EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000011063 (Gene tree)
Gene ID: 100690171
Gene Symbol: usb1
Alias: -
Full Name: U6 snRNA biogenesis 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 4612 bases
Position: chrGL831139.1:5516735-5521346
Accession: ZDB-GENE-040801-197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000013927	HVSL	PF09749.9	4.6e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000013937	-	834	-	ENSONIP00000013927	278 (aa)	-	I3JYI2

Gene Model

Click here to download ENSONIG00000011063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000011063's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000011063	usb1	81	53.744	ENSG00000103005	USB1	100	54.206	Homo_sapiens
ENSONIG00000011063	usb1	100	76.071	ENSAPOG00000011942	usb1	99	76.071	Acanthochromis_polyacanthus
ENSONIG00000011063	usb1	81	54.185	ENSAMEG00000017205	USB1	98	50.179	Ailuropoda_melanoleuca
ENSONIG00000011063	usb1	85	84.322	ENSACIG00000012234	usb1	99	76.596	Amphilophus_citrinellus
ENSONIG00000011063	usb1	100	77.224	ENSAOCG00000014831	usb1	99	78.723	Amphiprion_ocellaris
ENSONIG00000011063	usb1	100	76.512	ENSAPEG00000000296	usb1	99	78.014	Amphiprion_percula
ENSONIG00000011063	usb1	100	77.660	ENSATEG00000009348	usb1	99	77.660	Anabas_testudineus
ENSONIG00000011063	usb1	80	56.889	ENSAPLG00000002756	USB1	99	56.889	Anas_platyrhynchos
ENSONIG00000011063	usb1	81	50.877	ENSACAG00000015481	USB1	99	50.877	Anolis_carolinensis
ENSONIG00000011063	usb1	81	53.304	ENSANAG00000035640	USB1	98	47.872	Aotus_nancymaae
ENSONIG00000011063	usb1	100	91.429	ENSACLG00000020586	usb1	99	95.000	Astatotilapia_calliptera
ENSONIG00000011063	usb1	89	58.167	ENSAMXG00000040146	usb1	95	55.208	Astyanax_mexicanus
ENSONIG00000011063	usb1	99	48.571	ENSBTAG00000015758	USB1	98	48.571	Bos_taurus
ENSONIG00000011063	usb1	81	53.304	ENSCJAG00000011733	USB1	98	47.872	Callithrix_jacchus
ENSONIG00000011063	usb1	81	53.097	ENSCAFG00000008556	USB1	71	49.104	Canis_familiaris
ENSONIG00000011063	usb1	99	48.014	ENSCAFG00020009263	USB1	98	48.014	Canis_lupus_dingo
ENSONIG00000011063	usb1	99	49.104	ENSCHIG00000024290	USB1	98	49.104	Capra_hircus
ENSONIG00000011063	usb1	81	52.423	ENSTSYG00000006997	USB1	98	49.104	Carlito_syrichta
ENSONIG00000011063	usb1	80	43.750	ENSCAPG00000009057	USB1	96	43.750	Cavia_aperea
ENSONIG00000011063	usb1	99	48.029	ENSCPOG00000014325	USB1	98	48.029	Cavia_porcellus
ENSONIG00000011063	usb1	81	53.744	ENSCCAG00000022132	USB1	98	48.227	Cebus_capucinus
ENSONIG00000011063	usb1	81	53.304	ENSCATG00000032174	USB1	98	47.872	Cercocebus_atys
ENSONIG00000011063	usb1	62	54.335	ENSCLAG00000007363	USB1	98	54.335	Chinchilla_lanigera
ENSONIG00000011063	usb1	81	53.304	ENSCSAG00000004783	USB1	98	47.872	Chlorocebus_sabaeus
ENSONIG00000011063	usb1	81	55.752	ENSCPBG00000026943	USB1	98	50.542	Chrysemys_picta_bellii
ENSONIG00000011063	usb1	81	30.043	ENSCSAVG00000000894	-	84	30.043	Ciona_savignyi
ENSONIG00000011063	usb1	81	52.655	ENSCANG00000037135	USB1	98	46.975	Colobus_angolensis_palliatus
