EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000011481 (Gene tree)
Gene ID: 100693779
Gene Symbol: snd1
Alias: -
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 181292 bases
Position: chrGL831167.1:1102519-1283810
Accession: ZDB-GENE-030131-3124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000014449	TUDOR	PF00567.24	3.6e-28	1	1
ENSONIP00000014449	SNase	PF00565.17	9.4e-66	1	4
ENSONIP00000014449	SNase	PF00565.17	9.4e-66	2	4
ENSONIP00000014449	SNase	PF00565.17	9.4e-66	3	4
ENSONIP00000014449	SNase	PF00565.17	9.4e-66	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000014460	-	2808	-	ENSONIP00000014449	935 (aa)	-	I3K004

Gene Model

Click here to download ENSONIG00000011481's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000011481's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000011481	snd1	96	83.853	ENSG00000197157	SND1	99	82.857	Homo_sapiens
ENSONIG00000011481	snd1	97	95.170	ENSAPOG00000017599	snd1	100	95.170	Acanthochromis_polyacanthus
ENSONIG00000011481	snd1	98	82.860	ENSAMEG00000004664	SND1	96	82.131	Ailuropoda_melanoleuca
ENSONIG00000011481	snd1	97	92.536	ENSACIG00000003551	snd1	100	92.536	Amphilophus_citrinellus
ENSONIG00000011481	snd1	97	95.170	ENSAOCG00000014166	snd1	100	95.170	Amphiprion_ocellaris
ENSONIG00000011481	snd1	97	94.951	ENSAPEG00000007067	snd1	100	94.951	Amphiprion_percula
ENSONIG00000011481	snd1	96	94.631	ENSATEG00000018475	snd1	89	94.631	Anabas_testudineus
ENSONIG00000011481	snd1	96	83.964	ENSANAG00000034463	SND1	99	84.199	Aotus_nancymaae
ENSONIG00000011481	snd1	97	99.231	ENSACLG00000022897	snd1	100	99.231	Astatotilapia_calliptera
ENSONIG00000011481	snd1	97	90.330	ENSAMXG00000016318	snd1	99	90.330	Astyanax_mexicanus
ENSONIG00000011481	snd1	96	84.187	ENSBTAG00000010692	SND1	99	83.187	Bos_taurus
ENSONIG00000011481	snd1	96	46.630	WBGene00006626	tsn-1	99	46.957	Caenorhabditis_elegans
ENSONIG00000011481	snd1	96	83.742	ENSCJAG00000017668	SND1	99	83.973	Callithrix_jacchus
ENSONIG00000011481	snd1	97	83.333	ENSCAFG00000001700	SND1	100	83.333	Canis_familiaris
ENSONIG00000011481	snd1	97	83.333	ENSCAFG00020021639	SND1	100	83.333	Canis_lupus_dingo
ENSONIG00000011481	snd1	96	84.076	ENSCHIG00000023390	SND1	98	84.312	Capra_hircus
ENSONIG00000011481	snd1	68	86.491	ENSTSYG00000004979	SND1	96	86.491	Carlito_syrichta
ENSONIG00000011481	snd1	96	73.192	ENSCAPG00000010677	SND1	98	73.192	Cavia_aperea
ENSONIG00000011481	snd1	96	83.853	ENSCPOG00000006251	SND1	99	82.857	Cavia_porcellus
ENSONIG00000011481	snd1	96	83.964	ENSCCAG00000036847	SND1	98	84.199	Cebus_capucinus
ENSONIG00000011481	snd1	96	84.076	ENSCATG00000035214	SND1	99	84.312	Cercocebus_atys
ENSONIG00000011481	snd1	96	84.076	ENSCLAG00000011796	SND1	100	83.224	Chinchilla_lanigera
ENSONIG00000011481	snd1	96	84.076	ENSCSAG00000010182	SND1	99	83.077	Chlorocebus_sabaeus
ENSONIG00000011481	snd1	76	76.471	ENSCHOG00000002218	SND1	86	76.471	Choloepus_hoffmanni
ENSONIG00000011481	snd1	97	83.535	ENSCPBG00000018094	SND1	100	83.535	Chrysemys_picta_bellii
ENSONIG00000011481	snd1	95	57.364	ENSCING00000000524	-	99	56.786	Ciona_intestinalis
ENSONIG00000011481	snd1	97	57.174	ENSCSAVG00000008807	-	99	57.174	Ciona_savignyi
