EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000011895 (Gene tree)
Gene ID: 100701649
Gene Symbol: larp4aa
Alias: -
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 10430 bases
Position: chrGL831196.1:336006-346435
Accession: 100701649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000014973	La	PF05383.17	1.1e-17	1	1
ENSONIP00000014972	La	PF05383.17	1.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000014984	-	3007	-	ENSONIP00000014972	792 (aa)	XP_003448273	I3K1H7
ENSONIT00000014985	-	2268	-	ENSONIP00000014973	755 (aa)	-	I3K1H8

Gene Model

Click here to download ENSONIG00000011895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000011895's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000011895	larp4aa	99	47.468	ENSONIG00000019124	larp4ab	100	46.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000011895	larp4aa	94	57.823	ENSG00000161813	LARP4	95	67.416	Homo_sapiens
ENSONIG00000011895	larp4aa	100	87.563	ENSAPOG00000007142	larp4aa	100	87.814	Acanthochromis_polyacanthus
ENSONIG00000011895	larp4aa	99	49.748	ENSAPOG00000021331	larp4ab	100	50.000	Acanthochromis_polyacanthus
ENSONIG00000011895	larp4aa	99	48.638	ENSAMEG00000001275	LARP4	100	48.705	Ailuropoda_melanoleuca
ENSONIG00000011895	larp4aa	100	88.903	ENSACIG00000001198	larp4aa	100	88.651	Amphilophus_citrinellus
ENSONIG00000011895	larp4aa	99	49.174	ENSAOCG00000006387	larp4ab	100	48.489	Amphiprion_ocellaris
ENSONIG00000011895	larp4aa	100	87.829	ENSAOCG00000002408	larp4aa	100	87.829	Amphiprion_ocellaris
ENSONIG00000011895	larp4aa	100	87.704	ENSAPEG00000019058	larp4aa	100	87.704	Amphiprion_percula
ENSONIG00000011895	larp4aa	100	86.809	ENSATEG00000020715	larp4aa	100	86.432	Anabas_testudineus
ENSONIG00000011895	larp4aa	99	46.910	ENSATEG00000001018	larp4ab	100	47.698	Anabas_testudineus
ENSONIG00000011895	larp4aa	99	48.852	ENSAPLG00000013661	LARP4	99	49.487	Anas_platyrhynchos
ENSONIG00000011895	larp4aa	99	48.961	ENSACAG00000017133	LARP4	97	48.831	Anolis_carolinensis
ENSONIG00000011895	larp4aa	94	58.844	ENSANAG00000029342	LARP4	99	62.963	Aotus_nancymaae
ENSONIG00000011895	larp4aa	100	97.358	ENSACLG00000002575	larp4aa	100	97.358	Astatotilapia_calliptera
ENSONIG00000011895	larp4aa	100	64.792	ENSAMXG00000036493	larp4aa	100	66.422	Astyanax_mexicanus
ENSONIG00000011895	larp4aa	100	50.856	ENSAMXG00000001515	larp4ab	100	52.625	Astyanax_mexicanus
ENSONIG00000011895	larp4aa	99	49.233	ENSBTAG00000017164	LARP4	99	48.849	Bos_taurus
ENSONIG00000011895	larp4aa	93	59.170	ENSCJAG00000021131	LARP4	99	62.222	Callithrix_jacchus
ENSONIG00000011895	larp4aa	99	49.221	ENSCAFG00000008174	LARP4	100	48.765	Canis_familiaris
ENSONIG00000011895	larp4aa	93	60.351	ENSCAFG00020014554	LARP4	100	60.351	Canis_lupus_dingo
ENSONIG00000011895	larp4aa	99	48.974	ENSCHIG00000025965	LARP4	99	48.652	Capra_hircus
ENSONIG00000011895	larp4aa	87	63.271	ENSTSYG00000004342	LARP4	96	63.369	Carlito_syrichta
ENSONIG00000011895	larp4aa	98	36.689	ENSCAPG00000012942	LARP4	91	47.139	Cavia_aperea
ENSONIG00000011895	larp4aa	99	45.195	ENSCPOG00000020519	LARP4	100	44.993	Cavia_porcellus
