EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000011838 (Gene tree)
Gene ID: 100691944
Gene Symbol: rbm17
Alias: -
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 15680 bases
Position: chrGL831319.1:399626-415305
Accession: ZDB-GENE-040426-817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000014906	RRM_1	PF00076.22	2.9e-05	1	1
ENSONIP00000014905	RRM_1	PF00076.22	3.1e-05	1	1
ENSONIP00000014906	G-patch	PF01585.23	3.5e-13	1	1
ENSONIP00000014905	G-patch	PF01585.23	3.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000014918	-	1221	-	ENSONIP00000014906	406 (aa)	-	I3K1B1
ENSONIT00000014917	-	1257	-	ENSONIP00000014905	418 (aa)	-	I3K1B0

Gene Model

Click here to download ENSONIG00000011838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000011838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000011838	rbm17	100	83.292	ENSG00000134453	RBM17	100	83.292	Homo_sapiens
ENSONIG00000011838	rbm17	99	96.766	ENSAPOG00000007101	rbm17	99	96.766	Acanthochromis_polyacanthus
ENSONIG00000011838	rbm17	100	83.538	ENSAMEG00000002107	RBM17	100	83.538	Ailuropoda_melanoleuca
ENSONIG00000011838	rbm17	100	95.086	ENSACIG00000006251	rbm17	100	95.086	Amphilophus_citrinellus
ENSONIG00000011838	rbm17	100	96.798	ENSAOCG00000014892	rbm17	100	96.798	Amphiprion_ocellaris
ENSONIG00000011838	rbm17	100	96.798	ENSAPEG00000022779	rbm17	100	96.798	Amphiprion_percula
ENSONIG00000011838	rbm17	100	90.499	ENSATEG00000004406	rbm17	100	90.499	Anabas_testudineus
ENSONIG00000011838	rbm17	100	84.521	ENSAPLG00000004190	RBM17	100	84.521	Anas_platyrhynchos
ENSONIG00000011838	rbm17	89	81.117	ENSACAG00000005418	RBM17	99	81.117	Anolis_carolinensis
ENSONIG00000011838	rbm17	100	71.951	ENSANAG00000019330	-	95	87.069	Aotus_nancymaae
ENSONIG00000011838	rbm17	100	83.784	ENSANAG00000030127	RBM17	98	88.430	Aotus_nancymaae
ENSONIG00000011838	rbm17	100	94.828	ENSACLG00000003928	rbm17	100	94.828	Astatotilapia_calliptera
ENSONIG00000011838	rbm17	100	83.886	ENSAMXG00000005853	rbm17	100	85.308	Astyanax_mexicanus
ENSONIG00000011838	rbm17	100	83.538	ENSBTAG00000021951	RBM17	100	83.538	Bos_taurus
ENSONIG00000011838	rbm17	100	82.310	ENSBTAG00000011094	-	100	82.310	Bos_taurus
ENSONIG00000011838	rbm17	97	31.643	WBGene00010233	F58B3.7	97	31.159	Caenorhabditis_elegans
ENSONIG00000011838	rbm17	100	83.784	ENSCJAG00000020573	RBM17	100	83.784	Callithrix_jacchus
ENSONIG00000011838	rbm17	100	83.538	ENSCAFG00000005206	RBM17	100	83.538	Canis_familiaris
ENSONIG00000011838	rbm17	100	79.115	ENSCAFG00020005420	RBM17	100	79.115	Canis_lupus_dingo
ENSONIG00000011838	rbm17	100	81.327	ENSCHIG00000019921	-	100	81.327	Capra_hircus
ENSONIG00000011838	rbm17	100	83.538	ENSCHIG00000023204	-	100	83.538	Capra_hircus
ENSONIG00000011838	rbm17	100	82.927	ENSTSYG00000001165	RBM17	99	89.831	Carlito_syrichta
ENSONIG00000011838	rbm17	96	63.613	ENSCAPG00000006275	RBM17	100	66.307	Cavia_aperea
ENSONIG00000011838	rbm17	100	78.398	ENSCPOG00000005679	RBM17	100	78.398	Cavia_porcellus
ENSONIG00000011838	rbm17	100	83.784	ENSCCAG00000018655	RBM17	98	88.430	Cebus_capucinus