ENSONIG00000011481	snd1	96	84.076	ENSCANG00000035119	SND1	99	83.077	Colobus_angolensis_palliatus
ENSONIG00000011481	snd1	96	83.742	ENSCGRG00001022514	Snd1	100	83.004	Cricetulus_griseus_chok1gshd
ENSONIG00000011481	snd1	95	83.973	ENSCGRG00000012277	Snd1	99	83.973	Cricetulus_griseus_crigri
ENSONIG00000011481	snd1	97	92.426	ENSCSEG00000008661	snd1	100	92.426	Cynoglossus_semilaevis
ENSONIG00000011481	snd1	97	94.072	ENSCVAG00000010316	snd1	100	94.072	Cyprinodon_variegatus
ENSONIG00000011481	snd1	97	89.814	ENSDARG00000006766	snd1	99	91.182	Danio_rerio
ENSONIG00000011481	snd1	95	82.340	ENSDNOG00000006795	SND1	100	82.340	Dasypus_novemcinctus
ENSONIG00000011481	snd1	96	83.853	ENSDORG00000000336	Snd1	99	82.857	Dipodomys_ordii
ENSONIG00000011481	snd1	96	51.185	FBgn0035121	Tudor-SN	99	50.851	Drosophila_melanogaster
ENSONIG00000011481	snd1	87	91.667	ENSETEG00000000375	SND1	92	91.667	Echinops_telfairi
ENSONIG00000011481	snd1	56	64.660	ENSEBUG00000014201	-	84	76.630	Eptatretus_burgeri
ENSONIG00000011481	snd1	96	82.913	ENSEASG00005008513	SND1	99	81.946	Equus_asinus_asinus
ENSONIG00000011481	snd1	96	84.076	ENSECAG00000011451	SND1	99	83.077	Equus_caballus
ENSONIG00000011481	snd1	96	74.722	ENSEEUG00000014737	SND1	99	73.956	Erinaceus_europaeus
ENSONIG00000011481	snd1	97	88.403	ENSELUG00000001805	snd1	97	88.403	Esox_lucius
ENSONIG00000011481	snd1	97	83.224	ENSFCAG00000008289	SND1	100	83.224	Felis_catus
ENSONIG00000011481	snd1	96	83.817	ENSFDAG00000015881	SND1	100	82.785	Fukomys_damarensis
ENSONIG00000011481	snd1	97	92.266	ENSFHEG00000004093	snd1	99	93.857	Fundulus_heteroclitus
ENSONIG00000011481	snd1	73	84.746	ENSGMOG00000018932	snd1	66	84.746	Gadus_morhua
ENSONIG00000011481	snd1	97	95.060	ENSGAFG00000008421	snd1	100	95.060	Gambusia_affinis
ENSONIG00000011481	snd1	97	60.087	ENSGACG00000019793	snd1	100	60.087	Gasterosteus_aculeatus
ENSONIG00000011481	snd1	96	84.076	ENSGGOG00000009614	SND1	99	84.312	Gorilla_gorilla
ENSONIG00000011481	snd1	97	99.121	ENSHBUG00000019135	snd1	100	99.121	Haplochromis_burtoni
ENSONIG00000011481	snd1	96	83.630	ENSHGLG00000003618	SND1	99	82.637	Heterocephalus_glaber_female
ENSONIG00000011481	snd1	97	82.967	ENSHGLG00100012449	SND1	99	82.967	Heterocephalus_glaber_male
ENSONIG00000011481	snd1	97	92.097	ENSHCOG00000005266	snd1	100	92.097	Hippocampus_comes
ENSONIG00000011481	snd1	97	89.023	ENSIPUG00000013279	snd1	99	89.023	Ictalurus_punctatus
ENSONIG00000011481	snd1	96	84.076	ENSSTOG00000002140	SND1	99	83.077	Ictidomys_tridecemlineatus
ENSONIG00000011481	snd1	96	83.964	ENSJJAG00000009561	Snd1	99	82.967	Jaculus_jaculus
ENSONIG00000011481	snd1	97	94.402	ENSKMAG00000016997	snd1	100	94.402	Kryptolebias_marmoratus
ENSONIG00000011481	snd1	97	93.304	ENSLBEG00000013563	snd1	100	93.304	Labrus_bergylta
ENSONIG00000011481	snd1	96	88.606	ENSLOCG00000015537	snd1	99	87.704	Lepisosteus_oculatus
ENSONIG00000011481	snd1	97	83.407	ENSLAFG00000009696	SND1	99	83.407	Loxodonta_africana
ENSONIG00000011481	snd1	96	84.076	ENSMFAG00000038114	SND1	99	84.312	Macaca_fascicularis
ENSONIG00000011481	snd1	96	84.076	ENSMMUG00000015432	SND1	99	83.077	Macaca_mulatta
ENSONIG00000011481	snd1	96	84.076	ENSMNEG00000039808	SND1	100	84.329	Macaca_nemestrina
