EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000011702 (Gene tree)
Gene ID: 100697945
Gene Symbol: cpsf6
Alias: -
Full Name: cleavage and polyadenylation specific factor 6
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 6544 bases
Position: chrGL831167.1:3401323-3407866
Accession: 100697945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000014736	RRM_1	PF00076.22	8.9e-07	1	1
ENSONIP00000014735	RRM_1	PF00076.22	9.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000014748	-	1653	-	ENSONIP00000014736	550 (aa)	-	I3K0U1
ENSONIT00000014747	-	1881	-	ENSONIP00000014735	585 (aa)	XP_005451719	I3K0U0

Gene Model

Click here to download ENSONIG00000011702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000011702's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000011702	cpsf6	95	72.982	ENSG00000111605	CPSF6	92	84.884	Homo_sapiens
ENSONIG00000011702	cpsf6	66	75.000	ENSG00000149532	CPSF7	100	49.333	Homo_sapiens
ENSONIG00000011702	cpsf6	100	94.087	ENSACIG00000018413	cpsf6	100	94.087	Amphilophus_citrinellus
ENSONIG00000011702	cpsf6	94	94.231	ENSAOCG00000017865	cpsf6	94	94.423	Amphiprion_ocellaris
ENSONIG00000011702	cpsf6	59	39.375	ENSAOCG00000012357	CPSF7	61	53.448	Amphiprion_ocellaris
ENSONIG00000011702	cpsf6	58	39.873	ENSAPEG00000015375	CPSF7	61	53.448	Amphiprion_percula
ENSONIG00000011702	cpsf6	85	83.784	ENSANAG00000019240	CPSF6	73	84.231	Aotus_nancymaae
ENSONIG00000011702	cpsf6	64	45.729	ENSANAG00000024635	CPSF7	69	50.838	Aotus_nancymaae
ENSONIG00000011702	cpsf6	100	98.464	ENSACLG00000026325	cpsf6	100	98.464	Astatotilapia_calliptera
ENSONIG00000011702	cpsf6	76	91.667	ENSAMXG00000016745	CPSF6	75	91.566	Astyanax_mexicanus
ENSONIG00000011702	cpsf6	95	37.615	ENSBTAG00000015263	CPSF7	71	56.069	Bos_taurus
ENSONIG00000011702	cpsf6	82	83.784	ENSCJAG00000001798	CPSF6	91	84.942	Callithrix_jacchus
ENSONIG00000011702	cpsf6	95	37.454	ENSCJAG00000019282	CPSF7	75	65.649	Callithrix_jacchus
ENSONIG00000011702	cpsf6	95	37.843	ENSCAFG00000016152	CPSF7	71	56.647	Canis_familiaris
ENSONIG00000011702	cpsf6	85	83.784	ENSCAFG00000000424	CPSF6	73	84.231	Canis_familiaris
ENSONIG00000011702	cpsf6	95	37.843	ENSCAFG00020012753	CPSF7	71	56.647	Canis_lupus_dingo
ENSONIG00000011702	cpsf6	95	37.615	ENSCHIG00000014655	CPSF7	71	56.069	Capra_hircus
ENSONIG00000011702	cpsf6	85	83.784	ENSTSYG00000008591	CPSF6	90	84.942	Carlito_syrichta
ENSONIG00000011702	cpsf6	95	37.615	ENSTSYG00000010138	-	71	56.647	Carlito_syrichta
ENSONIG00000011702	cpsf6	87	40.678	ENSCAPG00000006384	CPSF7	68	57.803	Cavia_aperea