ENSONIG00000011895	larp4aa	89	63.369	ENSCCAG00000024439	LARP4	99	61.852	Cebus_capucinus
ENSONIG00000011895	larp4aa	99	47.526	ENSCATG00000044528	LARP4	100	47.135	Cercocebus_atys
ENSONIG00000011895	larp4aa	99	48.429	ENSCLAG00000001829	LARP4	100	48.168	Chinchilla_lanigera
ENSONIG00000011895	larp4aa	52	60.967	ENSCHOG00000010490	-	55	60.967	Choloepus_hoffmanni
ENSONIG00000011895	larp4aa	99	50.064	ENSCPBG00000019407	LARP4	90	49.550	Chrysemys_picta_bellii
ENSONIG00000011895	larp4aa	94	58.503	ENSCANG00000029159	-	99	62.593	Colobus_angolensis_palliatus
ENSONIG00000011895	larp4aa	89	54.717	ENSCANG00000033097	-	77	75.862	Colobus_angolensis_palliatus
ENSONIG00000011895	larp4aa	99	49.287	ENSCGRG00001010818	Larp4	100	48.900	Cricetulus_griseus_chok1gshd
ENSONIG00000011895	larp4aa	99	49.347	ENSCGRG00000009382	Larp4	100	48.958	Cricetulus_griseus_crigri
ENSONIG00000011895	larp4aa	100	81.343	ENSCSEG00000001963	larp4aa	100	81.468	Cynoglossus_semilaevis
ENSONIG00000011895	larp4aa	64	54.247	ENSCSEG00000003240	larp4ab	98	47.145	Cynoglossus_semilaevis
ENSONIG00000011895	larp4aa	100	83.459	ENSCVAG00000005488	larp4aa	100	82.581	Cyprinodon_variegatus
ENSONIG00000011895	larp4aa	100	63.035	ENSDARG00000078401	larp4aa	100	63.415	Danio_rerio
ENSONIG00000011895	larp4aa	99	50.385	ENSDARG00000074979	larp4ab	85	82.000	Danio_rerio
ENSONIG00000011895	larp4aa	99	48.768	ENSDNOG00000038525	LARP4	99	48.379	Dasypus_novemcinctus
ENSONIG00000011895	larp4aa	99	46.401	ENSDORG00000004013	Larp4	100	46.144	Dipodomys_ordii
ENSONIG00000011895	larp4aa	73	54.104	ENSETEG00000011683	LARP4	72	54.104	Echinops_telfairi
ENSONIG00000011895	larp4aa	70	38.687	ENSEBUG00000004426	LARP4	66	45.692	Eptatretus_burgeri
ENSONIG00000011895	larp4aa	69	38.556	ENSEBUG00000010394	LARP4	65	53.962	Eptatretus_burgeri
ENSONIG00000011895	larp4aa	86	59.914	ENSEASG00005004356	LARP4	100	59.914	Equus_asinus_asinus
ENSONIG00000011895	larp4aa	99	48.834	ENSECAG00000012479	LARP4	100	48.508	Equus_caballus
ENSONIG00000011895	larp4aa	71	85.470	ENSEEUG00000000316	LARP4	69	85.470	Erinaceus_europaeus
ENSONIG00000011895	larp4aa	100	62.882	ENSELUG00000000395	larp4aa	100	62.393	Esox_lucius
ENSONIG00000011895	larp4aa	99	52.157	ENSELUG00000018650	larp4ab	73	78.947	Esox_lucius
ENSONIG00000011895	larp4aa	93	60.279	ENSFCAG00000031897	LARP4	96	63.807	Felis_catus
ENSONIG00000011895	larp4aa	84	51.070	ENSFALG00000002114	LARP4	96	52.121	Ficedula_albicollis
ENSONIG00000011895	larp4aa	99	48.182	ENSFDAG00000006406	-	100	48.512	Fukomys_damarensis
ENSONIG00000011895	larp4aa	100	81.165	ENSFHEG00000004338	larp4aa	100	80.793	Fundulus_heteroclitus
ENSONIG00000011895	larp4aa	99	45.908	ENSFHEG00000013854	larp4ab	99	46.105	Fundulus_heteroclitus
ENSONIG00000011895	larp4aa	100	72.956	ENSGMOG00000008246	larp4aa	100	71.411	Gadus_morhua
ENSONIG00000011895	larp4aa	95	48.656	ENSGALG00000042122	LARP4	93	49.059	Gallus_gallus
ENSONIG00000011895	larp4aa	99	45.295	ENSGAFG00000021777	larp4ab	99	47.436	Gambusia_affinis
ENSONIG00000011895	larp4aa	100	81.227	ENSGACG00000008381	larp4aa	98	89.227	Gasterosteus_aculeatus
