a1	100	99.108	ENSACLG00000012622	sf3a1	100	99.108	Astatotilapia_calliptera
ENSONIG00000010848	sf3a1	99	88.153	ENSAMXG00000005382	sf3a1	99	88.790	Astyanax_mexicanus
ENSONIG00000010848	sf3a1	99	84.910	ENSBTAG00000003390	SF3A1	100	84.230	Bos_taurus
ENSONIG00000010848	sf3a1	81	45.747	WBGene00004188	prp-21	59	51.027	Caenorhabditis_elegans
ENSONIG00000010848	sf3a1	99	84.655	ENSCJAG00000010370	SF3A1	100	84.277	Callithrix_jacchus
ENSONIG00000010848	sf3a1	99	84.783	ENSCAFG00000012559	SF3A1	100	84.105	Canis_familiaris
ENSONIG00000010848	sf3a1	99	84.783	ENSCAFG00020000838	SF3A1	100	84.105	Canis_lupus_dingo
ENSONIG00000010848	sf3a1	99	85.038	ENSCHIG00000018642	SF3A1	100	84.355	Capra_hircus
ENSONIG00000010848	sf3a1	99	85.290	ENSTSYG00000004739	SF3A1	100	84.250	Carlito_syrichta
ENSONIG00000010848	sf3a1	95	69.067	ENSCAPG00000015414	SF3A1	98	69.478	Cavia_aperea
ENSONIG00000010848	sf3a1	99	85.038	ENSCPOG00000014589	SF3A1	100	84.105	Cavia_porcellus
ENSONIG00000010848	sf3a1	99	84.783	ENSCCAG00000032006	SF3A1	100	84.250	Cebus_capucinus
ENSONIG00000010848	sf3a1	99	84.783	ENSCATG00000029241	SF3A1	100	84.375	Cercocebus_atys
ENSONIG00000010848	sf3a1	98	85.417	ENSCLAG00000006508	SF3A1	100	84.277	Chinchilla_lanigera
ENSONIG00000010848	sf3a1	98	85.547	ENSCSAG00000009470	SF3A1	100	84.230	Chlorocebus_sabaeus
ENSONIG00000010848	sf3a1	59	88.603	ENSCHOG00000005201	SF3A1	63	88.971	Choloepus_hoffmanni
ENSONIG00000010848	sf3a1	100	82.197	ENSCPBG00000007595	SF3A1	100	81.313	Chrysemys_picta_bellii
ENSONIG00000010848	sf3a1	97	51.908	ENSCING00000008526	-	98	51.527	Ciona_intestinalis
ENSONIG00000010848	sf3a1	94	61.404	ENSCSAVG00000005608	-	92	65.734	Ciona_savignyi
ENSONIG00000010848	sf3a1	98	85.547	ENSCANG00000033564	SF3A1	100	84.230	Colobus_angolensis_palliatus
ENSONIG00000010848	sf3a1	97	85.789	ENSCGRG00001008933	Sf3a1	100	84.025	Cricetulus_griseus_chok1gshd
ENSONIG00000010848	sf3a1	97	85.789	ENSCGRG00000006127	Sf3a1	100	84.025	Cricetulus_griseus_crigri
ENSONIG00000010848	sf3a1	100	91.360	ENSCSEG00000010792	sf3a1	100	91.105	Cynoglossus_semilaevis
ENSONIG00000010848	sf3a1	100	93.520	ENSCVAG00000004560	sf3a1	100	93.520	Cyprinodon_variegatus
ENSONIG00000010848	sf3a1	100	87.294	ENSDARG00000041887	sf3a1	100	90.857	Danio_rerio
ENSONIG00000010848	sf3a1	99	85.567	ENSDNOG00000010629	SF3A1	100	83.625	Dasypus_novemcinctus
ENSONIG00000010848	sf3a1	99	85.166	ENSDORG00000005613	Sf3a1	100	84.250	Dipodomys_ordii