ENSONIG00000011702	cpsf6	87	39.192	ENSCPOG00000009980	CPSF7	71	57.803	Cavia_porcellus
ENSONIG00000011702	cpsf6	82	84.942	ENSCCAG00000028149	CPSF6	91	84.231	Cebus_capucinus
ENSONIG00000011702	cpsf6	95	37.431	ENSCCAG00000032367	CPSF7	71	56.069	Cebus_capucinus
ENSONIG00000011702	cpsf6	95	40.678	ENSCATG00000042801	CPSF7	73	56.322	Cercocebus_atys
ENSONIG00000011702	cpsf6	95	72.982	ENSCATG00000039288	CPSF6	91	84.231	Cercocebus_atys
ENSONIG00000011702	cpsf6	87	39.192	ENSCLAG00000003174	CPSF7	71	57.225	Chinchilla_lanigera
ENSONIG00000011702	cpsf6	91	80.517	ENSCLAG00000010149	CPSF6	74	83.846	Chinchilla_lanigera
ENSONIG00000011702	cpsf6	95	37.454	ENSCSAG00000006414	CPSF7	73	56.322	Chlorocebus_sabaeus
ENSONIG00000011702	cpsf6	85	83.784	ENSCANG00000037294	CPSF6	89	84.231	Colobus_angolensis_palliatus
ENSONIG00000011702	cpsf6	65	51.295	ENSCGRG00001020382	Cpsf7	71	57.225	Cricetulus_griseus_chok1gshd
ENSONIG00000011702	cpsf6	93	79.070	ENSCGRG00000016909	Cpsf6	74	84.231	Cricetulus_griseus_crigri
ENSONIG00000011702	cpsf6	96	47.644	ENSCGRG00000017954	Cpsf7	73	57.225	Cricetulus_griseus_crigri
ENSONIG00000011702	cpsf6	94	93.462	ENSCSEG00000008967	cpsf6	95	92.973	Cynoglossus_semilaevis
ENSONIG00000011702	cpsf6	52	40.206	ENSCSEG00000001956	CPSF7	75	40.206	Cynoglossus_semilaevis
ENSONIG00000011702	cpsf6	67	37.019	ENSCVAG00000007392	CPSF7	72	44.828	Cyprinodon_variegatus
ENSONIG00000011702	cpsf6	95	88.829	ENSCVAG00000014857	cpsf6	95	89.550	Cyprinodon_variegatus
ENSONIG00000011702	cpsf6	95	37.615	ENSDNOG00000018517	CPSF7	75	66.412	Dasypus_novemcinctus
ENSONIG00000011702	cpsf6	91	80.716	ENSDORG00000002950	Cpsf6	74	84.231	Dipodomys_ordii
ENSONIG00000011702	cpsf6	65	81.106	ENSETEG00000002097	CPSF6	59	83.243	Echinops_telfairi
ENSONIG00000011702	cpsf6	65	49.490	ENSETEG00000003765	CPSF7	71	56.000	Echinops_telfairi
ENSONIG00000011702	cpsf6	95	37.615	ENSEASG00005008196	CPSF7	71	56.647	Equus_asinus_asinus
ENSONIG00000011702	cpsf6	67	76.250	ENSECAG00000018521	CPSF7	77	66.412	Equus_caballus
ENSONIG00000011702	cpsf6	85	83.784	ENSEEUG00000015039	CPSF6	74	84.231	Erinaceus_europaeus
ENSONIG00000011702	cpsf6	95	37.843	ENSFCAG00000013677	CPSF7	77	66.412	Felis_catus
ENSONIG00000011702	cpsf6	71	48.319	ENSFALG00000011927	CPSF7	76	56.069	Ficedula_albicollis
ENSONIG00000011702	cpsf6	95	41.296	ENSFDAG00000003919	CPSF7	71	57.803	Fukomys_damarensis
ENSONIG00000011702	cpsf6	85	83.398	ENSFDAG00000002281	CPSF6	71	83.846	Fukomys_damarensis