ENSONIG00000011063	usb1	99	50.538	ENSCGRG00001011243	USB1	98	50.538	Cricetulus_griseus_chok1gshd
ENSONIG00000011063	usb1	99	50.538	ENSCGRG00000013252	USB1	98	50.538	Cricetulus_griseus_crigri
ENSONIG00000011063	usb1	100	65.714	ENSCSEG00000013881	usb1	99	65.714	Cynoglossus_semilaevis
ENSONIG00000011063	usb1	80	70.044	ENSCVAG00000009252	usb1	97	70.044	Cyprinodon_variegatus
ENSONIG00000011063	usb1	87	60.905	ENSDARG00000003841	usb1	100	56.272	Danio_rerio
ENSONIG00000011063	usb1	85	52.119	ENSDORG00000001888	Usb1	98	50.896	Dipodomys_ordii
ENSONIG00000011063	usb1	76	39.352	FBgn0037713	CG16790	81	39.352	Drosophila_melanogaster
ENSONIG00000011063	usb1	99	41.696	ENSETEG00000019682	USB1	98	41.696	Echinops_telfairi
ENSONIG00000011063	usb1	94	40.071	ENSEBUG00000005889	usb1	99	39.159	Eptatretus_burgeri
ENSONIG00000011063	usb1	99	48.921	ENSEASG00005005484	USB1	98	48.921	Equus_asinus_asinus
ENSONIG00000011063	usb1	99	48.375	ENSECAG00000019493	USB1	89	48.375	Equus_caballus
ENSONIG00000011063	usb1	62	50.289	ENSEEUG00000000154	USB1	65	50.289	Erinaceus_europaeus
ENSONIG00000011063	usb1	90	65.079	ENSELUG00000010974	usb1	99	62.724	Esox_lucius
ENSONIG00000011063	usb1	84	51.709	ENSFCAG00000002693	USB1	98	48.043	Felis_catus
ENSONIG00000011063	usb1	82	52.174	ENSFALG00000006876	USB1	98	48.014	Ficedula_albicollis
ENSONIG00000011063	usb1	99	48.746	ENSFDAG00000010052	USB1	98	48.746	Fukomys_damarensis
ENSONIG00000011063	usb1	88	64.000	ENSFHEG00000012334	usb1	98	65.200	Fundulus_heteroclitus
ENSONIG00000011063	usb1	80	73.423	ENSGMOG00000004228	usb1	99	73.423	Gadus_morhua
ENSONIG00000011063	usb1	79	56.054	ENSGALG00000035604	USB1	98	49.281	Gallus_gallus
ENSONIG00000011063	usb1	100	70.922	ENSGAFG00000021890	usb1	99	70.922	Gambusia_affinis
ENSONIG00000011063	usb1	89	74.800	ENSGACG00000003257	usb1	99	71.174	Gasterosteus_aculeatus
ENSONIG00000011063	usb1	99	51.079	ENSGAGG00000022572	USB1	98	51.079	Gopherus_agassizii
ENSONIG00000011063	usb1	81	53.744	ENSGGOG00000017147	USB1	98	48.227	Gorilla_gorilla
ENSONIG00000011063	usb1	100	96.416	ENSHBUG00000009823	usb1	99	96.416	Haplochromis_burtoni
ENSONIG00000011063	usb1	99	47.653	ENSHGLG00000016078	USB1	96	47.653	Heterocephalus_glaber_female
ENSONIG00000011063	usb1	99	47.653	ENSHGLG00100005562	USB1	96	47.653	Heterocephalus_glaber_male
ENSONIG00000011063	usb1	78	74.312	ENSHCOG00000015633	usb1	99	65.591	Hippocampus_comes
ENSONIG00000011063	usb1	100	54.861	ENSIPUG00000008601	usb1	100	54.861	Ictalurus_punctatus
ENSONIG00000011063	usb1	99	47.703	ENSSTOG00000007548	USB1	98	49.648	Ictidomys_tridecemlineatus
ENSONIG00000011063	usb1	99	50.000	ENSJJAG00000021859	Usb1	98	50.000	Jaculus_jaculus
ENSONIG00000011063	usb1	100	71.071	ENSKMAG00000007200	usb1	99	71.429	Kryptolebias_marmoratus
ENSONIG00000011063	usb1	89	70.916	ENSLBEG00000008452	usb1	86	68.364	Labrus_bergylta
ENSONIG00000011063	usb1	85	48.739	ENSLACG00000000105	USB1	86	51.004	Latimeria_chalumnae
ENSONIG00000011063	usb1	99	53.737	ENSLOCG00000000465	usb1	99	53.737	Lepisosteus_oculatus
ENSONIG00000011063	usb1	99	39.649	ENSLAFG00000002267	USB1	98	39.649	Loxodonta_africana
