EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000011080 (Gene tree)
Gene ID: 100695937
Gene Symbol: srek1
Alias: -
Full Name: splicing regulatory glutamine/lysine-rich protein 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 8120 bases
Position: chrGL831211.1:446438-454557
Accession: ZDB-GENE-040801-132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000013947	RRM_1	PF00076.22	1e-21	1	2
ENSONIP00000013947	RRM_1	PF00076.22	1e-21	2	2
ENSONIP00000013948	RRM_1	PF00076.22	1.6e-21	1	2
ENSONIP00000013948	RRM_1	PF00076.22	1.6e-21	2	2
ENSONIP00000013949	RRM_1	PF00076.22	2.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000013957	-	1475	-	ENSONIP00000013947	425 (aa)	-	I3JYK2
ENSONIT00000013958	-	1538	-	ENSONIP00000013948	499 (aa)	-	I3JYK3
ENSONIT00000013959	-	1309	-	ENSONIP00000013949	353 (aa)	-	I3JYK4

Gene Model

Click here to download ENSONIG00000011080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000011080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000011080	srek1	66	44.803	ENSG00000116754	SRSF11	67	69.767	Homo_sapiens
ENSONIG00000011080	srek1	65	80.851	ENSG00000153914	SREK1	85	85.882	Homo_sapiens
ENSONIG00000011080	srek1	96	88.496	ENSAPOG00000023618	srek1	97	72.381	Acanthochromis_polyacanthus
ENSONIG00000011080	srek1	55	42.960	ENSAPOG00000004488	-	93	62.136	Acanthochromis_polyacanthus
ENSONIG00000011080	srek1	65	80.851	ENSAMEG00000011327	SREK1	82	50.125	Ailuropoda_melanoleuca
ENSONIG00000011080	srek1	51	87.568	ENSACIG00000015041	srek1	96	90.000	Amphilophus_citrinellus
ENSONIG00000011080	srek1	96	89.086	ENSAOCG00000024379	srek1	97	72.554	Amphiprion_ocellaris
ENSONIG00000011080	srek1	65	42.446	ENSAPEG00000003142	SRSF11	85	65.854	Amphiprion_percula
ENSONIG00000011080	srek1	66	43.772	ENSAPEG00000003619	SRSF11	93	62.136	Amphiprion_percula
ENSONIG00000011080	srek1	96	84.661	ENSATEG00000009450	srek1	83	81.040	Anabas_testudineus
ENSONIG00000011080	srek1	64	42.336	ENSATEG00000011691	srsf11	75	66.667	Anabas_testudineus
ENSONIG00000011080	srek1	72	31.801	ENSATEG00000007534	-	93	62.136	Anabas_testudineus
ENSONIG00000011080	srek1	90	65.729	ENSAPLG00000003948	-	70	81.495	Anas_platyrhynchos
ENSONIG00000011080	srek1	73	76.825	ENSANAG00000031358	SREK1	85	85.882	Aotus_nancymaae
ENSONIG00000011080	srek1	66	95.406	ENSACLG00000026754	srek1	97	95.406	Astatotilapia_calliptera
ENSONIG00000011080	srek1	67	84.642	ENSAMXG00000043877	srek1	58	84.375	Astyanax_mexicanus
ENSONIG00000011080	srek1	65	81.206	ENSBTAG00000007321	SREK1	85	85.882	Bos_taurus
ENSONIG00000011080	srek1	65	43.525	ENSCJAG00000017704	SRSF11	66	45.985	Callithrix_jacchus
ENSONIG00000011080	srek1	76	74.772	ENSCJAG00000015950	SREK1	85	85.882	Callithrix_jacchus
ENSONIG00000011080	srek1	65	80.851	ENSCAFG00000007560	SREK1	51	60.563	Canis_familiaris
ENSONIG00000011080	srek1	64	44.891	ENSCHIG00000025295	SRSF11	75	67.416	Capra_hircus
ENSONIG00000011080	srek1	65	81.206	ENSTSYG00000036957	SREK1	85	85.882	Carlito_syrichta
ENSONIG00000011080	srek1	66	41.935	ENSTSYG00000033270	-	67	66.316	Carlito_syrichta
ENSONIG00000011080	srek1	63	42.537	ENSCPOG00000009554	SRSF11	78	36.652	Cavia_porcellus