ENSONIG00000011838	rbm17	100	83.292	ENSCATG00000041566	RBM17	95	90.678	Cercocebus_atys
ENSONIG00000011838	rbm17	100	82.683	ENSCLAG00000012195	RBM17	99	82.683	Chinchilla_lanigera
ENSONIG00000011838	rbm17	100	83.292	ENSCSAG00000013564	RBM17	100	83.292	Chlorocebus_sabaeus
ENSONIG00000011838	rbm17	92	66.223	ENSCHOG00000005131	RBM17	100	66.223	Choloepus_hoffmanni
ENSONIG00000011838	rbm17	100	84.029	ENSCPBG00000019836	RBM17	100	84.029	Chrysemys_picta_bellii
ENSONIG00000011838	rbm17	100	45.803	ENSCSAVG00000008782	-	100	44.686	Ciona_savignyi
ENSONIG00000011838	rbm17	98	74.495	ENSCANG00000023715	-	99	74.495	Colobus_angolensis_palliatus
ENSONIG00000011838	rbm17	100	83.047	ENSCANG00000030987	RBM17	95	90.678	Colobus_angolensis_palliatus
ENSONIG00000011838	rbm17	100	82.927	ENSCGRG00001013842	Rbm17	100	82.927	Cricetulus_griseus_chok1gshd
ENSONIG00000011838	rbm17	100	65.526	ENSCGRG00001009256	-	100	64.303	Cricetulus_griseus_chok1gshd
ENSONIG00000011838	rbm17	100	82.927	ENSCGRG00000006907	Rbm17	100	82.927	Cricetulus_griseus_crigri
ENSONIG00000011838	rbm17	100	88.571	ENSCSEG00000018164	rbm17	100	88.571	Cynoglossus_semilaevis
ENSONIG00000011838	rbm17	100	86.946	ENSCVAG00000002476	rbm17	100	86.585	Cyprinodon_variegatus
ENSONIG00000011838	rbm17	100	80.569	ENSDARG00000031346	rbm17	100	80.569	Danio_rerio
ENSONIG00000011838	rbm17	100	83.292	ENSDNOG00000035920	RBM17	100	83.292	Dasypus_novemcinctus
ENSONIG00000011838	rbm17	99	36.703	FBgn0086683	Spf45	99	37.376	Drosophila_melanogaster
ENSONIG00000011838	rbm17	85	85.308	ENSETEG00000006642	RBM17	85	86.058	Echinops_telfairi
ENSONIG00000011838	rbm17	63	69.048	ENSEBUG00000010253	rbm17	84	69.048	Eptatretus_burgeri
ENSONIG00000011838	rbm17	100	78.345	ENSEASG00005019205	-	100	77.372	Equus_asinus_asinus
ENSONIG00000011838	rbm17	92	80.585	ENSEASG00005009236	-	100	80.585	Equus_asinus_asinus
ENSONIG00000011838	rbm17	100	70.516	ENSECAG00000008939	RBM17	100	71.499	Equus_caballus
ENSONIG00000011838	rbm17	100	73.710	ENSECAG00000001379	-	100	73.710	Equus_caballus
ENSONIG00000011838	rbm17	86	66.286	ENSEEUG00000013077	RBM17	100	64.571	Erinaceus_europaeus
ENSONIG00000011838	rbm17	100	85.082	ENSELUG00000006440	rbm17	100	85.082	Esox_lucius
ENSONIG00000011838	rbm17	100	83.538	ENSFCAG00000031988	RBM17	100	83.538	Felis_catus
ENSONIG00000011838	rbm17	100	83.538	ENSFALG00000001790	RBM17	100	83.538	Ficedula_albicollis
ENSONIG00000011838	rbm17	100	82.683	ENSFDAG00000007470	RBM17	100	82.683	Fukomys_damarensis
ENSONIG00000011838	rbm17	100	89.549	ENSFHEG00000001266	rbm17	100	89.163	Fundulus_heteroclitus
ENSONIG00000011838	rbm17	99	82.974	ENSGMOG00000008438	rbm17	100	82.974	Gadus_morhua
ENSONIG00000011838	rbm17	100	84.767	ENSGALG00000006332	RBM17	100	84.767	Gallus_gallus
ENSONIG00000011838	rbm17	100	92.611	ENSGAFG00000019879	rbm17	100	92.611	Gambusia_affinis
ENSONIG00000011838	rbm17	99	92.346	ENSGACG00000019174	rbm17	99	92.346	Gasterosteus_aculeatus
ENSONIG00000011838	rbm17	100	84.029	ENSGAGG00000019906	RBM17	100	84.029	Gopherus_agassizii
