EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000011478 (Gene tree)
Gene ID: 100705812
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 10430 bases
Position: chrGL831456.1:223789-234218
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000014446	PAM2	PF07145.15	1.5e-05	1	1
ENSONIP00000014445	PAM2	PF07145.15	1.7e-05	1	1
ENSONIP00000014446	LsmAD	PF06741.13	3.6e-18	1	1
ENSONIP00000014445	LsmAD	PF06741.13	3.6e-18	1	1
ENSONIP00000014446	SM-ATX	PF14438.6	2e-20	1	1
ENSONIP00000014445	SM-ATX	PF14438.6	2.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000014456	-	3794	-	ENSONIP00000014445	1028 (aa)	-	I3K000
ENSONIT00000014457	-	2751	-	ENSONIP00000014446	916 (aa)	-	I3K001

Gene Model

Click here to download ENSONIG00000011478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000011478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000011478	-	64	69.259	ENSONIG00000009388	atxn2l	97	71.111
ENSONIG00000011478	-	65	53.405	ENSONIG00000014521	atxn2	58	53.405

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000011478	-	100	45.732	ENSG00000168488	ATXN2L	100	68.085	Homo_sapiens
ENSONIG00000011478	-	100	86.170	ENSAPOG00000021412	-	98	87.081	Acanthochromis_polyacanthus
ENSONIG00000011478	-	98	52.809	ENSAPOG00000010103	atxn2l	99	54.528	Acanthochromis_polyacanthus
ENSONIG00000011478	-	82	88.537	ENSACIG00000014731	-	99	85.584	Amphilophus_citrinellus
ENSONIG00000011478	-	94	46.184	ENSACIG00000024435	atxn2l	95	54.762	Amphilophus_citrinellus
ENSONIG00000011478	-	90	86.066	ENSAOCG00000002581	-	100	87.674	Amphiprion_ocellaris
ENSONIG00000011478	-	100	86.500	ENSAPEG00000011038	-	100	87.946	Amphiprion_percula
ENSONIG00000011478	-	51	53.058	ENSATEG00000017689	atxn2l	98	52.448	Anabas_testudineus
ENSONIG00000011478	-	100	85.521	ENSATEG00000019382	-	98	86.197	Anabas_testudineus
ENSONIG00000011478	-	100	98.444	ENSACLG00000009975	-	98	98.444	Astatotilapia_calliptera
ENSONIG00000011478	-	87	78.846	ENSAMXG00000003332	atxn2l	94	84.615	Astyanax_mexicanus
ENSONIG00000011478	-	99	62.959	ENSAMXG00000020362	-	97	62.124	Astyanax_mexicanus
ENSONIG00000011478	-	96	46.097	ENSCPOG00000010521	ATXN2L	78	68.571	Cavia_porcellus
ENSONIG00000011478	-	87	69.020	ENSCATG00000021354	ATXN2L	56	65.799	Cercocebus_atys
ENSONIG00000011478	-	83	65.827	ENSCLAG00000016117	ATXN2L	79	67.578	Chinchilla_lanigera
ENSONIG00000011478	-	86	42.689	ENSCPBG00000003859	ATXN2L	57	36.379	Chrysemys_picta_bellii
ENSONIG00000011478	-	83	65.468	ENSCGRG00000001500	Atxn2l	69	36.478	Cricetulus_griseus_crigri
ENSONIG00000011478	-	60	79.321	ENSCSEG00000008530	-	96	82.314	Cynoglossus_semilaevis
ENSONIG00000011478	-	100	82.285	ENSCVAG00000015825	-	100	82.865	Cyprinodon_variegatus
