EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000011542 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 1942 bases
Position: chrGL831167.1:1719622-1721563
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000014537	GTP_EFTU	PF00009.27	2.8e-07	1	1
ENSONIP00000014537	MMR_HSR1	PF01926.23	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000014548	-	489	-	ENSONIP00000014537	162 (aa)	-	I3K092

Gene Model

Click here to download ENSONIG00000011542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000011542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000011542	-	99	36.970	ENSONIG00000019036	-	79	36.970
ENSONIG00000011542	-	98	38.994	ENSONIG00000001113	rab5c	72	38.994
ENSONIG00000011542	-	93	30.769	ENSONIG00000009008	dnajc27	58	30.769
ENSONIG00000011542	-	93	31.818	ENSONIG00000005519	rab34b	61	31.818
ENSONIG00000011542	-	99	32.298	ENSONIG00000006876	rab22a	83	32.298
ENSONIG00000011542	-	99	35.329	ENSONIG00000020581	rab9b	81	35.329
ENSONIG00000011542	-	99	31.288	ENSONIG00000013175	rab34a	61	31.288
ENSONIG00000011542	-	90	39.865	ENSONIG00000011559	rab33ba	62	39.865
ENSONIG00000011542	-	96	38.065	ENSONIG00000015990	rab35b	77	38.065
ENSONIG00000011542	-	72	32.203	ENSONIG00000004057	arl8ba	61	32.203
ENSONIG00000011542	-	90	39.865	ENSONIG00000006715	-	63	39.865
ENSONIG00000011542	-	94	36.601	ENSONIG00000002281	rab11al	71	36.601
ENSONIG00000011542	-	96	37.821	ENSONIG00000002284	rab25b	75	37.821
ENSONIG00000011542	-	90	33.562	ENSONIG00000009749	rab23	67	36.076
ENSONIG00000011542	-	89	30.065	ENSONIG00000004448	si:ch73-116o1.2	70	30.065
ENSONIG00000011542	-	98	33.540	ENSONIG00000009978	si:cabz01085950.1	80	33.540
ENSONIG00000011542	-	100	36.310	ENSONIG00000014892	RAB29	81	36.310
ENSONIG00000011542	-	99	36.875	ENSONIG00000002535	rab11ba	73	36.875
ENSONIG00000011542	-	91	34.615	ENSONIG00000011866	rasl11a	61	34.615
ENSONIG00000011542	-	72	32.203	ENSONIG00000020279	arl8bb	61	32.203
ENSONIG00000011542	-	99	36.970	ENSONIG00000020336	RAB7A	79	36.970
ENSONIG00000011542	-	99	34.731	ENSONIG00000020675	rab9a	81	34.731
ENSONIG00000011542	-	99	45.342	ENSONIG00000005781	rab15	76	45.342
ENSONIG00000011542	-	88	31.944	ENSONIG00000019066	rhebl1	78	31.944
ENSONIG00000011542	-	98	35.404	ENSONIG00000008545	RAB39B	76	35.404
ENSONIG00000011542	-	100	41.104	ENSONIG00000016851	-	75	41.104
ENSONIG00000011542	-	90	38.816	ENSONIG00000003367	-	73	38.816
ENSONIG00000011542	-	98	40.881	ENSONIG00000002425	rab5aa	74	40.881
ENSONIG00000011542	-	96	31.447	ENSONIG00000010304	nkiras1	83	31.447
ENSONIG00000011542	-	99	36.875	ENSONIG00000010435	rab11bb	73	36.875
ENSONIG00000011542	-	89	39.189	ENSONIG00000020296	si:dkey-13a21.4	72	39.189
ENSONIG00000011542	-	91	30.667	ENSONIG00000021238	arl4d	71	30.667
ENSONIG00000011542	-	90	38.095	ENSONIG00000003725	rab18a	72	38.095
ENSONIG00000011542	-	93	32.237	ENSONIG00000018503	rheb	82	32.237
ENSONIG00000011542	-	99	37.888	ENSONIG00000002065	rab1ba	79	37.888
ENSONIG00000011542	-	99	36.875	ENSONIG00000016622	rab2a	75	36.875