ENSONIG00000011838	rbm17	100	98.768	ENSHBUG00000016624	rbm17	100	98.768	Haplochromis_burtoni
ENSONIG00000011838	rbm17	100	82.683	ENSHGLG00000011580	RBM17	100	82.683	Heterocephalus_glaber_female
ENSONIG00000011838	rbm17	100	82.683	ENSHGLG00100010460	RBM17	100	82.683	Heterocephalus_glaber_male
ENSONIG00000011838	rbm17	100	67.237	ENSHGLG00100010556	-	100	64.548	Heterocephalus_glaber_male
ENSONIG00000011838	rbm17	99	88.249	ENSHCOG00000010865	rbm17	100	88.249	Hippocampus_comes
ENSONIG00000011838	rbm17	100	75.708	ENSIPUG00000007699	Rbm17	100	80.425	Ictalurus_punctatus
ENSONIG00000011838	rbm17	100	82.927	ENSSTOG00000013591	RBM17	100	82.927	Ictidomys_tridecemlineatus
ENSONIG00000011838	rbm17	100	61.916	ENSJJAG00000000993	-	100	60.636	Jaculus_jaculus
ENSONIG00000011838	rbm17	100	82.927	ENSJJAG00000022886	Rbm17	100	82.927	Jaculus_jaculus
ENSONIG00000011838	rbm17	100	89.549	ENSKMAG00000021400	rbm17	100	89.549	Kryptolebias_marmoratus
ENSONIG00000011838	rbm17	100	93.842	ENSLBEG00000000881	rbm17	100	90.974	Labrus_bergylta
ENSONIG00000011838	rbm17	99	66.432	ENSLACG00000017297	RBM17	99	66.667	Latimeria_chalumnae
ENSONIG00000011838	rbm17	100	85.049	ENSLOCG00000015659	rbm17	100	83.942	Lepisosteus_oculatus
ENSONIG00000011838	rbm17	100	82.282	ENSLAFG00000011629	RBM17	100	82.282	Loxodonta_africana
ENSONIG00000011838	rbm17	100	83.292	ENSMFAG00000035521	RBM17	95	90.678	Macaca_fascicularis
ENSONIG00000011838	rbm17	100	83.292	ENSMMUG00000015152	RBM17	95	90.678	Macaca_mulatta
ENSONIG00000011838	rbm17	100	83.292	ENSMNEG00000017264	RBM17	95	90.678	Macaca_nemestrina
ENSONIG00000011838	rbm17	100	83.292	ENSMLEG00000029340	RBM17	95	90.678	Mandrillus_leucophaeus
ENSONIG00000011838	rbm17	100	91.211	ENSMAMG00000000387	rbm17	100	91.211	Mastacembelus_armatus
ENSONIG00000011838	rbm17	100	95.933	ENSMZEG00005015179	rbm17	100	95.933	Maylandia_zebra
ENSONIG00000011838	rbm17	100	83.535	ENSMGAG00000003981	RBM17	100	83.535	Meleagris_gallopavo
ENSONIG00000011838	rbm17	100	82.927	ENSMAUG00000019247	Rbm17	100	82.927	Mesocricetus_auratus
ENSONIG00000011838	rbm17	100	82.683	ENSMICG00000003976	-	100	82.683	Microcebus_murinus
ENSONIG00000011838	rbm17	100	76.812	ENSMICG00000041489	-	100	76.812	Microcebus_murinus
ENSONIG00000011838	rbm17	93	66.579	ENSMOCG00000014517	-	99	66.316	Microtus_ochrogaster
ENSONIG00000011838	rbm17	100	82.927	ENSMOCG00000011847	Rbm17	100	82.927	Microtus_ochrogaster
ENSONIG00000011838	rbm17	100	85.401	ENSMMOG00000010264	rbm17	100	85.401	Mola_mola
ENSONIG00000011838	rbm17	100	83.538	ENSMODG00000016648	RBM17	100	83.538	Monodelphis_domestica
ENSONIG00000011838	rbm17	100	90.047	ENSMALG00000010597	rbm17	100	90.758	Monopterus_albus
ENSONIG00000011838	rbm17	100	82.927	MGP_CAROLIEiJ_G0023173	Rbm17	100	82.927	Mus_caroli
ENSONIG00000011838	rbm17	100	82.927	ENSMUSG00000037197	Rbm17	100	82.927	Mus_musculus
ENSONIG00000011838	rbm17	100	83.171	MGP_PahariEiJ_G0019233	Rbm17	100	83.171	Mus_pahari
ENSONIG00000011838	rbm17	100	82.927	MGP_SPRETEiJ_G0024091	Rbm17	100	82.927	Mus_spretus
