EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000011799 (Gene tree)
Gene ID: 100698882
Gene Symbol: smn1
Alias: -
Full Name: survival motor neuron protein 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 7239 bases
Position: chrGL831253.1:1229332-1236570
Accession: 100698882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000014853	SMN	PF06003.12	3.6e-113	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000014865	-	2163	-	ENSONIP00000014853	282 (aa)	XP_003452663	I3K158

Gene Model

Click here to download ENSONIG00000011799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000011799's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000011799	smn1	95	52.330	ENSG00000172062	SMN1	93	53.091	Homo_sapiens
ENSONIG00000011799	smn1	95	52.330	ENSG00000205571	SMN2	93	53.091	Homo_sapiens
ENSONIG00000011799	smn1	100	84.099	ENSAPOG00000011324	smn1	100	84.099	Acanthochromis_polyacanthus
ENSONIG00000011799	smn1	95	55.235	ENSAMEG00000003316	-	89	52.297	Ailuropoda_melanoleuca
ENSONIG00000011799	smn1	60	87.574	ENSACIG00000007598	smn1	94	87.574	Amphilophus_citrinellus
ENSONIG00000011799	smn1	93	86.260	ENSACIG00000019772	-	99	86.260	Amphilophus_citrinellus
ENSONIG00000011799	smn1	100	84.099	ENSAOCG00000024444	smn1	100	84.099	Amphiprion_ocellaris
ENSONIG00000011799	smn1	100	84.452	ENSAPEG00000016504	smn1	100	84.452	Amphiprion_percula
ENSONIG00000011799	smn1	95	84.815	ENSATEG00000002182	smn1	82	84.815	Anabas_testudineus
ENSONIG00000011799	smn1	69	48.039	ENSAPLG00000010912	-	96	46.231	Anas_platyrhynchos
ENSONIG00000011799	smn1	98	53.004	ENSACAG00000010017	-	96	52.297	Anolis_carolinensis
ENSONIG00000011799	smn1	95	51.439	ENSANAG00000032133	-	92	51.838	Aotus_nancymaae
ENSONIG00000011799	smn1	98	94.182	ENSACLG00000007308	smn1	92	94.403	Astatotilapia_calliptera
ENSONIG00000011799	smn1	100	65.371	ENSAMXG00000013884	smn1	100	66.549	Astyanax_mexicanus
ENSONIG00000011799	smn1	95	52.941	ENSBTAG00000005743	SMN2	82	47.710	Bos_taurus
ENSONIG00000011799	smn1	95	53.929	ENSCJAG00000016290	-	92	53.521	Callithrix_jacchus
ENSONIG00000011799	smn1	95	53.405	ENSCAFG00000007812	SMN	93	53.069	Canis_familiaris
ENSONIG00000011799	smn1	95	53.405	ENSCAFG00020019229	-	87	53.069	Canis_lupus_dingo
ENSONIG00000011799	smn1	95	52.747	ENSCHIG00000015559	-	53	60.510	Capra_hircus
ENSONIG00000011799	smn1	95	54.874	ENSTSYG00000012058	-	93	51.471	Carlito_syrichta
ENSONIG00000011799	smn1	77	47.111	ENSCAPG00000011021	-	88	42.786	Cavia_aperea
ENSONIG00000011799	smn1	94	52.768	ENSCPOG00000036973	-	91	49.632	Cavia_porcellus
ENSONIG00000011799	smn1	94	52.899	ENSCPOG00000012328	-	92	50.365	Cavia_porcellus
ENSONIG00000011799	smn1	95	51.471	ENSCCAG00000018127	-	92	52.030	Cebus_capucinus
ENSONIG00000011799	smn1	95	54.839	ENSCATG00000037002	-	93	53.506	Cercocebus_atys
ENSONIG00000011799	smn1	94	54.676	ENSCLAG00000000284	-	92	50.719	Chinchilla_lanigera