ENSONIG00000011478	-	100	57.330	ENSDARG00000011597	atxn2l	98	57.664	Danio_rerio
ENSONIG00000011478	-	100	44.444	ENSEASG00005014992	ATXN2L	84	69.412	Equus_asinus_asinus
ENSONIG00000011478	-	99	57.753	ENSELUG00000023740	atxn2l	99	58.984	Esox_lucius
ENSONIG00000011478	-	87	66.811	ENSELUG00000022915	-	89	65.946	Esox_lucius
ENSONIG00000011478	-	67	71.631	ENSFHEG00000004491	-	84	72.057	Fundulus_heteroclitus
ENSONIG00000011478	-	60	67.624	ENSGMOG00000006016	-	100	66.922	Gadus_morhua
ENSONIG00000011478	-	57	66.364	ENSGMOG00000000316	atxn2l	79	65.079	Gadus_morhua
ENSONIG00000011478	-	71	80.680	ENSGAFG00000019364	-	99	81.497	Gambusia_affinis
ENSONIG00000011478	-	100	77.124	ENSGACG00000007446	-	100	77.756	Gasterosteus_aculeatus
ENSONIG00000011478	-	100	43.763	ENSGAGG00000006078	ATXN2L	55	67.442	Gopherus_agassizii
ENSONIG00000011478	-	82	55.805	ENSGGOG00000036669	-	67	45.195	Gorilla_gorilla
ENSONIG00000011478	-	100	98.249	ENSHBUG00000007997	-	100	98.249	Haplochromis_burtoni
ENSONIG00000011478	-	85	66.667	ENSHGLG00100000705	ATXN2L	69	35.007	Heterocephalus_glaber_male
ENSONIG00000011478	-	82	86.061	ENSHCOG00000017587	-	100	86.970	Hippocampus_comes
ENSONIG00000011478	-	100	60.446	ENSIPUG00000001761	atxn2l	97	59.630	Ictalurus_punctatus
ENSONIG00000011478	-	100	82.689	ENSKMAG00000021450	-	100	83.559	Kryptolebias_marmoratus
ENSONIG00000011478	-	100	81.094	ENSLBEG00000022720	-	98	82.534	Labrus_bergylta
ENSONIG00000011478	-	96	46.089	ENSMFAG00000030590	ATXN2L	76	66.171	Macaca_fascicularis
ENSONIG00000011478	-	100	82.769	ENSMAMG00000013005	-	98	83.865	Mastacembelus_armatus
ENSONIG00000011478	-	100	98.444	ENSMZEG00005013869	-	98	98.444	Maylandia_zebra
ENSONIG00000011478	-	100	45.066	ENSMOCG00000020882	Atxn2l	69	36.875	Microtus_ochrogaster
ENSONIG00000011478	-	94	72.951	ENSMMOG00000001440	-	98	76.489	Mola_mola
ENSONIG00000011478	-	93	76.653	ENSMALG00000008430	-	93	81.654	Monopterus_albus
ENSONIG00000011478	-	100	45.787	MGP_CAROLIEiJ_G0030450	Atxn2l	77	70.588	Mus_caroli
ENSONIG00000011478	-	100	45.584	ENSMUSG00000032637	Atxn2l	77	70.588	Mus_musculus
ENSONIG00000011478	-	100	45.381	MGP_SPRETEiJ_G0031564	Atxn2l	77	70.588	Mus_spretus
ENSONIG00000011478	-	83	65.098	ENSNGAG00000021446	Atxn2l	96	62.319	Nannospalax_galili
ENSONIG00000011478	-	90	97.354	ENSNBRG00000012039	-	57	94.862	Neolamprologus_brichardi
ENSONIG00000011478	-	100	44.721	ENSNLEG00000011004	ATXN2L	65	36.510	Nomascus_leucogenys
ENSONIG00000011478	-	79	50.000	ENSNLEG00000033414	-	61	50.000	Nomascus_leucogenys
ENSONIG00000011478	-	100	80.676	ENSORLG00000006059	-	98	81.063	Oryzias_latipes
ENSONIG00000011478	-	100	80.290	ENSORLG00020000991	-	98	80.966	Oryzias_latipes_hni