ENSONIG00000010848	sf3a1	83	60.943	FBgn0266917	Sf3a1	99	49.522	Drosophila_melanogaster
ENSONIG00000010848	sf3a1	85	84.731	ENSETEG00000017194	SF3A1	95	85.629	Echinops_telfairi
ENSONIG00000010848	sf3a1	98	67.282	ENSEBUG00000001285	sf3a1	96	68.765	Eptatretus_burgeri
ENSONIG00000010848	sf3a1	98	85.547	ENSEASG00005010254	SF3A1	100	84.105	Equus_asinus_asinus
ENSONIG00000010848	sf3a1	98	85.547	ENSECAG00000023962	SF3A1	100	84.105	Equus_caballus
ENSONIG00000010848	sf3a1	74	88.525	ENSEEUG00000003159	SF3A1	83	88.525	Erinaceus_europaeus
ENSONIG00000010848	sf3a1	100	86.058	ENSELUG00000022578	sf3a1	100	85.298	Esox_lucius
ENSONIG00000010848	sf3a1	99	84.655	ENSFCAG00000011932	SF3A1	100	83.980	Felis_catus
ENSONIG00000010848	sf3a1	96	84.412	ENSFALG00000006944	SF3A1	100	81.967	Ficedula_albicollis
ENSONIG00000010848	sf3a1	99	85.161	ENSFDAG00000009560	SF3A1	100	84.250	Fukomys_damarensis
ENSONIG00000010848	sf3a1	100	93.139	ENSFHEG00000010866	sf3a1	100	93.901	Fundulus_heteroclitus
ENSONIG00000010848	sf3a1	100	87.134	ENSGMOG00000016024	sf3a1	100	87.023	Gadus_morhua
ENSONIG00000010848	sf3a1	96	84.941	ENSGALG00000007937	SF3A1	100	82.346	Gallus_gallus
ENSONIG00000010848	sf3a1	100	93.647	ENSGAFG00000009111	sf3a1	100	94.028	Gambusia_affinis
ENSONIG00000010848	sf3a1	100	90.518	ENSGACG00000011893	sf3a1	100	90.518	Gasterosteus_aculeatus
ENSONIG00000010848	sf3a1	96	81.950	ENSGAGG00000000762	SF3A1	99	80.764	Gopherus_agassizii
ENSONIG00000010848	sf3a1	98	85.938	ENSGGOG00000012631	SF3A1	100	84.230	Gorilla_gorilla
ENSONIG00000010848	sf3a1	100	99.236	ENSHBUG00000015795	sf3a1	100	99.236	Haplochromis_burtoni
ENSONIG00000010848	sf3a1	99	84.655	ENSHGLG00000007907	SF3A1	100	83.980	Heterocephalus_glaber_female
ENSONIG00000010848	sf3a1	99	84.655	ENSHGLG00100013799	SF3A1	100	83.980	Heterocephalus_glaber_male
ENSONIG00000010848	sf3a1	100	90.191	ENSHCOG00000015423	sf3a1	100	90.191	Hippocampus_comes
ENSONIG00000010848	sf3a1	98	85.492	ENSIPUG00000002470	sf3a1	99	86.269	Ictalurus_punctatus
ENSONIG00000010848	sf3a1	99	84.655	ENSSTOG00000013892	SF3A1	100	84.277	Ictidomys_tridecemlineatus
ENSONIG00000010848	sf3a1	99	85.161	ENSJJAG00000022566	Sf3a1	100	84.105	Jaculus_jaculus
ENSONIG00000010848	sf3a1	100	92.875	ENSKMAG00000002400	sf3a1	100	93.639	Kryptolebias_marmoratus
ENSONIG00000010848	sf3a1	100	93.631	ENSLBEG00000022974	sf3a1	100	93.631	Labrus_bergylta