ENSONIG00000011799	smn1	95	54.412	ENSCSAG00000015688	-	54	64.375	Chlorocebus_sabaeus
ENSONIG00000011799	smn1	61	83.333	ENSCHOG00000007346	-	100	49.402	Choloepus_hoffmanni
ENSONIG00000011799	smn1	96	54.610	ENSCPBG00000010968	-	97	53.409	Chrysemys_picta_bellii
ENSONIG00000011799	smn1	95	49.446	ENSCANG00000033324	-	61	60.000	Colobus_angolensis_palliatus
ENSONIG00000011799	smn1	95	53.137	ENSCANG00000038242	-	94	53.846	Colobus_angolensis_palliatus
ENSONIG00000011799	smn1	95	52.330	ENSCGRG00001017959	-	93	49.640	Cricetulus_griseus_chok1gshd
ENSONIG00000011799	smn1	95	52.330	ENSCGRG00000007698	Smn1	93	49.640	Cricetulus_griseus_crigri
ENSONIG00000011799	smn1	98	67.832	ENSCSEG00000015227	smn1	100	66.316	Cynoglossus_semilaevis
ENSONIG00000011799	smn1	100	80.634	ENSCVAG00000007498	smn1	100	80.634	Cyprinodon_variegatus
ENSONIG00000011799	smn1	100	63.415	ENSDARG00000018494	smn1	100	61.888	Danio_rerio
ENSONIG00000011799	smn1	54	57.516	ENSDNOG00000045949	-	63	57.516	Dasypus_novemcinctus
ENSONIG00000011799	smn1	82	51.037	ENSDNOG00000007283	-	97	49.378	Dasypus_novemcinctus
ENSONIG00000011799	smn1	95	42.652	ENSDORG00000007082	Smn1	91	43.846	Dipodomys_ordii
ENSONIG00000011799	smn1	63	44.444	ENSETEG00000001406	-	90	45.361	Echinops_telfairi
ENSONIG00000011799	smn1	96	39.057	ENSEBUG00000011902	smn1	72	40.097	Eptatretus_burgeri
ENSONIG00000011799	smn1	89	47.490	ENSEASG00005018000	-	89	46.718	Equus_asinus_asinus
ENSONIG00000011799	smn1	95	52.174	ENSECAG00000015215	-	93	51.449	Equus_caballus
ENSONIG00000011799	smn1	88	53.462	ENSEEUG00000015777	-	100	47.328	Erinaceus_europaeus
ENSONIG00000011799	smn1	100	67.021	ENSELUG00000018067	smn1	100	67.021	Esox_lucius
ENSONIG00000011799	smn1	95	54.412	ENSFCAG00000028292	SMN	93	51.661	Felis_catus
ENSONIG00000011799	smn1	95	57.818	ENSFALG00000012320	-	95	53.160	Ficedula_albicollis
ENSONIG00000011799	smn1	95	50.000	ENSFDAG00000017683	-	92	46.014	Fukomys_damarensis
ENSONIG00000011799	smn1	97	80.797	ENSFHEG00000018508	smn1	100	80.797	Fundulus_heteroclitus
ENSONIG00000011799	smn1	100	66.078	ENSGMOG00000017279	smn1	98	66.431	Gadus_morhua
ENSONIG00000011799	smn1	95	51.264	ENSGALG00000002430	SMN	97	50.588	Gallus_gallus
ENSONIG00000011799	smn1	100	81.979	ENSGAFG00000009501	smn1	100	81.979	Gambusia_affinis
ENSONIG00000011799	smn1	100	81.206	ENSGACG00000010584	smn1	97	79.433	Gasterosteus_aculeatus
ENSONIG00000011799	smn1	98	37.281	ENSGAGG00000013639	-	92	36.567	Gopherus_agassizii
ENSONIG00000011799	smn1	96	55.235	ENSGAGG00000011374	-	95	54.122	Gopherus_agassizii
ENSONIG00000011799	smn1	92	51.894	ENSGGOG00000003872	-	93	52.852	Gorilla_gorilla
ENSONIG00000011799	smn1	55	63.125	ENSGGOG00000026704	-	75	63.125	Gorilla_gorilla
ENSONIG00000011799	smn1	100	96.809	ENSHBUG00000013987	smn1	100	96.809	Haplochromis_burtoni
ENSONIG00000011799	smn1	95	48.014	ENSHGLG00000001905	-	94	44.840	Heterocephalus_glaber_female