ENSONIG00000011895	larp4aa	99	49.488	ENSGACG00000000680	larp4ab	99	51.456	Gasterosteus_aculeatus
ENSONIG00000011895	larp4aa	99	49.161	ENSGAGG00000006969	LARP4	99	49.032	Gopherus_agassizii
ENSONIG00000011895	larp4aa	87	55.577	ENSGGOG00000015230	LARP4	91	60.967	Gorilla_gorilla
ENSONIG00000011895	larp4aa	100	97.484	ENSHBUG00000023074	larp4aa	100	97.484	Haplochromis_burtoni
ENSONIG00000011895	larp4aa	88	49.558	ENSHGLG00000005513	-	97	49.263	Heterocephalus_glaber_female
ENSONIG00000011895	larp4aa	86	48.160	ENSHGLG00000013875	-	99	46.933	Heterocephalus_glaber_female
ENSONIG00000011895	larp4aa	99	47.871	ENSHGLG00100016984	-	100	47.613	Heterocephalus_glaber_male
ENSONIG00000011895	larp4aa	99	45.278	ENSHGLG00100011678	-	100	44.358	Heterocephalus_glaber_male
ENSONIG00000011895	larp4aa	100	75.472	ENSHCOG00000015951	larp4aa	100	74.874	Hippocampus_comes
ENSONIG00000011895	larp4aa	99	44.727	ENSHCOG00000020857	larp4ab	100	46.461	Hippocampus_comes
ENSONIG00000011895	larp4aa	99	48.564	ENSIPUG00000021659	larp4ab	100	47.650	Ictalurus_punctatus
ENSONIG00000011895	larp4aa	100	61.715	ENSIPUG00000007514	larp4aa	100	62.410	Ictalurus_punctatus
ENSONIG00000011895	larp4aa	99	49.935	ENSSTOG00000003553	LARP4	100	49.673	Ictidomys_tridecemlineatus
ENSONIG00000011895	larp4aa	99	47.073	ENSKMAG00000018556	larp4ab	100	48.608	Kryptolebias_marmoratus
ENSONIG00000011895	larp4aa	100	81.955	ENSKMAG00000006800	larp4aa	100	81.579	Kryptolebias_marmoratus
ENSONIG00000011895	larp4aa	95	49.872	ENSLBEG00000019306	larp4ab	100	50.193	Labrus_bergylta
ENSONIG00000011895	larp4aa	97	83.733	ENSLBEG00000014537	larp4aa	100	82.225	Labrus_bergylta
ENSONIG00000011895	larp4aa	99	51.080	ENSLACG00000019090	LARP4	99	51.030	Latimeria_chalumnae
ENSONIG00000011895	larp4aa	100	60.806	ENSLOCG00000007113	larp4ab	100	61.172	Lepisosteus_oculatus
ENSONIG00000011895	larp4aa	99	48.708	ENSLAFG00000005160	LARP4	85	73.359	Loxodonta_africana
ENSONIG00000011895	larp4aa	87	63.904	ENSMFAG00000043681	LARP4	99	62.593	Macaca_fascicularis
ENSONIG00000011895	larp4aa	87	63.904	ENSMMUG00000008172	LARP4	99	62.593	Macaca_mulatta
ENSONIG00000011895	larp4aa	79	54.658	ENSMNEG00000037799	-	78	75.862	Macaca_nemestrina
ENSONIG00000011895	larp4aa	94	48.493	ENSMNEG00000034602	LARP4	99	48.271	Macaca_nemestrina
ENSONIG00000011895	larp4aa	94	58.503	ENSMLEG00000039661	LARP4	99	62.593	Mandrillus_leucophaeus
ENSONIG00000011895	larp4aa	100	87.594	ENSMAMG00000011206	larp4aa	100	86.717	Mastacembelus_armatus
ENSONIG00000011895	larp4aa	99	49.936	ENSMAMG00000002616	larp4ab	100	51.421	Mastacembelus_armatus
ENSONIG00000011895	larp4aa	100	97.358	ENSMZEG00005001813	larp4aa	100	97.358	Maylandia_zebra
ENSONIG00000011895	larp4aa	95	47.861	ENSMGAG00000010598	LARP4	93	48.396	Meleagris_gallopavo
ENSONIG00000011895	larp4aa	73	83.571	ENSMICG00000030156	-	96	60.680	Microcebus_murinus
ENSONIG00000011895	larp4aa	76	84.615	ENSMICG00000012388	-	97	84.615	Microcebus_murinus
ENSONIG00000011895	larp4aa	99	50.453	ENSMOCG00000020635	Larp4	100	49.741	Microtus_ochrogaster
ENSONIG00000011895	larp4aa	99	46.907	ENSMMOG00000021861	larp4ab	92	57.865	Mola_mola