ENSONIG00000011063	usb1	81	53.304	ENSMFAG00000003926	USB1	98	47.872	Macaca_fascicularis
ENSONIG00000011063	usb1	81	53.304	ENSMMUG00000022669	USB1	98	47.872	Macaca_mulatta
ENSONIG00000011063	usb1	81	52.863	ENSMNEG00000042487	USB1	98	47.518	Macaca_nemestrina
ENSONIG00000011063	usb1	81	53.304	ENSMLEG00000028756	USB1	98	47.872	Mandrillus_leucophaeus
ENSONIG00000011063	usb1	100	74.460	ENSMAMG00000015092	usb1	99	74.460	Mastacembelus_armatus
ENSONIG00000011063	usb1	100	91.756	ENSMZEG00005010008	usb1	99	95.341	Maylandia_zebra
ENSONIG00000011063	usb1	99	50.179	ENSMAUG00000007832	Usb1	98	50.179	Mesocricetus_auratus
ENSONIG00000011063	usb1	81	53.744	ENSMICG00000004900	USB1	98	48.070	Microcebus_murinus
ENSONIG00000011063	usb1	99	51.439	ENSMOCG00000022647	Usb1	98	51.439	Microtus_ochrogaster
ENSONIG00000011063	usb1	81	75.893	ENSMMOG00000000490	usb1	99	65.827	Mola_mola
ENSONIG00000011063	usb1	87	48.606	ENSMODG00000014067	USB1	99	48.057	Monodelphis_domestica
ENSONIG00000011063	usb1	100	72.954	ENSMALG00000005930	usb1	99	75.177	Monopterus_albus
ENSONIG00000011063	usb1	99	49.462	MGP_CAROLIEiJ_G0031421	Usb1	99	50.893	Mus_caroli
ENSONIG00000011063	usb1	99	49.821	ENSMUSG00000031792	Usb1	99	50.893	Mus_musculus
ENSONIG00000011063	usb1	81	55.507	MGP_PahariEiJ_G0023019	Usb1	100	52.991	Mus_pahari
ENSONIG00000011063	usb1	99	49.821	MGP_SPRETEiJ_G0032540	Usb1	98	50.179	Mus_spretus
ENSONIG00000011063	usb1	83	51.502	ENSMPUG00000004684	USB1	94	48.746	Mustela_putorius_furo
ENSONIG00000011063	usb1	81	54.185	ENSMLUG00000007400	USB1	98	54.185	Myotis_lucifugus
ENSONIG00000011063	usb1	99	50.719	ENSNGAG00000009703	Usb1	98	51.971	Nannospalax_galili
ENSONIG00000011063	usb1	100	83.513	ENSNBRG00000008747	usb1	99	91.549	Neolamprologus_brichardi
ENSONIG00000011063	usb1	76	53.774	ENSNLEG00000003340	USB1	96	48.669	Nomascus_leucogenys
ENSONIG00000011063	usb1	99	49.458	ENSODEG00000016214	USB1	98	49.458	Octodon_degus
ENSONIG00000011063	usb1	80	53.778	ENSOANG00000012118	USB1	94	53.778	Ornithorhynchus_anatinus
ENSONIG00000011063	usb1	91	73.047	ENSORLG00000012479	usb1	99	70.357	Oryzias_latipes
ENSONIG00000011063	usb1	88	74.286	ENSORLG00020018671	usb1	99	70.144	Oryzias_latipes_hni
ENSONIG00000011063	usb1	91	73.047	ENSORLG00015009679	usb1	99	70.144	Oryzias_latipes_hsok
ENSONIG00000011063	usb1	100	71.942	ENSOMEG00000012930	usb1	99	71.942	Oryzias_melastigma
ENSONIG00000011063	usb1	81	49.780	ENSOGAG00000003273	USB1	98	45.263	Otolemur_garnettii
ENSONIG00000011063	usb1	81	53.304	ENSOARG00000001107	USB1	87	53.304	Ovis_aries
ENSONIG00000011063	usb1	81	54.185	ENSPPAG00000042137	USB1	98	48.582	Pan_paniscus
ENSONIG00000011063	usb1	84	51.282	ENSPPRG00000024797	USB1	98	47.687	Panthera_pardus
ENSONIG00000011063	usb1	84	50.855	ENSPTIG00000007506	USB1	98	47.331	Panthera_tigris_altaica
ENSONIG00000011063	usb1	81	50.220	ENSPTRG00000008172	USB1	100	54.206	Pan_troglodytes
ENSONIG00000011063	usb1	81	53.304	ENSPANG00000025138	USB1	98	47.872	Papio_anubis
ENSONIG00000011063	usb1	99	55.743	ENSPKIG00000015109	usb1	99	56.757	Paramormyrops_kingsleyae
