EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000011269 (Gene tree)
Gene ID: 100703995
Gene Symbol: ptcd2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 3654 bases
Position: chrGL831211.1:2814866-2818519
Accession: ZDB-GENE-050417-82
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000014183	MRP-S27	PF10037.9	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000014193	-	2236	-	ENSONIP00000014183	341 (aa)	-	I3JZ88

Gene Model

Click here to download ENSONIG00000011269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000011269's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000011269	ptcd2	91	44.062	ENSG00000049883	PTCD2	93	44.966	Homo_sapiens
ENSONIG00000011269	ptcd2	96	80.122	ENSAPOG00000020682	ptcd2	86	80.122	Acanthochromis_polyacanthus
ENSONIG00000011269	ptcd2	96	44.713	ENSAMEG00000007194	PTCD2	85	44.713	Ailuropoda_melanoleuca
ENSONIG00000011269	ptcd2	79	83.577	ENSACIG00000002053	ptcd2	81	83.577	Amphilophus_citrinellus
ENSONIG00000011269	ptcd2	98	80.838	ENSAOCG00000006616	ptcd2	86	80.838	Amphiprion_ocellaris
ENSONIG00000011269	ptcd2	98	80.539	ENSAPEG00000022926	ptcd2	86	80.539	Amphiprion_percula
ENSONIG00000011269	ptcd2	96	46.246	ENSACAG00000009747	PTCD2	85	46.246	Anolis_carolinensis
ENSONIG00000011269	ptcd2	90	44.340	ENSANAG00000029353	PTCD2	82	44.340	Aotus_nancymaae
ENSONIG00000011269	ptcd2	98	97.904	ENSACLG00000027742	ptcd2	86	97.904	Astatotilapia_calliptera
ENSONIG00000011269	ptcd2	89	51.466	ENSAMXG00000029404	ptcd2	82	51.466	Astyanax_mexicanus
ENSONIG00000011269	ptcd2	85	47.751	ENSBTAG00000014675	PTCD2	75	47.751	Bos_taurus
ENSONIG00000011269	ptcd2	90	43.396	ENSCJAG00000016364	PTCD2	82	43.396	Callithrix_jacchus
ENSONIG00000011269	ptcd2	96	47.879	ENSCAFG00000007982	PTCD2	77	47.879	Canis_familiaris
ENSONIG00000011269	ptcd2	84	50.523	ENSCAFG00020019147	PTCD2	81	50.523	Canis_lupus_dingo
ENSONIG00000011269	ptcd2	85	47.751	ENSCHIG00000017118	PTCD2	75	47.751	Capra_hircus
ENSONIG00000011269	ptcd2	85	45.819	ENSCPOG00000040168	PTCD2	78	45.819	Cavia_porcellus
ENSONIG00000011269	ptcd2	90	44.025	ENSCCAG00000029389	-	82	44.025	Cebus_capucinus
ENSONIG00000011269	ptcd2	85	43.377	ENSCCAG00000021996	-	93	43.377	Cebus_capucinus
ENSONIG00000011269	ptcd2	92	46.032	ENSCATG00000019069	PTCD2	82	46.032	Cercocebus_atys
ENSONIG00000011269	ptcd2	86	44.518	ENSCLAG00000000072	PTCD2	79	44.518	Chinchilla_lanigera
ENSONIG00000011269	ptcd2	85	47.059	ENSCSAG00000015623	PTCD2	82	45.714	Chlorocebus_sabaeus
ENSONIG00000011269	ptcd2	82	48.921	ENSCPBG00000000216	PTCD2	76	48.921	Chrysemys_picta_bellii
ENSONIG00000011269	ptcd2	92	46.203	ENSCANG00000035636	PTCD2	81	46.203	Colobus_angolensis_palliatus
ENSONIG00000011269	ptcd2	90	46.602	ENSCGRG00001015289	Ptcd2	68	46.602	Cricetulus_griseus_chok1gshd