ENSONIG00000011838	rbm17	86	81.714	ENSMPUG00000016359	RBM17	96	81.714	Mustela_putorius_furo
ENSONIG00000011838	rbm17	100	78.624	ENSMLUG00000025709	-	100	78.378	Myotis_lucifugus
ENSONIG00000011838	rbm17	100	81.265	ENSMLUG00000002302	-	100	81.265	Myotis_lucifugus
ENSONIG00000011838	rbm17	100	57.248	ENSNGAG00000000663	-	100	57.353	Nannospalax_galili
ENSONIG00000011838	rbm17	100	82.927	ENSNGAG00000000741	Rbm17	100	82.927	Nannospalax_galili
ENSONIG00000011838	rbm17	100	92.118	ENSNBRG00000018148	rbm17	100	92.118	Neolamprologus_brichardi
ENSONIG00000011838	rbm17	100	83.292	ENSNLEG00000033350	RBM17	95	90.678	Nomascus_leucogenys
ENSONIG00000011838	rbm17	100	78.133	ENSMEUG00000011347	RBM17	100	78.133	Notamacropus_eugenii
ENSONIG00000011838	rbm17	100	72.482	ENSOPRG00000002993	RBM17	100	72.482	Ochotona_princeps
ENSONIG00000011838	rbm17	97	64.573	ENSODEG00000007286	-	99	64.070	Octodon_degus
ENSONIG00000011838	rbm17	100	82.725	ENSODEG00000004393	RBM17	100	82.725	Octodon_degus
ENSONIG00000011838	rbm17	100	82.353	ENSOANG00000015455	RBM17	100	82.843	Ornithorhynchus_anatinus
ENSONIG00000011838	rbm17	100	90.499	ENSORLG00000028798	rbm17	100	90.499	Oryzias_latipes
ENSONIG00000011838	rbm17	100	90.499	ENSORLG00020004593	rbm17	100	88.670	Oryzias_latipes_hni
ENSONIG00000011838	rbm17	100	94.089	ENSORLG00015000033	rbm17	100	94.089	Oryzias_latipes_hsok
ENSONIG00000011838	rbm17	100	90.261	ENSOMEG00000012060	rbm17	100	92.500	Oryzias_melastigma
ENSONIG00000011838	rbm17	100	83.171	ENSOGAG00000015687	RBM17	100	83.171	Otolemur_garnettii
ENSONIG00000011838	rbm17	100	83.538	ENSOARG00000012975	RBM17	100	83.538	Ovis_aries
ENSONIG00000011838	rbm17	100	83.292	ENSPPAG00000032347	RBM17	95	90.678	Pan_paniscus
ENSONIG00000011838	rbm17	100	83.538	ENSPPRG00000010706	RBM17	100	83.538	Panthera_pardus
ENSONIG00000011838	rbm17	100	83.538	ENSPTIG00000007596	RBM17	100	83.538	Panthera_tigris_altaica
ENSONIG00000011838	rbm17	100	83.292	ENSPTRG00000002265	RBM17	95	90.678	Pan_troglodytes
ENSONIG00000011838	rbm17	100	83.292	ENSPANG00000023425	RBM17	95	90.678	Papio_anubis
ENSONIG00000011838	rbm17	100	80.986	ENSPKIG00000025526	rbm17	100	80.562	Paramormyrops_kingsleyae
ENSONIG00000011838	rbm17	100	78.788	ENSPKIG00000005048	-	100	80.186	Paramormyrops_kingsleyae
ENSONIG00000011838	rbm17	100	82.683	ENSPSIG00000012332	RBM17	100	82.683	Pelodiscus_sinensis
ENSONIG00000011838	rbm17	100	84.951	ENSPMGG00000007980	rbm17	100	84.709	Periophthalmus_magnuspinnatus
ENSONIG00000011838	rbm17	100	82.927	ENSPEMG00000014320	Rbm17	100	82.927	Peromyscus_maniculatus_bairdii
ENSONIG00000011838	rbm17	100	83.130	ENSPCIG00000019260	-	100	83.130	Phascolarctos_cinereus
ENSONIG00000011838	rbm17	100	89.786	ENSPFOG00000013271	rbm17	100	89.786	Poecilia_formosa
ENSONIG00000011838	rbm17	100	89.311	ENSPLAG00000004455	rbm17	100	89.311	Poecilia_latipinna
ENSONIG00000011838	rbm17	100	92.611	ENSPMEG00000014864	rbm17	100	92.611	Poecilia_mexicana
ENSONIG00000011838	rbm17	100	89.762	ENSPREG00000015589	rbm17	100	89.762	Poecilia_reticulata