ENSONIG00000011799	smn1	95	50.362	ENSHGLG00000001018	-	93	47.857	Heterocephalus_glaber_female
ENSONIG00000011799	smn1	93	47.970	ENSHGLG00100018676	-	96	44.727	Heterocephalus_glaber_male
ENSONIG00000011799	smn1	95	50.362	ENSHGLG00100011252	-	93	47.857	Heterocephalus_glaber_male
ENSONIG00000011799	smn1	94	75.849	ENSHCOG00000017136	smn1	89	75.472	Hippocampus_comes
ENSONIG00000011799	smn1	100	66.434	ENSIPUG00000012580	smn1	89	62.587	Ictalurus_punctatus
ENSONIG00000011799	smn1	92	54.887	ENSSTOG00000012288	-	94	55.263	Ictidomys_tridecemlineatus
ENSONIG00000011799	smn1	59	47.904	ENSJJAG00000014853	-	91	45.699	Jaculus_jaculus
ENSONIG00000011799	smn1	100	78.947	ENSKMAG00000007239	smn1	100	79.649	Kryptolebias_marmoratus
ENSONIG00000011799	smn1	100	83.099	ENSLBEG00000022550	smn1	100	83.099	Labrus_bergylta
ENSONIG00000011799	smn1	98	33.444	ENSLACG00000009808	-	56	36.842	Latimeria_chalumnae
ENSONIG00000011799	smn1	97	31.095	ENSLOCG00000000801	-	94	30.851	Lepisosteus_oculatus
ENSONIG00000011799	smn1	100	52.265	ENSLOCG00000011339	smn1	100	55.594	Lepisosteus_oculatus
ENSONIG00000011799	smn1	95	52.381	ENSLAFG00000003425	-	89	51.103	Loxodonta_africana
ENSONIG00000011799	smn1	95	54.779	ENSMFAG00000031523	SMN1	95	54.745	Macaca_fascicularis
ENSONIG00000011799	smn1	95	49.462	ENSMFAG00000008812	-	92	50.883	Macaca_fascicularis
ENSONIG00000011799	smn1	95	54.779	ENSMMUG00000020214	SMN1	92	55.830	Macaca_mulatta
ENSONIG00000011799	smn1	95	48.746	ENSMMUG00000030594	-	92	48.789	Macaca_mulatta
ENSONIG00000011799	smn1	76	41.850	ENSMNEG00000036423	-	70	43.915	Macaca_nemestrina
ENSONIG00000011799	smn1	95	54.779	ENSMNEG00000035094	-	92	55.830	Macaca_nemestrina
ENSONIG00000011799	smn1	95	55.556	ENSMLEG00000041902	-	93	54.244	Mandrillus_leucophaeus
ENSONIG00000011799	smn1	100	84.155	ENSMAMG00000011034	smn1	100	84.155	Mastacembelus_armatus
ENSONIG00000011799	smn1	100	96.454	ENSMZEG00005013634	smn1	100	96.454	Maylandia_zebra
ENSONIG00000011799	smn1	69	51.020	ENSMGAG00000008889	-	95	46.667	Meleagris_gallopavo
ENSONIG00000011799	smn1	95	52.000	ENSMAUG00000010262	Smn1	93	48.921	Mesocricetus_auratus
ENSONIG00000011799	smn1	55	62.500	ENSMICG00000034708	-	72	62.500	Microcebus_murinus
ENSONIG00000011799	smn1	95	54.613	ENSMOCG00000017833	Smn1	93	51.852	Microtus_ochrogaster
ENSONIG00000011799	smn1	96	73.913	ENSMMOG00000005504	smn1	98	70.696	Mola_mola
ENSONIG00000011799	smn1	95	56.364	ENSMODG00000001436	-	92	51.254	Monodelphis_domestica
ENSONIG00000011799	smn1	100	84.155	ENSMALG00000008025	smn1	100	84.155	Monopterus_albus
ENSONIG00000011799	smn1	95	52.158	MGP_CAROLIEiJ_G0018836	Smn1	54	62.179	Mus_caroli
ENSONIG00000011799	smn1	95	51.799	ENSMUSG00000021645	Smn1	93	52.688	Mus_musculus
ENSONIG00000011799	smn1	95	49.821	MGP_PahariEiJ_G0015911	Smn1	93	50.000	Mus_pahari
ENSONIG00000011799	smn1	95	53.597	MGP_SPRETEiJ_G0019718	Smn1	54	61.538	Mus_spretus