ENSONIG00000011269	ptcd2	90	46.602	ENSCGRG00000006193	Ptcd2	68	46.602	Cricetulus_griseus_crigri
ENSONIG00000011269	ptcd2	98	75.595	ENSCVAG00000001285	ptcd2	86	75.595	Cyprinodon_variegatus
ENSONIG00000011269	ptcd2	96	52.744	ENSDARG00000035391	ptcd2	86	52.744	Danio_rerio
ENSONIG00000011269	ptcd2	84	46.875	ENSDNOG00000008719	PTCD2	75	46.875	Dasypus_novemcinctus
ENSONIG00000011269	ptcd2	92	45.768	ENSDORG00000004921	Ptcd2	82	45.768	Dipodomys_ordii
ENSONIG00000011269	ptcd2	91	43.770	ENSETEG00000016542	PTCD2	79	43.770	Echinops_telfairi
ENSONIG00000011269	ptcd2	85	47.603	ENSEASG00005018038	PTCD2	76	47.603	Equus_asinus_asinus
ENSONIG00000011269	ptcd2	85	47.603	ENSECAG00000007022	PTCD2	75	47.603	Equus_caballus
ENSONIG00000011269	ptcd2	89	47.059	ENSEEUG00000014031	PTCD2	79	47.059	Erinaceus_europaeus
ENSONIG00000011269	ptcd2	96	62.500	ENSELUG00000003584	ptcd2	86	62.500	Esox_lucius
ENSONIG00000011269	ptcd2	75	49.219	ENSFCAG00000045432	PTCD2	60	49.219	Felis_catus
ENSONIG00000011269	ptcd2	78	47.566	ENSFALG00000010299	PTCD2	81	47.566	Ficedula_albicollis
ENSONIG00000011269	ptcd2	88	43.322	ENSFDAG00000018461	PTCD2	80	43.322	Fukomys_damarensis
ENSONIG00000011269	ptcd2	96	62.310	ENSGMOG00000003637	ptcd2	85	62.310	Gadus_morhua
ENSONIG00000011269	ptcd2	85	47.603	ENSGALG00000038260	PTCD2	76	47.603	Gallus_gallus
ENSONIG00000011269	ptcd2	82	52.878	ENSGAGG00000021952	PTCD2	71	52.878	Gopherus_agassizii
ENSONIG00000011269	ptcd2	91	44.062	ENSGGOG00000010695	PTCD2	82	44.062	Gorilla_gorilla
ENSONIG00000011269	ptcd2	98	97.006	ENSHBUG00000009191	ptcd2	86	97.006	Haplochromis_burtoni
ENSONIG00000011269	ptcd2	85	46.713	ENSHGLG00000001234	PTCD2	75	46.713	Heterocephalus_glaber_female
ENSONIG00000011269	ptcd2	85	46.713	ENSHGLG00100015419	PTCD2	75	46.713	Heterocephalus_glaber_male
ENSONIG00000011269	ptcd2	96	66.163	ENSHCOG00000001703	ptcd2	86	66.163	Hippocampus_comes
ENSONIG00000011269	ptcd2	96	54.985	ENSIPUG00000006080	ptcd2	86	54.985	Ictalurus_punctatus
ENSONIG00000011269	ptcd2	90	44.984	ENSSTOG00000006596	PTCD2	80	44.984	Ictidomys_tridecemlineatus
ENSONIG00000011269	ptcd2	87	46.465	ENSJJAG00000024388	Ptcd2	78	46.465	Jaculus_jaculus
ENSONIG00000011269	ptcd2	93	65.300	ENSKMAG00000009329	ptcd2	83	65.300	Kryptolebias_marmoratus
ENSONIG00000011269	ptcd2	98	72.156	ENSLBEG00000024871	ptcd2	86	72.156	Labrus_bergylta
ENSONIG00000011269	ptcd2	94	55.901	ENSLOCG00000011122	ptcd2	84	55.901	Lepisosteus_oculatus
ENSONIG00000011269	ptcd2	81	50.545	ENSLAFG00000004115	PTCD2	88	50.545	Loxodonta_africana
ENSONIG00000011269	ptcd2	96	45.593	ENSMFAG00000031516	PTCD2	85	45.593	Macaca_fascicularis
ENSONIG00000011269	ptcd2	92	45.886	ENSMNEG00000007537	PTCD2	82	45.886	Macaca_nemestrina
ENSONIG00000011269	ptcd2	96	44.985	ENSMLEG00000031093	PTCD2	85	44.985	Mandrillus_leucophaeus
ENSONIG00000011269	ptcd2	96	78.287	ENSMAMG00000018529	ptcd2	86	78.287	Mastacembelus_armatus