ENSONIG00000011702	cpsf6	95	83.048	ENSFHEG00000019693	cpsf6	95	83.733	Fundulus_heteroclitus
ENSONIG00000011702	cpsf6	53	95.954	ENSGMOG00000012951	cpsf6	53	95.954	Gadus_morhua
ENSONIG00000011702	cpsf6	65	50.259	ENSGALG00000040962	CPSF7	63	56.647	Gallus_gallus
ENSONIG00000011702	cpsf6	94	81.071	ENSGGOG00000008211	CPSF6	91	84.231	Gorilla_gorilla
ENSONIG00000011702	cpsf6	100	98.635	ENSHBUG00000005998	cpsf6	100	98.635	Haplochromis_burtoni
ENSONIG00000011702	cpsf6	68	51.295	ENSHGLG00000019090	-	73	57.803	Heterocephalus_glaber_female
ENSONIG00000011702	cpsf6	95	39.479	ENSHGLG00100013933	-	73	58.382	Heterocephalus_glaber_male
ENSONIG00000011702	cpsf6	85	83.398	ENSHGLG00100013861	CPSF6	74	83.846	Heterocephalus_glaber_male
ENSONIG00000011702	cpsf6	94	90.038	ENSHCOG00000014555	cpsf6	95	86.225	Hippocampus_comes
ENSONIG00000011702	cpsf6	91	80.478	ENSSTOG00000014133	CPSF6	68	84.231	Ictidomys_tridecemlineatus
ENSONIG00000011702	cpsf6	96	47.120	ENSSTOG00000007708	CPSF7	71	56.647	Ictidomys_tridecemlineatus
ENSONIG00000011702	cpsf6	96	47.120	ENSJJAG00000019390	Cpsf7	73	57.225	Jaculus_jaculus
ENSONIG00000011702	cpsf6	91	80.556	ENSJJAG00000014647	Cpsf6	74	84.231	Jaculus_jaculus
ENSONIG00000011702	cpsf6	95	91.171	ENSKMAG00000014794	cpsf6	94	92.308	Kryptolebias_marmoratus
ENSONIG00000011702	cpsf6	57	40.972	ENSLBEG00000000947	CPSF7	73	41.040	Labrus_bergylta
ENSONIG00000011702	cpsf6	95	89.165	ENSLBEG00000015762	cpsf6	95	87.744	Labrus_bergylta
ENSONIG00000011702	cpsf6	93	33.837	ENSLACG00000005542	CPSF7	69	44.872	Latimeria_chalumnae
ENSONIG00000011702	cpsf6	95	69.930	ENSLOCG00000016190	cpsf6	60	90.361	Lepisosteus_oculatus
ENSONIG00000011702	cpsf6	95	37.615	ENSLAFG00000032084	CPSF7	71	58.382	Loxodonta_africana
ENSONIG00000011702	cpsf6	82	85.000	ENSMFAG00000045318	CPSF6	91	84.231	Macaca_fascicularis
ENSONIG00000011702	cpsf6	95	40.678	ENSMFAG00000001401	CPSF7	71	56.069	Macaca_fascicularis
ENSONIG00000011702	cpsf6	94	81.071	ENSMMUG00000002921	CPSF6	91	83.333	Macaca_mulatta
ENSONIG00000011702	cpsf6	95	37.454	ENSMMUG00000015280	CPSF7	73	56.322	Macaca_mulatta
ENSONIG00000011702	cpsf6	95	40.678	ENSMNEG00000029585	CPSF7	73	56.322	Macaca_nemestrina
ENSONIG00000011702	cpsf6	82	83.846	ENSMNEG00000036311	CPSF6	91	84.942	Macaca_nemestrina
ENSONIG00000011702	cpsf6	85	83.784	ENSMLEG00000003957	CPSF6	89	84.231	Mandrillus_leucophaeus
ENSONIG00000011702	cpsf6	95	40.678	ENSMLEG00000031269	CPSF7	69	56.322	Mandrillus_leucophaeus
ENSONIG00000011702	cpsf6	95	90.270	ENSMAMG00000010385	cpsf6	95	87.207	Mastacembelus_armatus