ENSONIG00000011080	srek1	65	80.000	ENSCPOG00000008925	SREK1	52	80.212	Cavia_porcellus
ENSONIG00000011080	srek1	65	80.851	ENSCCAG00000020591	SREK1	85	85.882	Cebus_capucinus
ENSONIG00000011080	srek1	65	80.851	ENSCATG00000031482	SREK1	85	85.882	Cercocebus_atys
ENSONIG00000011080	srek1	66	80.282	ENSCPBG00000026866	SREK1	84	80.714	Chrysemys_picta_bellii
ENSONIG00000011080	srek1	65	48.264	ENSCING00000022892	-	70	48.951	Ciona_intestinalis
ENSONIG00000011080	srek1	65	80.851	ENSCANG00000030421	SREK1	85	85.882	Colobus_angolensis_palliatus
ENSONIG00000011080	srek1	66	41.577	ENSCSEG00000008551	srsf11	63	31.856	Cynoglossus_semilaevis
ENSONIG00000011080	srek1	74	37.950	ENSCSEG00000010721	-	94	38.610	Cynoglossus_semilaevis
ENSONIG00000011080	srek1	64	44.853	ENSCVAG00000006934	-	99	37.523	Cyprinodon_variegatus
ENSONIG00000011080	srek1	50	90.857	ENSCVAG00000002411	srek1	85	91.908	Cyprinodon_variegatus
ENSONIG00000011080	srek1	95	56.812	ENSDARG00000009764	srek1	89	65.208	Danio_rerio
ENSONIG00000011080	srek1	66	44.444	ENSDNOG00000008603	SRSF11	79	34.821	Dasypus_novemcinctus
ENSONIG00000011080	srek1	64	40.942	FBgn0024285	Srp54	52	40.511	Drosophila_melanogaster
ENSONIG00000011080	srek1	64	44.891	ENSEASG00005007847	SRSF11	78	67.416	Equus_asinus_asinus
ENSONIG00000011080	srek1	92	63.913	ENSELUG00000008230	srek1	55	81.081	Esox_lucius
ENSONIG00000011080	srek1	75	38.147	ENSELUG00000021268	-	81	33.875	Esox_lucius
ENSONIG00000011080	srek1	87	83.495	ENSFHEG00000020971	srek1	98	67.717	Fundulus_heteroclitus
ENSONIG00000011080	srek1	65	44.086	ENSFHEG00000003732	SRSF11	65	30.601	Fundulus_heteroclitus
ENSONIG00000011080	srek1	66	44.444	ENSGMOG00000002255	-	65	34.722	Gadus_morhua
ENSONIG00000011080	srek1	54	80.000	ENSGALG00000043541	SREK1	93	80.000	Gallus_gallus
ENSONIG00000011080	srek1	55	42.599	ENSGAFG00000021415	SRSF11	56	36.682	Gambusia_affinis
ENSONIG00000011080	srek1	83	70.523	ENSGAGG00000006087	SREK1	62	88.889	Gopherus_agassizii
ENSONIG00000011080	srek1	65	80.851	ENSGGOG00000004737	SREK1	85	85.882	Gorilla_gorilla
ENSONIG00000011080	srek1	50	93.258	ENSHBUG00000007057	srek1	97	93.258	Haplochromis_burtoni
ENSONIG00000011080	srek1	66	44.444	ENSHGLG00000008682	SRSF11	64	38.386	Heterocephalus_glaber_female
ENSONIG00000011080	srek1	66	43.972	ENSHGLG00100018382	SRSF11	69	37.745	Heterocephalus_glaber_male
ENSONIG00000011080	srek1	60	73.585	ENSHCOG00000017240	SREK1	53	84.971	Hippocampus_comes
ENSONIG00000011080	srek1	99	66.406	ENSIPUG00000016851	srek1	54	85.305	Ictalurus_punctatus
ENSONIG00000011080	srek1	65	80.000	ENSSTOG00000008850	SREK1	85	85.882	Ictidomys_tridecemlineatus
ENSONIG00000011080	srek1	67	39.863	ENSKMAG00000009775	srsf11	56	34.954	Kryptolebias_marmoratus
ENSONIG00000011080	srek1	55	41.404	ENSKMAG00000005868	-	99	36.754	Kryptolebias_marmoratus
ENSONIG00000011080	srek1	65	41.727	ENSLBEG00000024167	srsf11	84	65.854	Labrus_bergylta
ENSONIG00000011080	srek1	53	85.484	ENSLBEG00000022980	srek1	90	90.286	Labrus_bergylta
ENSONIG00000011080	srek1	66	85.512	ENSLOCG00000010547	srek1	66	85.866	Lepisosteus_oculatus
ENSONIG00000011080	srek1	65	80.000	ENSLAFG00000013853	SREK1	60	60.791	Loxodonta_africana
