EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000011692 (Gene tree)
Gene ID: 100694284
Gene Symbol: slirp
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 3137 bases
Position: chrGL831368.1:453906-457042
Accession: 100694284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000014723	RRM_1	PF00076.22	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000014735	-	1346	-	ENSONIP00000014723	99 (aa)	XP_003457243	I3K0S8

Gene Model

Click here to download ENSONIG00000011692's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000011692's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000011692	slirp	87	30.864	ENSONIG00000015390	hnrnpd	53	30.864
ENSONIG00000011692	slirp	75	32.432	ENSONIG00000005302	-	54	32.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000011692	slirp	86	56.471	ENSG00000119705	SLIRP	92	60.000	Homo_sapiens
ENSONIG00000011692	slirp	99	83.673	ENSAPOG00000001298	slirp	98	83.673	Acanthochromis_polyacanthus
ENSONIG00000011692	slirp	71	57.143	ENSAMEG00000003975	SLIRP	77	57.143	Ailuropoda_melanoleuca
ENSONIG00000011692	slirp	100	87.879	ENSACIG00000023083	slirp	98	87.879	Amphilophus_citrinellus
ENSONIG00000011692	slirp	100	85.859	ENSAOCG00000006342	slirp	100	85.859	Amphiprion_ocellaris
ENSONIG00000011692	slirp	99	85.714	ENSAPEG00000015719	-	100	85.714	Amphiprion_percula
ENSONIG00000011692	slirp	100	85.859	ENSAPEG00000015917	slirp	100	85.859	Amphiprion_percula
ENSONIG00000011692	slirp	99	77.551	ENSATEG00000013525	slirp	98	77.551	Anabas_testudineus
ENSONIG00000011692	slirp	97	64.583	ENSAMXG00000018693	slirp	96	64.583	Astyanax_mexicanus
ENSONIG00000011692	slirp	75	59.459	ENSCJAG00000016946	SLIRP	72	58.209	Callithrix_jacchus
ENSONIG00000011692	slirp	89	54.444	ENSCAFG00020015876	-	81	54.444	Canis_lupus_dingo
ENSONIG00000011692	slirp	75	58.108	ENSCCAG00000030130	SLIRP	69	58.108	Cebus_capucinus
ENSONIG00000011692	slirp	86	54.023	ENSCATG00000036327	SLIRP	80	54.023	Cercocebus_atys
ENSONIG00000011692	slirp	89	51.136	ENSCSAG00000011736	SLIRP	65	61.972	Chlorocebus_sabaeus
ENSONIG00000011692	slirp	80	64.557	ENSCPBG00000026327	SLIRP	80	64.557	Chrysemys_picta_bellii
ENSONIG00000011692	slirp	68	64.179	ENSCANG00000032892	SLIRP	68	64.179	Colobus_angolensis_palliatus
ENSONIG00000011692	slirp	89	50.000	ENSCGRG00001024068	Slirp	81	50.000	Cricetulus_griseus_chok1gshd
ENSONIG00000011692	slirp	89	50.000	ENSCGRG00000017440	Slirp	81	50.000	Cricetulus_griseus_crigri
ENSONIG00000011692	slirp	83	60.976	ENSCSEG00000015766	slirp	84	60.976	Cynoglossus_semilaevis
ENSONIG00000011692	slirp	89	80.682	ENSCVAG00000012504	slirp	84	80.682	Cyprinodon_variegatus
ENSONIG00000011692	slirp	95	78.723	ENSDARG00000097753	slirp	93	79.167	Danio_rerio