ENSONIG00000011481	snd1	96	83.964	ENSMLEG00000029040	SND1	100	84.216	Mandrillus_leucophaeus
ENSONIG00000011481	snd1	97	95.170	ENSMAMG00000011739	snd1	100	95.170	Mastacembelus_armatus
ENSONIG00000011481	snd1	97	99.231	ENSMZEG00005005681	snd1	100	99.231	Maylandia_zebra
ENSONIG00000011481	snd1	96	83.964	ENSMICG00000000097	SND1	99	82.967	Microcebus_murinus
ENSONIG00000011481	snd1	96	84.187	ENSMOCG00000005040	Snd1	99	83.187	Microtus_ochrogaster
ENSONIG00000011481	snd1	97	94.182	ENSMMOG00000001795	snd1	100	94.182	Mola_mola
ENSONIG00000011481	snd1	96	83.705	ENSMODG00000015182	SND1	100	82.675	Monodelphis_domestica
ENSONIG00000011481	snd1	97	94.512	ENSMALG00000012071	snd1	100	94.512	Monopterus_albus
ENSONIG00000011481	snd1	96	83.929	MGP_CAROLIEiJ_G0028159	Snd1	99	83.980	Mus_caroli
ENSONIG00000011481	snd1	96	83.705	ENSMUSG00000001424	Snd1	99	82.527	Mus_musculus
ENSONIG00000011481	snd1	96	83.929	MGP_PahariEiJ_G0021917	Snd1	99	83.980	Mus_pahari
ENSONIG00000011481	snd1	96	83.929	MGP_SPRETEiJ_G0029159	Snd1	99	82.747	Mus_spretus
ENSONIG00000011481	snd1	97	83.224	ENSMPUG00000006545	SND1	100	83.224	Mustela_putorius_furo
ENSONIG00000011481	snd1	95	83.055	ENSMLUG00000017130	SND1	99	83.055	Myotis_lucifugus
ENSONIG00000011481	snd1	96	83.853	ENSNGAG00000011186	Snd1	99	82.857	Nannospalax_galili
ENSONIG00000011481	snd1	97	99.451	ENSNBRG00000006681	snd1	100	99.451	Neolamprologus_brichardi
ENSONIG00000011481	snd1	97	83.407	ENSNLEG00000012263	SND1	100	84.329	Nomascus_leucogenys
ENSONIG00000011481	snd1	89	91.667	ENSOPRG00000013405	SND1	92	91.667	Ochotona_princeps
ENSONIG00000011481	snd1	96	84.076	ENSODEG00000011502	SND1	100	83.205	Octodon_degus
ENSONIG00000011481	snd1	95	83.483	ENSOANG00000000817	SND1	98	83.483	Ornithorhynchus_anatinus
ENSONIG00000011481	snd1	97	82.637	ENSOCUG00000001620	SND1	99	82.637	Oryctolagus_cuniculus
ENSONIG00000011481	snd1	97	93.194	ENSORLG00000015201	snd1	100	93.194	Oryzias_latipes
ENSONIG00000011481	snd1	97	93.414	ENSORLG00020013991	snd1	100	93.414	Oryzias_latipes_hni
ENSONIG00000011481	snd1	97	93.414	ENSORLG00015012436	snd1	100	93.414	Oryzias_latipes_hsok
ENSONIG00000011481	snd1	97	93.743	ENSOMEG00000006406	snd1	100	93.743	Oryzias_melastigma
ENSONIG00000011481	snd1	96	83.889	ENSOGAG00000013356	SND1	97	81.410	Otolemur_garnettii
ENSONIG00000011481	snd1	95	81.962	ENSOARG00000002149	SND1	100	81.962	Ovis_aries
ENSONIG00000011481	snd1	98	82.366	ENSPPAG00000042947	SND1	99	83.594	Pan_paniscus
ENSONIG00000011481	snd1	97	83.224	ENSPPRG00000004494	SND1	100	83.224	Panthera_pardus
ENSONIG00000011481	snd1	97	83.114	ENSPTIG00000014214	SND1	100	83.114	Panthera_tigris_altaica
ENSONIG00000011481	snd1	98	82.366	ENSPTRG00000023911	SND1	99	84.199	Pan_troglodytes
ENSONIG00000011481	snd1	95	84.312	ENSPANG00000011997	SND1	99	84.312	Papio_anubis
ENSONIG00000011481	snd1	96	86.976	ENSPKIG00000023494	snd1	99	86.369	Paramormyrops_kingsleyae
ENSONIG00000011481	snd1	89	93.900	ENSPMGG00000003629	snd1	100	93.900	Periophthalmus_magnuspinnatus
ENSONIG00000011481	snd1	96	83.964	ENSPEMG00000010240	Snd1	99	82.967	Peromyscus_maniculatus_bairdii
ENSONIG00000011481	snd1	94	74.041	ENSPMAG00000007915	-	99	74.041	Petromyzon_marinus