ENSONIG00000011702	cpsf6	100	98.635	ENSMZEG00005007975	cpsf6	100	98.635	Maylandia_zebra
ENSONIG00000011702	cpsf6	96	42.662	ENSMGAG00000004876	CPSF7	62	55.357	Meleagris_gallopavo
ENSONIG00000011702	cpsf6	96	47.120	ENSMAUG00000013020	Cpsf7	71	56.647	Mesocricetus_auratus
ENSONIG00000011702	cpsf6	94	81.071	ENSMICG00000007385	-	91	84.942	Microcebus_murinus
ENSONIG00000011702	cpsf6	95	37.615	ENSMICG00000013788	CPSF7	71	56.647	Microcebus_murinus
ENSONIG00000011702	cpsf6	96	47.120	ENSMOCG00000000072	Cpsf7	71	56.647	Microtus_ochrogaster
ENSONIG00000011702	cpsf6	65	52.041	ENSMODG00000020364	CPSF7	72	56.818	Monodelphis_domestica
ENSONIG00000011702	cpsf6	82	96.018	ENSMALG00000014908	cpsf6	89	96.018	Monopterus_albus
ENSONIG00000011702	cpsf6	96	47.120	MGP_CAROLIEiJ_G0022690	Cpsf7	71	56.647	Mus_caroli
ENSONIG00000011702	cpsf6	96	47.120	ENSMUSG00000034820	Cpsf7	71	56.647	Mus_musculus
ENSONIG00000011702	cpsf6	96	47.120	MGP_PahariEiJ_G0014184	Cpsf7	71	56.647	Mus_pahari
ENSONIG00000011702	cpsf6	96	47.120	MGP_SPRETEiJ_G0023604	Cpsf7	71	56.647	Mus_spretus
ENSONIG00000011702	cpsf6	95	41.341	ENSMPUG00000014163	CPSF7	68	55.491	Mustela_putorius_furo
ENSONIG00000011702	cpsf6	95	37.638	ENSMLUG00000013278	CPSF7	73	56.647	Myotis_lucifugus
ENSONIG00000011702	cpsf6	68	87.770	ENSMLUG00000028728	-	85	80.000	Myotis_lucifugus
ENSONIG00000011702	cpsf6	73	77.297	ENSMLUG00000023960	-	73	77.326	Myotis_lucifugus
ENSONIG00000011702	cpsf6	96	47.120	ENSNGAG00000005031	Cpsf7	71	56.647	Nannospalax_galili
ENSONIG00000011702	cpsf6	100	98.548	ENSNBRG00000004089	cpsf6	100	98.548	Neolamprologus_brichardi
ENSONIG00000011702	cpsf6	95	37.431	ENSNLEG00000002529	CPSF7	65	56.322	Nomascus_leucogenys
ENSONIG00000011702	cpsf6	82	83.846	ENSNLEG00000003798	CPSF6	91	84.942	Nomascus_leucogenys
ENSONIG00000011702	cpsf6	65	50.777	ENSMEUG00000002261	CPSF7	71	56.647	Notamacropus_eugenii
ENSONIG00000011702	cpsf6	85	83.784	ENSOPRG00000005199	CPSF6	74	84.231	Ochotona_princeps
ENSONIG00000011702	cpsf6	97	43.878	ENSODEG00000002610	CPSF7	71	57.386	Octodon_degus
ENSONIG00000011702	cpsf6	70	90.173	ENSODEG00000004418	-	78	89.759	Octodon_degus
ENSONIG00000011702	cpsf6	96	39.726	ENSOCUG00000024726	CPSF7	71	56.069	Oryctolagus_cuniculus
ENSONIG00000011702	cpsf6	77	34.084	ENSORLG00000006495	CPSF7	80	37.624	Oryzias_latipes
ENSONIG00000011702	cpsf6	77	34.084	ENSORLG00020012657	CPSF7	80	37.624	Oryzias_latipes_hni
ENSONIG00000011702	cpsf6	65	35.371	ENSORLG00015011091	CPSF7	57	40.217	Oryzias_latipes_hsok