ENSONIG00000011692	slirp	86	47.674	ENSDNOG00000007721	SLIRP	78	47.674	Dasypus_novemcinctus
ENSONIG00000011692	slirp	86	52.874	ENSDORG00000012379	Slirp	78	52.874	Dipodomys_ordii
ENSONIG00000011692	slirp	89	52.273	ENSETEG00000010345	SLIRP	81	51.685	Echinops_telfairi
ENSONIG00000011692	slirp	86	57.471	ENSEASG00005020193	SLIRP	78	57.471	Equus_asinus_asinus
ENSONIG00000011692	slirp	88	53.409	ENSEEUG00000007257	SLIRP	87	53.409	Erinaceus_europaeus
ENSONIG00000011692	slirp	96	76.842	ENSELUG00000016800	slirp	94	76.842	Esox_lucius
ENSONIG00000011692	slirp	77	57.895	ENSFCAG00000036326	SLIRP	76	57.895	Felis_catus
ENSONIG00000011692	slirp	79	57.692	ENSFALG00000012583	SLIRP	85	52.222	Ficedula_albicollis
ENSONIG00000011692	slirp	86	57.471	ENSFDAG00000008347	SLIRP	77	57.471	Fukomys_damarensis
ENSONIG00000011692	slirp	81	82.500	ENSFHEG00000004709	slirp	87	82.500	Fundulus_heteroclitus
ENSONIG00000011692	slirp	97	75.000	ENSGMOG00000016948	slirp	92	75.000	Gadus_morhua
ENSONIG00000011692	slirp	93	54.255	ENSGALG00000031238	SLIRP	95	54.255	Gallus_gallus
ENSONIG00000011692	slirp	99	76.531	ENSGAFG00000010998	slirp	98	76.531	Gambusia_affinis
ENSONIG00000011692	slirp	79	82.051	ENSGACG00000020137	slirp	91	82.051	Gasterosteus_aculeatus
ENSONIG00000011692	slirp	94	61.702	ENSGAGG00000009953	SLIRP	65	61.702	Gopherus_agassizii
ENSONIG00000011692	slirp	86	56.471	ENSGGOG00000011059	-	78	55.814	Gorilla_gorilla
ENSONIG00000011692	slirp	89	51.111	ENSHGLG00000018491	SLIRP	81	51.111	Heterocephalus_glaber_female
ENSONIG00000011692	slirp	89	51.111	ENSHGLG00100014153	SLIRP	81	51.111	Heterocephalus_glaber_male
ENSONIG00000011692	slirp	95	79.787	ENSHCOG00000006795	slirp	95	79.787	Hippocampus_comes
ENSONIG00000011692	slirp	97	79.167	ENSIPUG00000010214	SLIRP	96	79.167	Ictalurus_punctatus
ENSONIG00000011692	slirp	89	52.222	ENSSTOG00000034316	SLIRP	82	51.648	Ictidomys_tridecemlineatus
ENSONIG00000011692	slirp	99	70.408	ENSKMAG00000002038	slirp	94	70.408	Kryptolebias_marmoratus
ENSONIG00000011692	slirp	99	71.429	ENSLBEG00000007564	slirp	98	71.429	Labrus_bergylta
ENSONIG00000011692	slirp	96	72.632	ENSLACG00000013434	SLIRP	91	72.632	Latimeria_chalumnae
ENSONIG00000011692	slirp	89	51.136	ENSMFAG00000042960	SLIRP	72	61.194	Macaca_fascicularis
ENSONIG00000011692	slirp	86	54.118	ENSMMUG00000029256	SLIRP	72	61.194	Macaca_mulatta
ENSONIG00000011692	slirp	89	51.136	ENSMNEG00000028921	SLIRP	72	61.194	Macaca_nemestrina
ENSONIG00000011692	slirp	88	52.874	ENSMLEG00000043644	SLIRP	68	61.194	Mandrillus_leucophaeus
ENSONIG00000011692	slirp	100	98.990	ENSMZEG00005004617	slirp	100	98.990	Maylandia_zebra
ENSONIG00000011692	slirp	89	51.111	ENSMAUG00000003857	Slirp	81	51.111	Mesocricetus_auratus