ENSONIG00000011063	usb1	80	45.291	ENSPSIG00000004305	USB1	100	45.291	Pelodiscus_sinensis
ENSONIG00000011063	usb1	80	68.919	ENSPMGG00000017725	usb1	98	58.845	Periophthalmus_magnuspinnatus
ENSONIG00000011063	usb1	99	48.399	ENSPEMG00000016183	Usb1	98	50.178	Peromyscus_maniculatus_bairdii
ENSONIG00000011063	usb1	80	48.889	ENSPMAG00000000462	usb1	95	48.889	Petromyzon_marinus
ENSONIG00000011063	usb1	100	70.922	ENSPFOG00000011130	usb1	99	70.922	Poecilia_formosa
ENSONIG00000011063	usb1	100	70.922	ENSPLAG00000009820	usb1	99	70.922	Poecilia_latipinna
ENSONIG00000011063	usb1	100	71.277	ENSPMEG00000006402	usb1	99	71.277	Poecilia_mexicana
ENSONIG00000011063	usb1	88	69.600	ENSPREG00000001047	usb1	99	70.800	Poecilia_reticulata
ENSONIG00000011063	usb1	76	50.467	ENSPPYG00000007401	USB1	98	45.353	Pongo_abelii
ENSONIG00000011063	usb1	81	52.863	ENSPCOG00000022612	USB1	98	48.746	Propithecus_coquereli
ENSONIG00000011063	usb1	99	47.312	ENSPVAG00000004613	USB1	98	47.312	Pteropus_vampyrus
ENSONIG00000011063	usb1	100	96.057	ENSPNYG00000022262	usb1	99	96.057	Pundamilia_nyererei
ENSONIG00000011063	usb1	88	59.184	ENSPNAG00000011736	usb1	100	53.041	Pygocentrus_nattereri
ENSONIG00000011063	usb1	99	50.179	ENSRNOG00000013216	Usb1	98	50.179	Rattus_norvegicus
ENSONIG00000011063	usb1	81	50.220	ENSRBIG00000044466	USB1	100	53.738	Rhinopithecus_bieti
ENSONIG00000011063	usb1	81	53.304	ENSRROG00000029211	USB1	98	47.872	Rhinopithecus_roxellana
ENSONIG00000011063	usb1	81	53.304	ENSSBOG00000029362	USB1	98	47.518	Saimiri_boliviensis_boliviensis
ENSONIG00000011063	usb1	78	51.152	ENSSHAG00000006993	USB1	100	47.727	Sarcophilus_harrisii
ENSONIG00000011063	usb1	89	59.328	ENSSFOG00015023663	usb1	91	58.419	Scleropages_formosus
ENSONIG00000011063	usb1	100	69.492	ENSSMAG00000015834	usb1	99	69.492	Scophthalmus_maximus
ENSONIG00000011063	usb1	80	81.166	ENSSDUG00000002949	usb1	99	71.583	Seriola_dumerili
ENSONIG00000011063	usb1	89	80.080	ENSSLDG00000014174	usb1	99	75.887	Seriola_lalandi_dorsalis
ENSONIG00000011063	usb1	77	52.804	ENSSPUG00000006741	USB1	100	52.804	Sphenodon_punctatus
ENSONIG00000011063	usb1	100	75.704	ENSSPAG00000007484	usb1	99	76.056	Stegastes_partitus
ENSONIG00000011063	usb1	99	47.122	ENSSSCG00000002807	USB1	98	48.746	Sus_scrofa
ENSONIG00000011063	usb1	76	54.028	ENSTGUG00000004792	USB1	88	52.174	Taeniopygia_guttata
ENSONIG00000011063	usb1	100	69.065	ENSTRUG00000021069	usb1	99	69.065	Takifugu_rubripes
ENSONIG00000011063	usb1	100	57.914	ENSTNIG00000000626	usb1	98	57.914	Tetraodon_nigroviridis
ENSONIG00000011063	usb1	80	38.393	ENSTBEG00000001507	USB1	97	38.393	Tupaia_belangeri
ENSONIG00000011063	usb1	81	54.185	ENSUAMG00000016823	USB1	98	50.179	Ursus_americanus
ENSONIG00000011063	usb1	77	54.206	ENSUMAG00000021369	USB1	100	54.206	Ursus_maritimus
ENSONIG00000011063	usb1	99	48.561	ENSVVUG00000023700	USB1	87	53.097	Vulpes_vulpes
ENSONIG00000011063	usb1	77	55.300	ENSXETG00000013795	usb1	99	48.561	Xenopus_tropicalis
ENSONIG00000011063	usb1	89	73.810	ENSXMAG00000024687	usb1	81	70.518	Xiphophorus_maculatus