ENSONIG00000010848	sf3a1	100	83.418	ENSLACG00000003565	SF3A1	100	83.418	Latimeria_chalumnae
ENSONIG00000010848	sf3a1	100	87.468	ENSLOCG00000008251	sf3a1	99	87.722	Lepisosteus_oculatus
ENSONIG00000010848	sf3a1	99	85.166	ENSLAFG00000000448	SF3A1	100	84.625	Loxodonta_africana
ENSONIG00000010848	sf3a1	98	56.066	ENSLAFG00000026032	-	97	55.273	Loxodonta_africana
ENSONIG00000010848	sf3a1	98	85.417	ENSMFAG00000031979	SF3A1	100	84.151	Macaca_fascicularis
ENSONIG00000010848	sf3a1	98	85.417	ENSMMUG00000005547	SF3A1	100	84.151	Macaca_mulatta
ENSONIG00000010848	sf3a1	98	85.547	ENSMNEG00000037229	SF3A1	100	84.105	Macaca_nemestrina
ENSONIG00000010848	sf3a1	98	85.547	ENSMLEG00000041908	SF3A1	100	84.230	Mandrillus_leucophaeus
ENSONIG00000010848	sf3a1	99	93.726	ENSMAMG00000006460	sf3a1	98	94.231	Mastacembelus_armatus
ENSONIG00000010848	sf3a1	100	99.108	ENSMZEG00005009633	sf3a1	100	99.108	Maylandia_zebra
ENSONIG00000010848	sf3a1	96	84.941	ENSMGAG00000001330	SF3A1	100	83.419	Meleagris_gallopavo
ENSONIG00000010848	sf3a1	93	81.471	ENSMAUG00000020317	Sf3a1	100	78.228	Mesocricetus_auratus
ENSONIG00000010848	sf3a1	99	84.910	ENSMICG00000010038	SF3A1	100	83.750	Microcebus_murinus
ENSONIG00000010848	sf3a1	99	84.271	ENSMOCG00000008438	Sf3a1	100	83.730	Microtus_ochrogaster
ENSONIG00000010848	sf3a1	100	91.592	ENSMMOG00000015588	sf3a1	99	91.847	Mola_mola
ENSONIG00000010848	sf3a1	99	83.548	ENSMODG00000009270	SF3A1	100	82.728	Monodelphis_domestica
ENSONIG00000010848	sf3a1	100	92.640	ENSMALG00000000148	sf3a1	100	93.782	Monopterus_albus
ENSONIG00000010848	sf3a1	99	84.319	MGP_CAROLIEiJ_G0016029	Sf3a1	99	84.051	Mus_caroli
ENSONIG00000010848	sf3a1	99	84.319	ENSMUSG00000002129	Sf3a1	99	84.051	Mus_musculus
ENSONIG00000010848	sf3a1	99	84.062	MGP_PahariEiJ_G0016862	Sf3a1	99	84.304	Mus_pahari
ENSONIG00000010848	sf3a1	99	84.319	MGP_SPRETEiJ_G0016870	Sf3a1	99	84.051	Mus_spretus
ENSONIG00000010848	sf3a1	99	84.783	ENSMPUG00000013144	SF3A1	100	84.105	Mustela_putorius_furo
ENSONIG00000010848	sf3a1	99	84.655	ENSMLUG00000002139	SF3A1	100	84.105	Myotis_lucifugus
ENSONIG00000010848	sf3a1	99	84.910	ENSNGAG00000016977	Sf3a1	100	83.980	Nannospalax_galili
ENSONIG00000010848	sf3a1	100	98.221	ENSNBRG00000016642	sf3a1	100	98.221	Neolamprologus_brichardi
ENSONIG00000010848	sf3a1	98	85.547	ENSNLEG00000003686	SF3A1	100	84.230	Nomascus_leucogenys
ENSONIG00000010848	sf3a1	94	76.495	ENSMEUG00000008741	SF3A1	100	75.457	Notamacropus_eugenii