ENSONIG00000011542	-	96	37.419	ENSONIG00000009443	si:dkey-16l2.16	74	37.419
ENSONIG00000011542	-	99	36.875	ENSONIG00000002544	-	73	36.875
ENSONIG00000011542	-	99	43.125	ENSONIG00000012069	RAB15	76	43.125
ENSONIG00000011542	-	72	32.203	ENSONIG00000014667	arl8a	61	32.203
ENSONIG00000011542	-	94	38.562	ENSONIG00000015072	RAB11A	71	38.562
ENSONIG00000011542	-	90	37.086	ENSONIG00000015828	rab33a	53	37.086
ENSONIG00000011542	-	100	43.827	ENSONIG00000006340	rab13	80	43.827
ENSONIG00000011542	-	90	40.816	ENSONIG00000018673	rab18b	71	40.816
ENSONIG00000011542	-	98	30.723	ENSONIG00000003031	rasl11b	67	30.723
ENSONIG00000011542	-	99	33.750	ENSONIG00000014099	rab14	74	33.750
ENSONIG00000011542	-	98	37.107	ENSONIG00000016776	RAB17	87	36.478
ENSONIG00000011542	-	99	43.478	ENSONIG00000002774	RAB41	76	43.478
ENSONIG00000011542	-	73	31.496	ENSONIG00000003403	ARL4D	60	31.496
ENSONIG00000011542	-	97	37.342	ENSONIG00000018469	rab12	65	37.342
ENSONIG00000011542	-	99	35.000	ENSONIG00000000558	-	74	35.000
ENSONIG00000011542	-	99	32.727	ENSONIG00000020945	-	81	32.727
ENSONIG00000011542	-	99	40.994	ENSONIG00000005708	rab30	79	40.994
ENSONIG00000011542	-	99	43.750	ENSONIG00000009886	rab6bb	77	43.750
ENSONIG00000011542	-	93	37.086	ENSONIG00000002410	rab25a	72	37.086
ENSONIG00000011542	-	98	39.623	ENSONIG00000016279	-	72	39.623
ENSONIG00000011542	-	99	38.509	ENSONIG00000006819	-	79	38.509
ENSONIG00000011542	-	98	36.025	ENSONIG00000006997	-	76	36.025
ENSONIG00000011542	-	99	42.500	ENSONIG00000004394	rab6a	77	42.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000011542	-	96	52.258	ENSACAG00000016658	-	82	52.258	Anolis_carolinensis
ENSONIG00000011542	-	83	49.306	ENSETEG00000008991	-	94	49.306	Echinops_telfairi
ENSONIG00000011542	-	100	53.704	ENSFALG00000003276	-	77	53.704	Ficedula_albicollis
ENSONIG00000011542	-	100	83.951	ENSGMOG00000018741	-	76	83.951	Gadus_morhua
ENSONIG00000011542	-	100	91.975	ENSGACG00000019767	-	82	91.975	Gasterosteus_aculeatus
ENSONIG00000011542	-	94	52.288	ENSLAFG00000000202	-	87	52.288	Loxodonta_africana
ENSONIG00000011542	-	100	53.086	ENSMGAG00000002516	-	72	53.086	Meleagris_gallopavo
ENSONIG00000011542	-	100	51.852	ENSMUSG00000064147	Rab44	62	51.852	Mus_musculus
ENSONIG00000011542	-	100	51.235	ENSMPUG00000014188	-	66	51.235	Mustela_putorius_furo
ENSONIG00000011542	-	83	54.074	ENSMLUG00000010706	-	75	54.074	Myotis_lucifugus
ENSONIG00000011542	-	83	53.147	ENSMEUG00000004712	-	95	53.147	Notamacropus_eugenii
ENSONIG00000011542	-	63	47.273	ENSOPRG00000006034	-	92	47.273	Ochotona_princeps
ENSONIG00000011542	-	94	58.553	ENSPSIG00000002522	-	98	58.553	Pelodiscus_sinensis
ENSONIG00000011542	-	83	51.748	ENSPVAG00000014624	-	93	51.748	Pteropus_vampyrus
ENSONIG00000011542	-	100	54.321	ENSTGUG00000017468	-	77	54.321	Taeniopygia_guttata
ENSONIG00000011542	-	100	67.284	ENSTNIG00000008784	-	100	67.284	Tetraodon_nigroviridis
ENSONIG00000011542	-	99	92.547	ENSTNIG00000001448	-	96	92.547	Tetraodon_nigroviridis