ENSONIG00000011692	slirp	89	50.562	ENSMICG00000012080	SLIRP	80	50.562	Microcebus_murinus
ENSONIG00000011692	slirp	72	57.746	ENSMOCG00000016019	Slirp	69	55.714	Microtus_ochrogaster
ENSONIG00000011692	slirp	99	85.714	ENSMMOG00000018268	slirp	98	85.714	Mola_mola
ENSONIG00000011692	slirp	71	58.571	ENSMODG00000005207	-	99	58.571	Monodelphis_domestica
ENSONIG00000011692	slirp	98	78.351	ENSMALG00000012581	slirp	97	78.351	Monopterus_albus
ENSONIG00000011692	slirp	87	52.273	MGP_CAROLIEiJ_G0017995	Slirp	81	52.273	Mus_caroli
ENSONIG00000011692	slirp	87	52.273	ENSMUSG00000021040	Slirp	79	52.273	Mus_musculus
ENSONIG00000011692	slirp	87	52.273	MGP_SPRETEiJ_G0018840	Slirp	79	52.273	Mus_spretus
ENSONIG00000011692	slirp	99	51.000	ENSMLUG00000029544	-	81	54.444	Myotis_lucifugus
ENSONIG00000011692	slirp	89	54.545	ENSMLUG00000024998	-	79	54.545	Myotis_lucifugus
ENSONIG00000011692	slirp	86	49.425	ENSNGAG00000016363	Slirp	84	49.425	Nannospalax_galili
ENSONIG00000011692	slirp	90	47.191	ENSNLEG00000032459	-	82	47.191	Nomascus_leucogenys
ENSONIG00000011692	slirp	90	47.191	ENSNLEG00000027238	-	80	55.714	Nomascus_leucogenys
ENSONIG00000011692	slirp	86	55.172	ENSODEG00000012580	SLIRP	76	60.000	Octodon_degus
ENSONIG00000011692	slirp	90	57.143	ENSOANG00000022366	SLIRP	82	57.143	Ornithorhynchus_anatinus
ENSONIG00000011692	slirp	99	85.714	ENSORLG00000010761	slirp	76	85.714	Oryzias_latipes
ENSONIG00000011692	slirp	99	84.694	ENSORLG00020022188	slirp	98	84.694	Oryzias_latipes_hni
ENSONIG00000011692	slirp	99	85.714	ENSORLG00015020171	slirp	97	85.714	Oryzias_latipes_hsok
ENSONIG00000011692	slirp	99	84.694	ENSOMEG00000019321	slirp	98	84.694	Oryzias_melastigma
ENSONIG00000011692	slirp	89	51.136	ENSPPAG00000040710	-	72	61.194	Pan_paniscus
ENSONIG00000011692	slirp	77	57.895	ENSPPRG00000014350	SLIRP	76	57.895	Panthera_pardus
ENSONIG00000011692	slirp	77	57.895	ENSPTIG00000014196	SLIRP	76	57.895	Panthera_tigris_altaica
ENSONIG00000011692	slirp	86	56.471	ENSPTRG00000030691	SLIRP	79	56.471	Pan_troglodytes
ENSONIG00000011692	slirp	86	55.172	ENSPANG00000026323	SLIRP	80	55.172	Papio_anubis
ENSONIG00000011692	slirp	67	71.212	ENSPKIG00000008831	slirp	65	71.212	Paramormyrops_kingsleyae
ENSONIG00000011692	slirp	79	84.615	ENSPMGG00000010541	slirp	90	84.615	Periophthalmus_magnuspinnatus
ENSONIG00000011692	slirp	72	54.930	ENSPEMG00000013234	Slirp	69	52.857	Peromyscus_maniculatus_bairdii
ENSONIG00000011692	slirp	80	58.228	ENSPMAG00000009355	slirp	88	58.228	Petromyzon_marinus
ENSONIG00000011692	slirp	79	52.564	ENSPCIG00000026842	-	84	52.564	Phascolarctos_cinereus
ENSONIG00000011692	slirp	98	77.320	ENSPFOG00000006758	slirp	97	77.320	Poecilia_formosa
ENSONIG00000011692	slirp	98	78.351	ENSPLAG00000011140	slirp	97	78.351	Poecilia_latipinna