ENSONIG00000011702	cpsf6	65	37.500	ENSOMEG00000000539	CPSF7	72	40.462	Oryzias_melastigma
ENSONIG00000011702	cpsf6	95	37.615	ENSOGAG00000027958	CPSF7	66	56.897	Otolemur_garnettii
ENSONIG00000011702	cpsf6	65	50.777	ENSOARG00000012937	CPSF7	64	57.225	Ovis_aries
ENSONIG00000011702	cpsf6	85	84.942	ENSOARG00000020532	CPSF6	73	84.615	Ovis_aries
ENSONIG00000011702	cpsf6	95	40.678	ENSPPAG00000028232	CPSF7	69	56.322	Pan_paniscus
ENSONIG00000011702	cpsf6	69	90.964	ENSPPAG00000005301	CPSF6	57	90.964	Pan_paniscus
ENSONIG00000011702	cpsf6	65	50.777	ENSPPRG00000008538	CPSF7	71	57.803	Panthera_pardus
ENSONIG00000011702	cpsf6	85	79.406	ENSPTIG00000004079	CPSF6	52	84.942	Panthera_tigris_altaica
ENSONIG00000011702	cpsf6	95	37.843	ENSPTIG00000021699	CPSF7	71	56.647	Panthera_tigris_altaica
ENSONIG00000011702	cpsf6	95	40.678	ENSPTRG00000003742	CPSF7	71	56.069	Pan_troglodytes
ENSONIG00000011702	cpsf6	94	81.071	ENSPTRG00000005205	CPSF6	91	84.231	Pan_troglodytes
ENSONIG00000011702	cpsf6	74	95.902	ENSPANG00000011641	CPSF6	91	84.231	Papio_anubis
ENSONIG00000011702	cpsf6	95	40.678	ENSPANG00000006037	CPSF7	67	56.069	Papio_anubis
ENSONIG00000011702	cpsf6	61	46.629	ENSPKIG00000018054	CPSF7	75	44.444	Paramormyrops_kingsleyae
ENSONIG00000011702	cpsf6	56	78.788	ENSPSIG00000016360	CPSF6	69	81.203	Pelodiscus_sinensis
ENSONIG00000011702	cpsf6	96	47.120	ENSPEMG00000012648	Cpsf7	73	56.647	Peromyscus_maniculatus_bairdii
ENSONIG00000011702	cpsf6	91	80.517	ENSPEMG00000007973	Cpsf6	74	83.846	Peromyscus_maniculatus_bairdii
ENSONIG00000011702	cpsf6	50	43.151	ENSPMAG00000008077	-	67	48.649	Petromyzon_marinus
ENSONIG00000011702	cpsf6	65	52.041	ENSPCIG00000002551	CPSF7	84	54.749	Phascolarctos_cinereus
ENSONIG00000011702	cpsf6	87	94.792	ENSPFOG00000006990	cpsf6	92	95.135	Poecilia_formosa
ENSONIG00000011702	cpsf6	95	90.450	ENSPLAG00000005715	cpsf6	94	91.538	Poecilia_latipinna
ENSONIG00000011702	cpsf6	95	90.450	ENSPMEG00000001353	cpsf6	94	91.538	Poecilia_mexicana
ENSONIG00000011702	cpsf6	95	90.450	ENSPREG00000004417	cpsf6	95	89.730	Poecilia_reticulata
ENSONIG00000011702	cpsf6	95	37.431	ENSPPYG00000003188	CPSF7	71	56.069	Pongo_abelii
ENSONIG00000011702	cpsf6	94	81.071	ENSPCOG00000024384	CPSF6	91	84.231	Propithecus_coquereli
ENSONIG00000011702	cpsf6	95	37.615	ENSPCOG00000011976	CPSF7	71	56.647	Propithecus_coquereli
ENSONIG00000011702	cpsf6	95	37.431	ENSPVAG00000010675	CPSF7	71	56.647	Pteropus_vampyrus
ENSONIG00000011702	cpsf6	100	98.635	ENSPNYG00000020315	cpsf6	100	98.635	Pundamilia_nyererei