ENSONIG00000011895	larp4aa	100	79.219	ENSMMOG00000004785	larp4aa	100	79.219	Mola_mola
ENSONIG00000011895	larp4aa	86	56.633	MGP_CAROLIEiJ_G0020281	Larp4	83	64.396	Mus_caroli
ENSONIG00000011895	larp4aa	99	49.611	ENSMUSG00000023025	Larp4	61	64.533	Mus_musculus
ENSONIG00000011895	larp4aa	99	49.288	MGP_PahariEiJ_G0020284	Larp4	51	64.000	Mus_pahari
ENSONIG00000011895	larp4aa	99	49.804	ENSMPUG00000008706	LARP4	97	49.283	Mustela_putorius_furo
ENSONIG00000011895	larp4aa	99	48.031	ENSMLUG00000012513	-	99	47.706	Myotis_lucifugus
ENSONIG00000011895	larp4aa	99	48.638	ENSNGAG00000001577	-	99	49.647	Nannospalax_galili
ENSONIG00000011895	larp4aa	100	97.358	ENSNBRG00000011292	larp4aa	100	97.358	Neolamprologus_brichardi
ENSONIG00000011895	larp4aa	94	57.912	ENSNLEG00000017798	LARP4	99	61.905	Nomascus_leucogenys
ENSONIG00000011895	larp4aa	99	48.037	ENSODEG00000009770	LARP4	100	47.775	Octodon_degus
ENSONIG00000011895	larp4aa	68	55.854	ENSOANG00000004373	LARP4	93	55.662	Ornithorhynchus_anatinus
ENSONIG00000011895	larp4aa	99	47.036	ENSOCUG00000026872	-	99	47.545	Oryctolagus_cuniculus
ENSONIG00000011895	larp4aa	99	47.226	ENSOCUG00000021417	-	99	47.165	Oryctolagus_cuniculus
ENSONIG00000011895	larp4aa	100	78.518	ENSORLG00000006758	larp4aa	100	77.358	Oryzias_latipes
ENSONIG00000011895	larp4aa	100	78.518	ENSORLG00020010258	larp4aa	100	77.484	Oryzias_latipes_hni
ENSONIG00000011895	larp4aa	100	77.889	ENSORLG00015002292	larp4aa	100	76.855	Oryzias_latipes_hsok
ENSONIG00000011895	larp4aa	100	74.937	ENSOMEG00000019749	larp4aa	96	85.028	Oryzias_melastigma
ENSONIG00000011895	larp4aa	67	54.913	ENSOGAG00000001415	LARP4	99	53.757	Otolemur_garnettii
ENSONIG00000011895	larp4aa	99	48.590	ENSOARG00000017702	LARP4	99	48.267	Ovis_aries
ENSONIG00000011895	larp4aa	70	63.369	ENSPPAG00000035100	LARP4	99	63.200	Pan_paniscus
ENSONIG00000011895	larp4aa	93	60.279	ENSPPRG00000004522	LARP4	96	63.807	Panthera_pardus
ENSONIG00000011895	larp4aa	93	60.279	ENSPTIG00000015617	LARP4	96	63.807	Panthera_tigris_altaica
ENSONIG00000011895	larp4aa	94	57.823	ENSPTRG00000004935	LARP4	99	61.852	Pan_troglodytes
ENSONIG00000011895	larp4aa	94	58.163	ENSPANG00000022964	LARP4	99	62.222	Papio_anubis
ENSONIG00000011895	larp4aa	100	59.174	ENSPKIG00000005950	larp4ab	100	58.080	Paramormyrops_kingsleyae
ENSONIG00000011895	larp4aa	99	49.544	ENSPSIG00000015867	LARP4	99	49.022	Pelodiscus_sinensis
ENSONIG00000011895	larp4aa	99	48.312	ENSPEMG00000018433	Larp4	99	47.792	Peromyscus_maniculatus_bairdii
ENSONIG00000011895	larp4aa	56	57.708	ENSPMAG00000002788	LARP4	78	57.752	Petromyzon_marinus
ENSONIG00000011895	larp4aa	99	50.390	ENSPCIG00000000384	LARP4	99	50.000	Phascolarctos_cinereus
ENSONIG00000011895	larp4aa	100	82.668	ENSPFOG00000013148	larp4aa	100	82.170	Poecilia_formosa
ENSONIG00000011895	larp4aa	99	46.760	ENSPFOG00000009764	larp4ab	99	47.301	Poecilia_formosa
ENSONIG00000011895	larp4aa	99	46.310	ENSPLAG00000008502	larp4ab	99	47.429	Poecilia_latipinna
ENSONIG00000011895	larp4aa	100	82.668	ENSPLAG00000013626	larp4aa	100	82.170	Poecilia_latipinna