ENSONIG00000011481	snd1	96	84.263	ENSPCIG00000011561	SND1	100	83.224	Phascolarctos_cinereus
ENSONIG00000011481	snd1	97	94.621	ENSPFOG00000001557	snd1	100	94.621	Poecilia_formosa
ENSONIG00000011481	snd1	99	92.956	ENSPLAG00000018459	snd1	99	92.956	Poecilia_latipinna
ENSONIG00000011481	snd1	97	94.621	ENSPMEG00000006803	snd1	100	94.621	Poecilia_mexicana
ENSONIG00000011481	snd1	97	94.512	ENSPREG00000002189	snd1	100	94.512	Poecilia_reticulata
ENSONIG00000011481	snd1	89	91.667	ENSPPYG00000017972	SND1	99	91.667	Pongo_abelii
ENSONIG00000011481	snd1	96	74.165	ENSPCAG00000011305	SND1	99	73.407	Procavia_capensis
ENSONIG00000011481	snd1	96	84.076	ENSPCOG00000026791	SND1	100	84.329	Propithecus_coquereli
ENSONIG00000011481	snd1	96	82.294	ENSPVAG00000013945	SND1	99	81.319	Pteropus_vampyrus
ENSONIG00000011481	snd1	97	99.121	ENSPNYG00000000932	snd1	100	99.121	Pundamilia_nyererei
ENSONIG00000011481	snd1	97	90.769	ENSPNAG00000001206	snd1	99	90.769	Pygocentrus_nattereri
ENSONIG00000011481	snd1	96	83.705	ENSRNOG00000031173	Snd1	100	82.864	Rattus_norvegicus
ENSONIG00000011481	snd1	68	87.079	ENSRBIG00000027782	-	93	87.121	Rhinopithecus_bieti
ENSONIG00000011481	snd1	96	84.076	ENSRROG00000033020	SND1	99	83.077	Rhinopithecus_roxellana
ENSONIG00000011481	snd1	96	83.964	ENSSBOG00000032461	SND1	99	84.199	Saimiri_boliviensis_boliviensis
ENSONIG00000011481	snd1	95	80.899	ENSSHAG00000015359	SND1	100	80.899	Sarcophilus_harrisii
ENSONIG00000011481	snd1	96	88.137	ENSSFOG00015001103	snd1	99	87.255	Scleropages_formosus
ENSONIG00000011481	snd1	99	92.949	ENSSMAG00000001932	snd1	97	92.949	Scophthalmus_maximus
ENSONIG00000011481	snd1	100	94.444	ENSSDUG00000002699	snd1	96	94.444	Seriola_dumerili
ENSONIG00000011481	snd1	97	87.816	ENSSLDG00000001950	snd1	100	87.816	Seriola_lalandi_dorsalis
ENSONIG00000011481	snd1	84	79.381	ENSSARG00000004877	SND1	92	79.381	Sorex_araneus
ENSONIG00000011481	snd1	68	79.896	ENSSPUG00000017586	SND1	96	79.896	Sphenodon_punctatus
ENSONIG00000011481	snd1	71	94.247	ENSSPAG00000021398	snd1	99	94.247	Stegastes_partitus
ENSONIG00000011481	snd1	96	84.076	ENSSSCG00000016590	SND1	99	83.077	Sus_scrofa
ENSONIG00000011481	snd1	97	93.624	ENSTRUG00000014067	snd1	100	91.767	Takifugu_rubripes
ENSONIG00000011481	snd1	97	92.426	ENSTNIG00000011019	snd1	100	92.426	Tetraodon_nigroviridis
ENSONIG00000011481	snd1	91	78.471	ENSTBEG00000003999	SND1	100	78.471	Tupaia_belangeri
ENSONIG00000011481	snd1	96	79.844	ENSTTRG00000006059	SND1	99	78.901	Tursiops_truncatus
ENSONIG00000011481	snd1	85	83.650	ENSUAMG00000005604	-	93	83.650	Ursus_americanus
ENSONIG00000011481	snd1	67	76.440	ENSUAMG00000002820	-	89	76.440	Ursus_americanus
ENSONIG00000011481	snd1	97	83.224	ENSUMAG00000005960	SND1	100	83.224	Ursus_maritimus
ENSONIG00000011481	snd1	75	91.667	ENSVPAG00000008302	SND1	74	91.667	Vicugna_pacos
ENSONIG00000011481	snd1	97	83.224	ENSVVUG00000007226	SND1	100	83.224	Vulpes_vulpes
ENSONIG00000011481	snd1	94	80.947	ENSXETG00000023043	snd1	100	80.936	Xenopus_tropicalis
ENSONIG00000011481	snd1	90	92.162	ENSXCOG00000013629	snd1	99	92.162	Xiphophorus_couchianus
ENSONIG00000011481	snd1	97	95.280	ENSXMAG00000011469	snd1	100	95.280	Xiphophorus_maculatus