ENSONIG00000010848	sf3a1	99	85.806	ENSOPRG00000016636	SF3A1	100	84.654	Ochotona_princeps
ENSONIG00000010848	sf3a1	98	85.436	ENSODEG00000002571	SF3A1	100	84.383	Octodon_degus
ENSONIG00000010848	sf3a1	98	85.547	ENSOCUG00000007633	SF3A1	100	84.277	Oryctolagus_cuniculus
ENSONIG00000010848	sf3a1	96	93.617	ENSORLG00000013050	sf3a1	99	93.750	Oryzias_latipes
ENSONIG00000010848	sf3a1	99	91.154	ENSORLG00020003236	sf3a1	97	91.860	Oryzias_latipes_hni
ENSONIG00000010848	sf3a1	100	93.248	ENSORLG00015017411	sf3a1	100	93.376	Oryzias_latipes_hsok
ENSONIG00000010848	sf3a1	100	94.013	ENSOMEG00000013362	sf3a1	100	94.013	Oryzias_melastigma
ENSONIG00000010848	sf3a1	99	85.548	ENSOGAG00000012931	SF3A1	100	84.625	Otolemur_garnettii
ENSONIG00000010848	sf3a1	99	83.504	ENSOARG00000006849	SF3A1	100	81.000	Ovis_aries
ENSONIG00000010848	sf3a1	98	85.156	ENSPPAG00000041790	SF3A1	100	83.396	Pan_paniscus
ENSONIG00000010848	sf3a1	99	84.655	ENSPPRG00000004391	SF3A1	100	83.980	Panthera_pardus
ENSONIG00000010848	sf3a1	99	85.032	ENSPTIG00000000844	SF3A1	99	85.677	Panthera_tigris_altaica
ENSONIG00000010848	sf3a1	98	85.938	ENSPTRG00000014240	SF3A1	100	84.230	Pan_troglodytes
ENSONIG00000010848	sf3a1	98	85.547	ENSPANG00000020772	SF3A1	100	84.230	Papio_anubis
ENSONIG00000010848	sf3a1	82	89.011	ENSPSIG00000012803	SF3A1	98	89.011	Pelodiscus_sinensis
ENSONIG00000010848	sf3a1	97	91.754	ENSPMGG00000023096	sf3a1	100	91.754	Periophthalmus_magnuspinnatus
ENSONIG00000010848	sf3a1	97	85.658	ENSPEMG00000009494	Sf3a1	100	83.855	Peromyscus_maniculatus_bairdii
ENSONIG00000010848	sf3a1	69	77.331	ENSPMAG00000007139	-	100	73.013	Petromyzon_marinus
ENSONIG00000010848	sf3a1	98	85.267	ENSPCIG00000022692	SF3A1	100	82.854	Phascolarctos_cinereus
ENSONIG00000010848	sf3a1	100	84.586	ENSPFOG00000016768	sf3a1	100	84.586	Poecilia_formosa
ENSONIG00000010848	sf3a1	100	94.536	ENSPLAG00000017268	sf3a1	100	94.917	Poecilia_latipinna
ENSONIG00000010848	sf3a1	96	94.887	ENSPMEG00000019811	sf3a1	100	94.887	Poecilia_mexicana
ENSONIG00000010848	sf3a1	100	94.282	ENSPREG00000010347	sf3a1	100	94.663	Poecilia_reticulata
ENSONIG00000010848	sf3a1	98	85.547	ENSPPYG00000011707	SF3A1	100	84.230	Pongo_abelii
ENSONIG00000010848	sf3a1	58	85.124	ENSPCAG00000003266	SF3A1	57	83.810	Procavia_capensis
ENSONIG00000010848	sf3a1	99	84.655	ENSPCOG00000026630	SF3A1	100	82.125	Propithecus_coquereli
ENSONIG00000010848	sf3a1	95	85.141	ENSPVAG00000017719	SF3A1	94	85.810	Pteropus_vampyrus