ENSONIG00000011269	ptcd2	98	97.904	ENSMZEG00005003625	ptcd2	86	97.904	Maylandia_zebra
ENSONIG00000011269	ptcd2	84	47.552	ENSMGAG00000005033	PTCD2	82	47.552	Meleagris_gallopavo
ENSONIG00000011269	ptcd2	72	42.745	ENSMAUG00000020253	Ptcd2	79	42.745	Mesocricetus_auratus
ENSONIG00000011269	ptcd2	91	44.375	ENSMICG00000004535	PTCD2	83	44.375	Microcebus_murinus
ENSONIG00000011269	ptcd2	91	46.624	ENSMOCG00000019985	Ptcd2	82	46.624	Microtus_ochrogaster
ENSONIG00000011269	ptcd2	94	45.062	ENSMODG00000001695	PTCD2	84	45.062	Monodelphis_domestica
ENSONIG00000011269	ptcd2	96	78.593	ENSMALG00000022372	ptcd2	86	78.593	Monopterus_albus
ENSONIG00000011269	ptcd2	84	46.875	MGP_CAROLIEiJ_G0018829	Ptcd2	76	46.875	Mus_caroli
ENSONIG00000011269	ptcd2	85	46.367	ENSMUSG00000021650	Ptcd2	76	46.367	Mus_musculus
ENSONIG00000011269	ptcd2	84	48.611	MGP_PahariEiJ_G0015904	Ptcd2	76	48.611	Mus_pahari
ENSONIG00000011269	ptcd2	85	47.405	MGP_SPRETEiJ_G0019711	Ptcd2	76	47.405	Mus_spretus
ENSONIG00000011269	ptcd2	85	48.097	ENSMPUG00000014401	PTCD2	75	48.097	Mustela_putorius_furo
ENSONIG00000011269	ptcd2	85	47.059	ENSMLUG00000007374	PTCD2	76	46.939	Myotis_lucifugus
ENSONIG00000011269	ptcd2	85	47.059	ENSNGAG00000005027	Ptcd2	75	47.059	Nannospalax_galili
ENSONIG00000011269	ptcd2	96	96.942	ENSNBRG00000008174	ptcd2	86	96.942	Neolamprologus_brichardi
ENSONIG00000011269	ptcd2	75	97.665	ENSNBRG00000000092	-	81	97.665	Neolamprologus_brichardi
ENSONIG00000011269	ptcd2	90	44.654	ENSNLEG00000004516	PTCD2	82	44.654	Nomascus_leucogenys
ENSONIG00000011269	ptcd2	87	46.309	ENSOPRG00000007290	PTCD2	77	46.309	Ochotona_princeps
ENSONIG00000011269	ptcd2	88	45.928	ENSODEG00000016417	PTCD2	80	45.928	Octodon_degus
ENSONIG00000011269	ptcd2	85	47.059	ENSOCUG00000007970	PTCD2	75	47.059	Oryctolagus_cuniculus
ENSONIG00000011269	ptcd2	98	72.619	ENSORLG00000003851	ptcd2	86	72.619	Oryzias_latipes
ENSONIG00000011269	ptcd2	96	72.036	ENSORLG00020009823	ptcd2	86	72.036	Oryzias_latipes_hni
ENSONIG00000011269	ptcd2	85	71.478	ENSORLG00015016777	ptcd2	83	71.478	Oryzias_latipes_hsok
ENSONIG00000011269	ptcd2	98	73.512	ENSOMEG00000012396	ptcd2	82	73.512	Oryzias_melastigma
ENSONIG00000011269	ptcd2	91	44.688	ENSOGAG00000008390	PTCD2	82	44.688	Otolemur_garnettii
ENSONIG00000011269	ptcd2	85	47.751	ENSOARG00000005087	PTCD2	74	47.751	Ovis_aries
ENSONIG00000011269	ptcd2	91	44.062	ENSPPAG00000028480	PTCD2	82	44.062	Pan_paniscus
ENSONIG00000011269	ptcd2	91	43.750	ENSPTRG00000016968	PTCD2	82	43.750	Pan_troglodytes
ENSONIG00000011269	ptcd2	84	47.552	ENSPANG00000006611	PTCD2	74	47.552	Papio_anubis
ENSONIG00000011269	ptcd2	94	58.824	ENSPKIG00000019896	ptcd2	84	58.824	Paramormyrops_kingsleyae
ENSONIG00000011269	ptcd2	82	52.158	ENSPSIG00000014559	PTCD2	86	52.158	Pelodiscus_sinensis