ENSONIG00000011799	smn1	93	54.779	ENSMPUG00000014470	-	94	52.941	Mustela_putorius_furo
ENSONIG00000011799	smn1	95	51.228	ENSMLUG00000010603	-	51	62.025	Myotis_lucifugus
ENSONIG00000011799	smn1	95	51.957	ENSNGAG00000019833	Smn1	93	50.185	Nannospalax_galili
ENSONIG00000011799	smn1	100	98.582	ENSNBRG00000023000	smn1	100	98.582	Neolamprologus_brichardi
ENSONIG00000011799	smn1	95	52.143	ENSNLEG00000004454	-	93	53.091	Nomascus_leucogenys
ENSONIG00000011799	smn1	67	53.333	ENSMEUG00000011393	-	88	47.317	Notamacropus_eugenii
ENSONIG00000011799	smn1	88	53.257	ENSOPRG00000002015	-	100	52.964	Ochotona_princeps
ENSONIG00000011799	smn1	91	54.580	ENSODEG00000015976	-	91	53.358	Octodon_degus
ENSONIG00000011799	smn1	95	50.890	ENSOANG00000001626	-	95	52.206	Ornithorhynchus_anatinus
ENSONIG00000011799	smn1	95	54.874	ENSOCUG00000026649	-	92	49.655	Oryctolagus_cuniculus
ENSONIG00000011799	smn1	95	55.147	ENSOCUG00000017097	-	92	49.135	Oryctolagus_cuniculus
ENSONIG00000011799	smn1	95	44.170	ENSOCUG00000025183	-	92	42.599	Oryctolagus_cuniculus
ENSONIG00000011799	smn1	100	80.565	ENSORLG00000010552	smn1	100	80.565	Oryzias_latipes
ENSONIG00000011799	smn1	100	74.296	ENSORLG00020007936	smn1	100	74.296	Oryzias_latipes_hni
ENSONIG00000011799	smn1	100	80.212	ENSORLG00015022425	smn1	100	80.212	Oryzias_latipes_hsok
ENSONIG00000011799	smn1	100	79.859	ENSOMEG00000007824	smn1	100	79.859	Oryzias_melastigma
ENSONIG00000011799	smn1	92	47.312	ENSOGAG00000031414	-	92	47.464	Otolemur_garnettii
ENSONIG00000011799	smn1	94	52.045	ENSOARG00000005425	-	56	58.065	Ovis_aries
ENSONIG00000011799	smn1	95	52.330	ENSPPAG00000036640	-	93	53.091	Pan_paniscus
ENSONIG00000011799	smn1	95	54.412	ENSPPRG00000005575	-	93	51.661	Panthera_pardus
ENSONIG00000011799	smn1	95	54.412	ENSPTIG00000007745	-	93	51.292	Panthera_tigris_altaica
ENSONIG00000011799	smn1	95	53.901	ENSPTRG00000016955	-	92	52.747	Pan_troglodytes
ENSONIG00000011799	smn1	95	50.185	ENSPANG00000000253	-	91	50.185	Papio_anubis
ENSONIG00000011799	smn1	95	54.779	ENSPANG00000013601	-	92	55.830	Papio_anubis
ENSONIG00000011799	smn1	100	59.655	ENSPKIG00000011096	smn1	100	59.930	Paramormyrops_kingsleyae
ENSONIG00000011799	smn1	92	53.333	ENSPSIG00000014787	-	86	53.846	Pelodiscus_sinensis
ENSONIG00000011799	smn1	100	72.028	ENSPMGG00000012285	smn1	97	73.358	Periophthalmus_magnuspinnatus
ENSONIG00000011799	smn1	95	56.364	ENSPCIG00000025764	-	93	53.091	Phascolarctos_cinereus
ENSONIG00000011799	smn1	100	81.979	ENSPFOG00000007786	smn1	100	81.979	Poecilia_formosa
ENSONIG00000011799	smn1	100	82.332	ENSPLAG00000012071	smn1	100	82.332	Poecilia_latipinna
ENSONIG00000011799	smn1	100	81.979	ENSPMEG00000017085	smn1	100	81.979	Poecilia_mexicana
ENSONIG00000011799	smn1	100	81.625	ENSPREG00000005824	smn1	100	81.625	Poecilia_reticulata
ENSONIG00000011799	smn1	91	51.111	ENSPPYG00000015533	-	95	51.825	Pongo_abelii
ENSONIG00000011799	smn1	59	76.923	ENSPPYG00000019189	-	74	50.345	Pongo_abelii