ENSONIG00000010848	sf3a1	100	98.981	ENSPNYG00000018706	sf3a1	100	98.981	Pundamilia_nyererei
ENSONIG00000010848	sf3a1	99	87.643	ENSPNAG00000003721	sf3a1	99	87.898	Pygocentrus_nattereri
ENSONIG00000010848	sf3a1	98	84.605	ENSRNOG00000005218	Sf3a1	99	83.712	Rattus_norvegicus
ENSONIG00000010848	sf3a1	98	85.547	ENSRBIG00000032167	SF3A1	100	84.230	Rhinopithecus_bieti
ENSONIG00000010848	sf3a1	98	85.547	ENSRROG00000044908	SF3A1	100	84.230	Rhinopithecus_roxellana
ENSONIG00000010848	sf3a1	94	85.850	ENSSBOG00000021960	SF3A1	98	86.527	Saimiri_boliviensis_boliviensis
ENSONIG00000010848	sf3a1	100	80.838	ENSSHAG00000003666	SF3A1	99	80.457	Sarcophilus_harrisii
ENSONIG00000010848	sf3a1	100	89.254	ENSSFOG00015004579	sf3a1	100	90.013	Scleropages_formosus
ENSONIG00000010848	sf3a1	100	91.465	ENSSMAG00000004275	sf3a1	100	91.338	Scophthalmus_maximus
ENSONIG00000010848	sf3a1	100	96.433	ENSSDUG00000022219	sf3a1	100	96.433	Seriola_dumerili
ENSONIG00000010848	sf3a1	100	96.433	ENSSLDG00000012642	sf3a1	100	96.433	Seriola_lalandi_dorsalis
ENSONIG00000010848	sf3a1	98	82.943	ENSSARG00000005960	SF3A1	99	82.581	Sorex_araneus
ENSONIG00000010848	sf3a1	97	84.395	ENSSPUG00000018863	SF3A1	100	82.419	Sphenodon_punctatus
ENSONIG00000010848	sf3a1	100	97.070	ENSSPAG00000011856	sf3a1	100	97.070	Stegastes_partitus
ENSONIG00000010848	sf3a1	99	84.910	ENSSSCG00000010002	SF3A1	100	84.230	Sus_scrofa
ENSONIG00000010848	sf3a1	96	84.848	ENSTGUG00000010547	SF3A1	99	84.355	Taeniopygia_guttata
ENSONIG00000010848	sf3a1	100	89.809	ENSTRUG00000006118	sf3a1	100	89.682	Takifugu_rubripes
ENSONIG00000010848	sf3a1	64	88.433	ENSTNIG00000005713	sf3a1	89	88.496	Tetraodon_nigroviridis
ENSONIG00000010848	sf3a1	99	78.133	ENSTBEG00000012771	SF3A1	100	77.484	Tupaia_belangeri
ENSONIG00000010848	sf3a1	99	84.802	ENSTTRG00000001535	SF3A1	100	84.125	Tursiops_truncatus
ENSONIG00000010848	sf3a1	99	82.620	ENSUAMG00000006750	SF3A1	99	83.249	Ursus_americanus
ENSONIG00000010848	sf3a1	99	85.290	ENSUMAG00000016665	SF3A1	99	84.949	Ursus_maritimus
ENSONIG00000010848	sf3a1	99	84.783	ENSVVUG00000003075	SF3A1	100	84.105	Vulpes_vulpes
ENSONIG00000010848	sf3a1	100	78.921	ENSXETG00000016144	sf3a1	96	84.615	Xenopus_tropicalis
ENSONIG00000010848	sf3a1	100	93.647	ENSXCOG00000015653	sf3a1	100	94.028	Xiphophorus_couchianus
ENSONIG00000010848	sf3a1	100	93.901	ENSXMAG00000002753	sf3a1	100	94.282	Xiphophorus_maculatus