ENSONIG00000011080	srek1	65	80.851	ENSMFAG00000039823	SREK1	85	85.882	Macaca_fascicularis
ENSONIG00000011080	srek1	69	76.923	ENSMMUG00000014586	SREK1	79	86.047	Macaca_mulatta
ENSONIG00000011080	srek1	65	80.851	ENSMNEG00000030723	SREK1	85	85.882	Macaca_nemestrina
ENSONIG00000011080	srek1	65	80.851	ENSMLEG00000039078	SREK1	85	85.882	Mandrillus_leucophaeus
ENSONIG00000011080	srek1	81	37.101	ENSMAMG00000015002	-	93	62.136	Mastacembelus_armatus
ENSONIG00000011080	srek1	50	93.258	ENSMZEG00005005719	srek1	97	93.258	Maylandia_zebra
ENSONIG00000011080	srek1	56	60.000	ENSMGAG00000002047	SREK1	69	65.909	Meleagris_gallopavo
ENSONIG00000011080	srek1	65	79.649	ENSMAUG00000010066	-	89	54.489	Mesocricetus_auratus
ENSONIG00000011080	srek1	65	44.964	ENSMAUG00000008832	Srsf11	79	36.034	Mesocricetus_auratus
ENSONIG00000011080	srek1	66	80.282	ENSMICG00000034959	SREK1	85	85.882	Microcebus_murinus
ENSONIG00000011080	srek1	64	44.891	ENSMICG00000005537	SRSF11	67	45.620	Microcebus_murinus
ENSONIG00000011080	srek1	65	80.000	ENSMOCG00000001536	-	58	75.543	Microtus_ochrogaster
ENSONIG00000011080	srek1	65	43.165	ENSMMOG00000016751	-	92	58.559	Mola_mola
ENSONIG00000011080	srek1	50	91.429	ENSMMOG00000008409	srek1	90	92.486	Mola_mola
ENSONIG00000011080	srek1	97	84.783	ENSMALG00000017086	srek1	98	93.103	Monopterus_albus
ENSONIG00000011080	srek1	65	44.964	MGP_CAROLIEiJ_G0025767	Srsf11	86	69.767	Mus_caroli
ENSONIG00000011080	srek1	65	44.964	ENSMUSG00000055436	Srsf11	85	69.767	Mus_musculus
ENSONIG00000011080	srek1	65	44.964	MGP_PahariEiJ_G0027217	Srsf11	86	69.767	Mus_pahari
ENSONIG00000011080	srek1	65	44.964	MGP_SPRETEiJ_G0026719	Srsf11	86	69.767	Mus_spretus
ENSONIG00000011080	srek1	66	43.929	ENSMLUG00000026338	-	61	38.350	Myotis_lucifugus
ENSONIG00000011080	srek1	50	90.556	ENSNBRG00000010718	srek1	97	91.111	Neolamprologus_brichardi
ENSONIG00000011080	srek1	65	80.851	ENSNLEG00000003827	SREK1	85	85.882	Nomascus_leucogenys
ENSONIG00000011080	srek1	65	80.496	ENSOPRG00000012111	SREK1	52	79.930	Ochotona_princeps
ENSONIG00000011080	srek1	57	79.600	ENSOANG00000005029	SREK1	54	80.894	Ornithorhynchus_anatinus
ENSONIG00000011080	srek1	66	43.214	ENSOCUG00000025440	-	63	40.268	Oryctolagus_cuniculus
ENSONIG00000011080	srek1	66	42.857	ENSOCUG00000024114	-	52	31.965	Oryctolagus_cuniculus
ENSONIG00000011080	srek1	55	45.290	ENSORLG00020009393	-	89	59.804	Oryzias_latipes_hni
ENSONIG00000011080	srek1	55	45.290	ENSORLG00015009374	-	89	59.804	Oryzias_latipes_hsok
ENSONIG00000011080	srek1	53	86.082	ENSORLG00015020471	srek1	94	89.071	Oryzias_latipes_hsok
ENSONIG00000011080	srek1	99	68.737	ENSOMEG00000015817	srek1	87	75.362	Oryzias_melastigma
ENSONIG00000011080	srek1	65	44.245	ENSOMEG00000022450	srsf11	65	33.333	Oryzias_melastigma
ENSONIG00000011080	srek1	79	37.574	ENSOMEG00000006172	-	64	38.072	Oryzias_melastigma
ENSONIG00000011080	srek1	64	81.295	ENSPPAG00000031605	SREK1	91	78.531	Pan_paniscus
ENSONIG00000011080	srek1	65	80.142	ENSPPRG00000024617	SREK1	85	83.529	Panthera_pardus
ENSONIG00000011080	srek1	65	80.142	ENSPTIG00000006608	SREK1	85	83.529	Panthera_tigris_altaica
ENSONIG00000011080	srek1	66	44.803	ENSPTRG00000000852	SRSF11	67	45.985	Pan_troglodytes