ENSONIG00000011692	slirp	98	77.320	ENSPMEG00000019535	slirp	97	77.320	Poecilia_mexicana
ENSONIG00000011692	slirp	98	77.320	ENSPREG00000011673	slirp	97	77.320	Poecilia_reticulata
ENSONIG00000011692	slirp	86	57.471	ENSPPYG00000006030	SLIRP	80	57.471	Pongo_abelii
ENSONIG00000011692	slirp	89	47.727	ENSPCOG00000015159	SLIRP	80	47.727	Propithecus_coquereli
ENSONIG00000011692	slirp	97	79.167	ENSPNAG00000008633	slirp	97	79.167	Pygocentrus_nattereri
ENSONIG00000011692	slirp	75	62.162	ENSRBIG00000032222	-	72	62.687	Rhinopithecus_bieti
ENSONIG00000011692	slirp	75	56.757	ENSRBIG00000035817	-	68	56.757	Rhinopithecus_bieti
ENSONIG00000011692	slirp	68	61.194	ENSRBIG00000032998	-	62	61.194	Rhinopithecus_bieti
ENSONIG00000011692	slirp	66	63.077	ENSRBIG00000031396	-	65	63.077	Rhinopithecus_bieti
ENSONIG00000011692	slirp	66	64.615	ENSRROG00000035604	-	65	64.615	Rhinopithecus_roxellana
ENSONIG00000011692	slirp	72	63.380	ENSRROG00000041312	-	70	63.380	Rhinopithecus_roxellana
ENSONIG00000011692	slirp	75	62.162	ENSRROG00000036656	-	72	62.687	Rhinopithecus_roxellana
ENSONIG00000011692	slirp	68	62.687	ENSRROG00000017133	-	70	62.687	Rhinopithecus_roxellana
ENSONIG00000011692	slirp	82	54.321	ENSSBOG00000020014	SLIRP	78	57.333	Saimiri_boliviensis_boliviensis
ENSONIG00000011692	slirp	84	68.675	ENSSFOG00015011165	slirp	84	68.675	Scleropages_formosus
ENSONIG00000011692	slirp	99	53.000	ENSSMAG00000012930	slirp	98	53.000	Scophthalmus_maximus
ENSONIG00000011692	slirp	99	84.694	ENSSDUG00000021883	slirp	64	84.694	Seriola_dumerili
ENSONIG00000011692	slirp	99	84.694	ENSSLDG00000023136	slirp	89	84.694	Seriola_lalandi_dorsalis
ENSONIG00000011692	slirp	87	64.773	ENSSPUG00000009346	SLIRP	90	64.773	Sphenodon_punctatus
ENSONIG00000011692	slirp	99	67.347	ENSSPAG00000013477	slirp	98	67.347	Stegastes_partitus
ENSONIG00000011692	slirp	89	54.444	ENSSSCG00000028167	SLIRP	81	54.444	Sus_scrofa
ENSONIG00000011692	slirp	79	58.974	ENSTGUG00000012337	SLIRP	83	54.545	Taeniopygia_guttata
ENSONIG00000011692	slirp	97	75.258	ENSTRUG00000020127	slirp	96	75.258	Takifugu_rubripes
ENSONIG00000011692	slirp	89	55.556	ENSUAMG00000022445	SLIRP	81	55.556	Ursus_americanus
ENSONIG00000011692	slirp	89	54.444	ENSUMAG00000007166	SLIRP	81	54.444	Ursus_maritimus
ENSONIG00000011692	slirp	86	54.651	ENSVPAG00000001781	SLIRP	80	54.651	Vicugna_pacos
ENSONIG00000011692	slirp	88	53.933	ENSVVUG00000004436	SLIRP	78	55.172	Vulpes_vulpes
ENSONIG00000011692	slirp	80	75.949	ENSXETG00000030343	SLIRP	89	75.949	Xenopus_tropicalis
ENSONIG00000011692	slirp	99	77.551	ENSXCOG00000009422	slirp	98	77.551	Xiphophorus_couchianus
ENSONIG00000011692	slirp	99	78.571	ENSXMAG00000015655	slirp	98	78.571	Xiphophorus_maculatus