ENSONIG00000011269	ptcd2	90	47.896	ENSPEMG00000000884	Ptcd2	81	47.896	Peromyscus_maniculatus_bairdii
ENSONIG00000011269	ptcd2	87	47.492	ENSPCIG00000029047	PTCD2	78	47.492	Phascolarctos_cinereus
ENSONIG00000011269	ptcd2	95	76.380	ENSPLAG00000010456	ptcd2	85	76.380	Poecilia_latipinna
ENSONIG00000011269	ptcd2	97	75.449	ENSPREG00000021797	ptcd2	85	75.449	Poecilia_reticulata
ENSONIG00000011269	ptcd2	85	39.446	ENSPPYG00000015543	PTCD2	71	39.446	Pongo_abelii
ENSONIG00000011269	ptcd2	80	41.971	ENSPCAG00000006806	PTCD2	87	41.971	Procavia_capensis
ENSONIG00000011269	ptcd2	80	50.000	ENSPVAG00000010935	PTCD2	71	50.000	Pteropus_vampyrus
ENSONIG00000011269	ptcd2	98	97.305	ENSPNYG00000003122	ptcd2	86	97.305	Pundamilia_nyererei
ENSONIG00000011269	ptcd2	94	64.062	ENSPNAG00000021490	ptcd2	85	63.303	Pygocentrus_nattereri
ENSONIG00000011269	ptcd2	90	47.588	ENSRNOG00000028403	Ptcd2	81	47.588	Rattus_norvegicus
ENSONIG00000011269	ptcd2	92	41.456	ENSRBIG00000032929	PTCD2	80	41.456	Rhinopithecus_bieti
ENSONIG00000011269	ptcd2	92	45.570	ENSRROG00000000080	PTCD2	82	45.570	Rhinopithecus_roxellana
ENSONIG00000011269	ptcd2	90	43.396	ENSSBOG00000018911	PTCD2	83	43.396	Saimiri_boliviensis_boliviensis
ENSONIG00000011269	ptcd2	91	44.937	ENSSHAG00000003833	PTCD2	81	44.937	Sarcophilus_harrisii
ENSONIG00000011269	ptcd2	97	55.193	ENSSFOG00015015415	ptcd2	88	55.193	Scleropages_formosus
ENSONIG00000011269	ptcd2	96	66.465	ENSSMAG00000010350	ptcd2	86	66.465	Scophthalmus_maximus
ENSONIG00000011269	ptcd2	98	79.341	ENSSDUG00000008142	ptcd2	84	79.341	Seriola_dumerili
ENSONIG00000011269	ptcd2	96	80.122	ENSSLDG00000015284	ptcd2	86	80.122	Seriola_lalandi_dorsalis
ENSONIG00000011269	ptcd2	80	41.606	ENSSARG00000004983	PTCD2	87	41.606	Sorex_araneus
ENSONIG00000011269	ptcd2	80	50.000	ENSSPUG00000000176	PTCD2	70	50.000	Sphenodon_punctatus
ENSONIG00000011269	ptcd2	98	72.156	ENSSPAG00000008591	ptcd2	86	72.156	Stegastes_partitus
ENSONIG00000011269	ptcd2	89	46.906	ENSSSCG00000016975	PTCD2	72	46.906	Sus_scrofa
ENSONIG00000011269	ptcd2	84	48.780	ENSTGUG00000005705	PTCD2	83	48.780	Taeniopygia_guttata
ENSONIG00000011269	ptcd2	82	46.897	ENSTBEG00000016559	PTCD2	75	46.897	Tupaia_belangeri
ENSONIG00000011269	ptcd2	81	49.819	ENSTTRG00000011851	PTCD2	71	49.819	Tursiops_truncatus
ENSONIG00000011269	ptcd2	96	44.713	ENSUAMG00000007583	PTCD2	77	44.713	Ursus_americanus
ENSONIG00000011269	ptcd2	89	46.078	ENSUMAG00000007666	PTCD2	80	46.078	Ursus_maritimus
ENSONIG00000011269	ptcd2	85	46.367	ENSVPAG00000009597	PTCD2	74	46.367	Vicugna_pacos
ENSONIG00000011269	ptcd2	85	49.827	ENSVVUG00000007299	-	77	49.660	Vulpes_vulpes
ENSONIG00000011269	ptcd2	81	47.273	ENSXETG00000031652	PTCD2	72	47.273	Xenopus_tropicalis
ENSONIG00000011269	ptcd2	98	75.522	ENSXMAG00000005940	ptcd2	80	75.522	Xiphophorus_maculatus