ENSONIG00000011080	srek1	65	80.851	ENSPTRG00000016936	SREK1	85	85.882	Pan_troglodytes
ENSONIG00000011080	srek1	65	80.851	ENSPANG00000008953	SREK1	85	85.882	Papio_anubis
ENSONIG00000011080	srek1	88	70.896	ENSPKIG00000025563	srek1	54	87.900	Paramormyrops_kingsleyae
ENSONIG00000011080	srek1	50	83.429	ENSPMGG00000017031	srek1	98	84.393	Periophthalmus_magnuspinnatus
ENSONIG00000011080	srek1	65	80.000	ENSPEMG00000024051	-	59	75.543	Peromyscus_maniculatus_bairdii
ENSONIG00000011080	srek1	65	44.964	ENSPEMG00000014288	Srsf11	61	32.796	Peromyscus_maniculatus_bairdii
ENSONIG00000011080	srek1	55	44.765	ENSPFOG00000014895	-	63	37.288	Poecilia_formosa
ENSONIG00000011080	srek1	56	31.818	ENSPLAG00000015578	srsf11	80	38.018	Poecilia_latipinna
ENSONIG00000011080	srek1	50	93.714	ENSPLAG00000008827	srek1	99	94.798	Poecilia_latipinna
ENSONIG00000011080	srek1	81	75.305	ENSPMEG00000006831	srek1	96	62.780	Poecilia_mexicana
ENSONIG00000011080	srek1	55	44.765	ENSPMEG00000023453	-	66	61.053	Poecilia_mexicana
ENSONIG00000011080	srek1	80	34.604	ENSPREG00000009065	SRSF11	63	37.288	Poecilia_reticulata
ENSONIG00000011080	srek1	64	44.485	ENSPCOG00000025365	SRSF11	78	40.995	Propithecus_coquereli
ENSONIG00000011080	srek1	66	80.282	ENSPCOG00000026230	SREK1	85	85.882	Propithecus_coquereli
ENSONIG00000011080	srek1	74	96.241	ENSPNYG00000007160	srek1	100	87.464	Pundamilia_nyererei
ENSONIG00000011080	srek1	99	64.038	ENSPNAG00000004328	srek1	98	62.500	Pygocentrus_nattereri
ENSONIG00000011080	srek1	65	80.851	ENSRBIG00000033818	SREK1	85	85.882	Rhinopithecus_bieti
ENSONIG00000011080	srek1	66	44.803	ENSRBIG00000042971	SRSF11	75	63.918	Rhinopithecus_bieti
ENSONIG00000011080	srek1	65	80.851	ENSRROG00000017210	SREK1	85	85.882	Rhinopithecus_roxellana
ENSONIG00000011080	srek1	65	81.004	ENSSBOG00000031230	SREK1	85	85.882	Saimiri_boliviensis_boliviensis
ENSONIG00000011080	srek1	66	44.803	ENSSBOG00000033461	SRSF11	75	63.918	Saimiri_boliviensis_boliviensis
ENSONIG00000011080	srek1	96	62.393	ENSSFOG00015004995	srek1	72	87.189	Scleropages_formosus
ENSONIG00000011080	srek1	65	41.935	ENSSMAG00000019897	-	56	36.697	Scophthalmus_maximus
ENSONIG00000011080	srek1	97	82.578	ENSSMAG00000011808	srek1	88	79.187	Scophthalmus_maximus
ENSONIG00000011080	srek1	65	42.806	ENSSDUG00000018738	-	65	35.422	Seriola_dumerili
ENSONIG00000011080	srek1	74	35.246	ENSSLDG00000012105	-	93	62.136	Seriola_lalandi_dorsalis
ENSONIG00000011080	srek1	64	80.216	ENSSPUG00000016553	SREK1	89	81.004	Sphenodon_punctatus
ENSONIG00000011080	srek1	50	92.655	ENSSPAG00000022298	srek1	99	93.714	Stegastes_partitus
ENSONIG00000011080	srek1	55	43.321	ENSSPAG00000016483	-	66	68.293	Stegastes_partitus
ENSONIG00000011080	srek1	50	82.682	ENSTRUG00000002960	srek1	97	84.000	Takifugu_rubripes
ENSONIG00000011080	srek1	97	76.156	ENSTNIG00000013463	srek1	83	90.545	Tetraodon_nigroviridis
ENSONIG00000011080	srek1	66	74.837	ENSXETG00000021460	srek1	61	75.000	Xenopus_tropicalis
ENSONIG00000011080	srek1	50	88.827	ENSXCOG00000017793	srek1	96	89.773	Xiphophorus_couchianus
ENSONIG00000011080	srek1	80	34.604	ENSXMAG00000019180	SRSF11	63	61.053	Xiphophorus_maculatus