ENSONIG00000011702	cpsf6	58	47.333	ENSPNAG00000015073	CPSF7	69	46.988	Pygocentrus_nattereri
ENSONIG00000011702	cpsf6	95	40.968	ENSRNOG00000020668	Cpsf7	73	56.647	Rattus_norvegicus
ENSONIG00000011702	cpsf6	94	81.071	ENSRBIG00000042827	CPSF6	91	84.231	Rhinopithecus_bieti
ENSONIG00000011702	cpsf6	95	40.678	ENSRBIG00000031429	CPSF7	77	65.649	Rhinopithecus_bieti
ENSONIG00000011702	cpsf6	95	72.982	ENSRROG00000042758	CPSF6	91	84.942	Rhinopithecus_roxellana
ENSONIG00000011702	cpsf6	95	40.678	ENSRROG00000045009	CPSF7	71	56.069	Rhinopithecus_roxellana
ENSONIG00000011702	cpsf6	95	37.431	ENSSBOG00000018431	CPSF7	71	56.069	Saimiri_boliviensis_boliviensis
ENSONIG00000011702	cpsf6	85	84.942	ENSSBOG00000010652	CPSF6	90	84.231	Saimiri_boliviensis_boliviensis
ENSONIG00000011702	cpsf6	63	50.777	ENSSHAG00000011964	CPSF7	68	56.647	Sarcophilus_harrisii
ENSONIG00000011702	cpsf6	96	39.698	ENSSFOG00015010288	cpsf7	70	44.516	Scleropages_formosus
ENSONIG00000011702	cpsf6	55	90.938	ENSSMAG00000000471	cpsf6	95	88.108	Scophthalmus_maximus
ENSONIG00000011702	cpsf6	100	96.915	ENSSDUG00000005024	cpsf6	100	96.915	Seriola_dumerili
ENSONIG00000011702	cpsf6	100	96.915	ENSSLDG00000009042	cpsf6	100	96.915	Seriola_lalandi_dorsalis
ENSONIG00000011702	cpsf6	85	85.490	ENSSARG00000006743	CPSF6	75	88.583	Sorex_araneus
ENSONIG00000011702	cpsf6	65	50.256	ENSSPUG00000019344	CPSF7	73	57.803	Sphenodon_punctatus
ENSONIG00000011702	cpsf6	95	94.595	ENSSPAG00000013906	cpsf6	95	94.775	Stegastes_partitus
ENSONIG00000011702	cpsf6	96	47.120	ENSSSCG00000013083	CPSF7	75	66.412	Sus_scrofa
ENSONIG00000011702	cpsf6	59	50.000	ENSTGUG00000006513	CPSF7	71	53.488	Taeniopygia_guttata
ENSONIG00000011702	cpsf6	57	53.886	ENSTTRG00000011085	CPSF7	69	56.897	Tursiops_truncatus
ENSONIG00000011702	cpsf6	95	41.341	ENSUAMG00000017809	CPSF7	71	56.647	Ursus_americanus
ENSONIG00000011702	cpsf6	85	79.406	ENSUAMG00000023492	CPSF6	52	84.942	Ursus_americanus
ENSONIG00000011702	cpsf6	95	37.868	ENSUMAG00000011825	CPSF7	73	56.897	Ursus_maritimus
ENSONIG00000011702	cpsf6	85	79.406	ENSUMAG00000020779	CPSF6	65	91.515	Ursus_maritimus
ENSONIG00000011702	cpsf6	85	83.784	ENSVPAG00000008469	CPSF6	74	84.231	Vicugna_pacos
ENSONIG00000011702	cpsf6	95	37.500	ENSVVUG00000004939	CPSF7	75	66.412	Vulpes_vulpes
ENSONIG00000011702	cpsf6	97	41.682	ENSXETG00000006715	cpsf7	65	52.353	Xenopus_tropicalis
ENSONIG00000011702	cpsf6	94	90.962	ENSXCOG00000013423	cpsf6	94	91.154	Xiphophorus_couchianus
ENSONIG00000011702	cpsf6	95	90.270	ENSXMAG00000003459	cpsf6	95	89.550	Xiphophorus_maculatus