ENSONIG00000011838	rbm17	81	59.271	ENSPPYG00000019042	-	100	59.271	Pongo_abelii
ENSONIG00000011838	rbm17	99	62.716	ENSPPYG00000019881	-	100	61.975	Pongo_abelii
ENSONIG00000011838	rbm17	100	83.292	ENSPPYG00000002067	RBM17	100	83.292	Pongo_abelii
ENSONIG00000011838	rbm17	100	75.921	ENSPCAG00000016879	RBM17	100	75.921	Procavia_capensis
ENSONIG00000011838	rbm17	100	83.292	ENSPCOG00000027881	RBM17	100	83.292	Propithecus_coquereli
ENSONIG00000011838	rbm17	100	74.693	ENSPVAG00000015499	RBM17	100	73.710	Pteropus_vampyrus
ENSONIG00000011838	rbm17	100	86.207	ENSPNYG00000015274	rbm17	100	86.207	Pundamilia_nyererei
ENSONIG00000011838	rbm17	100	84.360	ENSPNAG00000030046	rbm17	100	85.782	Pygocentrus_nattereri
ENSONIG00000011838	rbm17	100	82.927	ENSRNOG00000018767	Rbm17	100	82.927	Rattus_norvegicus
ENSONIG00000011838	rbm17	100	83.292	ENSRBIG00000043727	RBM17	95	90.678	Rhinopithecus_bieti
ENSONIG00000011838	rbm17	100	83.292	ENSRROG00000044142	RBM17	95	90.678	Rhinopithecus_roxellana
ENSONIG00000011838	rbm17	100	83.538	ENSSBOG00000031661	-	100	83.538	Saimiri_boliviensis_boliviensis
ENSONIG00000011838	rbm17	100	74.447	ENSSBOG00000023653	-	100	74.447	Saimiri_boliviensis_boliviensis
ENSONIG00000011838	rbm17	100	83.538	ENSSHAG00000012480	-	100	83.538	Sarcophilus_harrisii
ENSONIG00000011838	rbm17	100	82.885	ENSSFOG00015009892	rbm17	100	84.352	Scleropages_formosus
ENSONIG00000011838	rbm17	100	87.269	ENSSMAG00000012368	rbm17	100	87.269	Scophthalmus_maximus
ENSONIG00000011838	rbm17	100	92.961	ENSSDUG00000015015	rbm17	100	93.932	Seriola_dumerili
ENSONIG00000011838	rbm17	100	92.961	ENSSLDG00000014486	rbm17	100	93.932	Seriola_lalandi_dorsalis
ENSONIG00000011838	rbm17	50	80.909	ENSSARG00000001792	-	79	90.244	Sorex_araneus
ENSONIG00000011838	rbm17	99	83.744	ENSSPUG00000001036	RBM17	99	83.744	Sphenodon_punctatus
ENSONIG00000011838	rbm17	100	96.552	ENSSPAG00000002338	rbm17	100	96.552	Stegastes_partitus
ENSONIG00000011838	rbm17	100	83.292	ENSSSCG00000011134	RBM17	100	83.292	Sus_scrofa
ENSONIG00000011838	rbm17	100	83.171	ENSTGUG00000002013	RBM17	100	83.171	Taeniopygia_guttata
ENSONIG00000011838	rbm17	100	91.872	ENSTRUG00000010698	rbm17	100	91.872	Takifugu_rubripes
ENSONIG00000011838	rbm17	100	90.686	ENSTNIG00000006892	rbm17	100	90.686	Tetraodon_nigroviridis
ENSONIG00000011838	rbm17	100	65.602	ENSTBEG00000014686	RBM17	100	64.286	Tupaia_belangeri
ENSONIG00000011838	rbm17	90	82.787	ENSTTRG00000001344	RBM17	100	82.787	Tursiops_truncatus
ENSONIG00000011838	rbm17	100	79.607	ENSUAMG00000009499	RBM17	100	79.115	Ursus_americanus
ENSONIG00000011838	rbm17	100	83.784	ENSUMAG00000012237	RBM17	100	83.784	Ursus_maritimus
ENSONIG00000011838	rbm17	100	71.990	ENSVPAG00000005497	RBM17	100	71.990	Vicugna_pacos
ENSONIG00000011838	rbm17	100	79.115	ENSVVUG00000006780	RBM17	100	79.115	Vulpes_vulpes
ENSONIG00000011838	rbm17	99	80.000	ENSXETG00000018123	rbm17	100	79.753	Xenopus_tropicalis
ENSONIG00000011838	rbm17	100	92.611	ENSXMAG00000008674	rbm17	100	92.365	Xiphophorus_maculatus