ENSONIG00000011478	-	100	80.386	ENSORLG00015014174	-	98	80.870	Oryzias_latipes_hsok
ENSONIG00000011478	-	100	81.932	ENSOMEG00000021118	-	98	82.126	Oryzias_melastigma
ENSONIG00000011478	-	100	45.000	ENSPANG00000018770	ATXN2L	63	66.171	Papio_anubis
ENSONIG00000011478	-	97	62.108	ENSPKIG00000018462	-	99	61.611	Paramormyrops_kingsleyae
ENSONIG00000011478	-	81	62.799	ENSPSIG00000004866	ATXN2L	75	66.667	Pelodiscus_sinensis
ENSONIG00000011478	-	73	78.917	ENSPMGG00000014821	-	97	79.581	Periophthalmus_magnuspinnatus
ENSONIG00000011478	-	100	79.691	ENSPFOG00000005935	-	100	81.528	Poecilia_formosa
ENSONIG00000011478	-	100	79.594	ENSPLAG00000017094	-	100	81.431	Poecilia_latipinna
ENSONIG00000011478	-	100	79.594	ENSPMEG00000017227	-	100	81.431	Poecilia_mexicana
ENSONIG00000011478	-	100	80.077	ENSPREG00000023090	-	100	81.915	Poecilia_reticulata
ENSONIG00000011478	-	96	41.139	ENSPVAG00000003958	ATXN2L	66	58.527	Pteropus_vampyrus
ENSONIG00000011478	-	66	71.020	ENSPNYG00000012482	atxn2l	94	52.011	Pundamilia_nyererei
ENSONIG00000011478	-	100	98.444	ENSPNYG00000017058	-	98	98.444	Pundamilia_nyererei
ENSONIG00000011478	-	100	59.833	ENSPNAG00000014538	atxn2l	99	60.301	Pygocentrus_nattereri
ENSONIG00000011478	-	99	62.500	ENSPNAG00000023685	-	98	61.860	Pygocentrus_nattereri
ENSONIG00000011478	-	74	69.008	ENSRBIG00000036712	ATXN2L	81	69.008	Rhinopithecus_bieti
ENSONIG00000011478	-	100	43.396	ENSSHAG00000012015	ATXN2L	95	44.612	Sarcophilus_harrisii
ENSONIG00000011478	-	95	59.891	ENSSFOG00015021588	-	99	58.643	Scleropages_formosus
ENSONIG00000011478	-	100	57.250	ENSSFOG00015001018	atxn2l	99	56.543	Scleropages_formosus
ENSONIG00000011478	-	100	84.282	ENSSMAG00000016932	-	98	85.342	Scophthalmus_maximus
ENSONIG00000011478	-	50	54.647	ENSSMAG00000016365	atxn2l	95	52.527	Scophthalmus_maximus
ENSONIG00000011478	-	100	86.982	ENSSDUG00000023014	-	100	88.139	Seriola_dumerili
ENSONIG00000011478	-	84	91.051	ENSSLDG00000017701	-	97	92.607	Seriola_lalandi_dorsalis
ENSONIG00000011478	-	100	85.371	ENSSPAG00000008174	-	98	86.910	Stegastes_partitus
ENSONIG00000011478	-	99	83.203	ENSTRUG00000007132	-	98	82.995	Takifugu_rubripes
ENSONIG00000011478	-	100	80.732	ENSTNIG00000018942	-	100	80.443	Tetraodon_nigroviridis
ENSONIG00000011478	-	87	50.844	ENSTTRG00000005913	ATXN2L	66	68.605	Tursiops_truncatus
ENSONIG00000011478	-	80	64.228	ENSUMAG00000009437	ATXN2L	95	66.296	Ursus_maritimus
ENSONIG00000011478	-	88	58.497	ENSXETG00000014990	atxn2l	66	63.953	Xenopus_tropicalis
ENSONIG00000011478	-	80	80.720	ENSXCOG00000001128	-	99	80.720	Xiphophorus_couchianus
ENSONIG00000011478	-	100	80.231	ENSXMAG00000010133	-	100	81.292	Xiphophorus_maculatus