ENSONIG00000011799	smn1	91	52.652	ENSPCAG00000004187	-	97	50.758	Procavia_capensis
ENSONIG00000011799	smn1	63	53.591	ENSPCOG00000022307	-	65	61.806	Propithecus_coquereli
ENSONIG00000011799	smn1	95	53.405	ENSPVAG00000005977	-	92	52.399	Pteropus_vampyrus
ENSONIG00000011799	smn1	100	98.582	ENSPNYG00000014148	smn1	100	98.582	Pundamilia_nyererei
ENSONIG00000011799	smn1	100	67.368	ENSPNAG00000014007	smn1	87	63.158	Pygocentrus_nattereri
ENSONIG00000011799	smn1	95	51.971	ENSRNOG00000018067	Smn1	93	49.281	Rattus_norvegicus
ENSONIG00000011799	smn1	98	49.643	ENSRBIG00000036775	-	94	49.286	Rhinopithecus_bieti
ENSONIG00000011799	smn1	95	54.412	ENSRBIG00000037052	-	91	53.506	Rhinopithecus_bieti
ENSONIG00000011799	smn1	95	51.111	ENSRROG00000031088	-	91	52.107	Rhinopithecus_roxellana
ENSONIG00000011799	smn1	95	54.412	ENSRROG00000039399	-	91	53.506	Rhinopithecus_roxellana
ENSONIG00000011799	smn1	95	53.676	ENSSBOG00000011665	-	91	53.506	Saimiri_boliviensis_boliviensis
ENSONIG00000011799	smn1	61	54.802	ENSSBOG00000020112	-	52	60.667	Saimiri_boliviensis_boliviensis
ENSONIG00000011799	smn1	95	56.250	ENSSHAG00000001499	-	97	50.549	Sarcophilus_harrisii
ENSONIG00000011799	smn1	100	60.900	ENSSFOG00015015507	smn1	100	56.944	Scleropages_formosus
ENSONIG00000011799	smn1	100	77.739	ENSSMAG00000007922	smn1	100	80.212	Scophthalmus_maximus
ENSONIG00000011799	smn1	100	88.028	ENSSDUG00000018533	smn1	100	88.028	Seriola_dumerili
ENSONIG00000011799	smn1	100	88.380	ENSSLDG00000021135	smn1	100	88.380	Seriola_lalandi_dorsalis
ENSONIG00000011799	smn1	96	57.343	ENSSPUG00000000373	-	98	55.088	Sphenodon_punctatus
ENSONIG00000011799	smn1	100	84.099	ENSSPAG00000004345	smn1	100	84.099	Stegastes_partitus
ENSONIG00000011799	smn1	95	42.435	ENSSSCG00000029127	-	75	71.875	Sus_scrofa
ENSONIG00000011799	smn1	95	54.317	ENSSSCG00000016970	-	92	53.957	Sus_scrofa
ENSONIG00000011799	smn1	92	52.364	ENSTGUG00000001548	-	96	49.442	Taeniopygia_guttata
ENSONIG00000011799	smn1	100	70.213	ENSTRUG00000000736	smn	100	73.498	Takifugu_rubripes
ENSONIG00000011799	smn1	100	68.858	ENSTNIG00000009892	smn1	100	70.934	Tetraodon_nigroviridis
ENSONIG00000011799	smn1	55	63.522	ENSTBEG00000002399	-	87	58.564	Tupaia_belangeri
ENSONIG00000011799	smn1	55	63.924	ENSTTRG00000005080	-	54	63.924	Tursiops_truncatus
ENSONIG00000011799	smn1	55	64.557	ENSUAMG00000024947	-	58	64.557	Ursus_americanus
ENSONIG00000011799	smn1	95	55.957	ENSUMAG00000007842	-	69	56.679	Ursus_maritimus
ENSONIG00000011799	smn1	92	50.000	ENSVPAG00000009887	-	61	86.957	Vicugna_pacos
ENSONIG00000011799	smn1	95	53.405	ENSVVUG00000006934	-	93	53.069	Vulpes_vulpes
ENSONIG00000011799	smn1	87	34.866	ENSXETG00000004912	-	80	61.017	Xenopus_tropicalis
ENSONIG00000011799	smn1	98	56.294	ENSXETG00000018189	smn2	95	52.982	Xenopus_tropicalis
ENSONIG00000011799	smn1	100	81.625	ENSXMAG00000001521	smn1	100	81.625	Xiphophorus_maculatus