ENSONIG00000011895	larp4aa	100	82.918	ENSPMEG00000014271	larp4aa	100	82.170	Poecilia_mexicana
ENSONIG00000011895	larp4aa	99	46.709	ENSPMEG00000002720	larp4ab	99	47.148	Poecilia_mexicana
ENSONIG00000011895	larp4aa	100	82.772	ENSPREG00000022597	larp4aa	100	82.272	Poecilia_reticulata
ENSONIG00000011895	larp4aa	68	55.985	ENSPPYG00000004512	-	99	55.212	Pongo_abelii
ENSONIG00000011895	larp4aa	93	45.682	ENSPCAG00000003671	LARP4	80	67.361	Procavia_capensis
ENSONIG00000011895	larp4aa	87	63.807	ENSPCOG00000026291	LARP4	96	63.941	Propithecus_coquereli
ENSONIG00000011895	larp4aa	93	42.797	ENSPVAG00000016840	LARP4	92	42.757	Pteropus_vampyrus
ENSONIG00000011895	larp4aa	100	97.358	ENSPNYG00000022265	larp4aa	100	97.358	Pundamilia_nyererei
ENSONIG00000011895	larp4aa	99	53.282	ENSPNAG00000014478	larp4ab	99	53.788	Pygocentrus_nattereri
ENSONIG00000011895	larp4aa	96	64.968	ENSPNAG00000024770	larp4aa	99	64.459	Pygocentrus_nattereri
ENSONIG00000011895	larp4aa	85	56.952	ENSRBIG00000038857	-	93	62.454	Rhinopithecus_bieti
ENSONIG00000011895	larp4aa	94	50.871	ENSRBIG00000036890	-	100	54.789	Rhinopithecus_bieti
ENSONIG00000011895	larp4aa	94	50.871	ENSRROG00000025487	-	100	54.789	Rhinopithecus_roxellana
ENSONIG00000011895	larp4aa	94	58.362	ENSRROG00000042764	-	100	62.454	Rhinopithecus_roxellana
ENSONIG00000011895	larp4aa	94	57.143	ENSSBOG00000026650	LARP4	99	61.111	Saimiri_boliviensis_boliviensis
ENSONIG00000011895	larp4aa	100	60.050	ENSSFOG00015014096	larp4ab	99	61.408	Scleropages_formosus
ENSONIG00000011895	larp4aa	99	61.320	ENSSFOG00015003868	larp4aa	100	61.419	Scleropages_formosus
ENSONIG00000011895	larp4aa	100	86.466	ENSSMAG00000019473	larp4aa	100	85.069	Scophthalmus_maximus
ENSONIG00000011895	larp4aa	99	48.858	ENSSMAG00000002838	larp4ab	100	50.513	Scophthalmus_maximus
ENSONIG00000011895	larp4aa	100	88.331	ENSSDUG00000010621	larp4aa	100	88.959	Seriola_dumerili
ENSONIG00000011895	larp4aa	99	49.814	ENSSDUG00000006655	larp4ab	100	51.650	Seriola_dumerili
ENSONIG00000011895	larp4aa	99	50.127	ENSSLDG00000001791	larp4ab	100	51.790	Seriola_lalandi_dorsalis
ENSONIG00000011895	larp4aa	100	87.578	ENSSLDG00000004942	larp4aa	100	88.206	Seriola_lalandi_dorsalis
ENSONIG00000011895	larp4aa	86	55.492	ENSSARG00000012469	LARP4	88	55.492	Sorex_araneus
ENSONIG00000011895	larp4aa	95	48.347	ENSSPUG00000016552	LARP4	93	48.219	Sphenodon_punctatus
ENSONIG00000011895	larp4aa	99	49.430	ENSSPAG00000002172	larp4ab	100	50.000	Stegastes_partitus
ENSONIG00000011895	larp4aa	87	91.176	ENSSPAG00000007222	larp4aa	94	91.176	Stegastes_partitus
ENSONIG00000011895	larp4aa	99	49.545	ENSSSCG00000028516	LARP4	85	68.167	Sus_scrofa
ENSONIG00000011895	larp4aa	99	49.157	ENSTGUG00000003479	LARP4	100	49.805	Taeniopygia_guttata
ENSONIG00000011895	larp4aa	99	45.165	ENSTRUG00000007206	larp4ab	100	46.154	Takifugu_rubripes
ENSONIG00000011895	larp4aa	99	45.235	ENSTNIG00000014571	larp4ab	100	44.388	Tetraodon_nigroviridis
ENSONIG00000011895	larp4aa	95	76.556	ENSTNIG00000015109	larp4aa	99	75.597	Tetraodon_nigroviridis
ENSONIG00000011895	larp4aa	99	41.818	ENSTBEG00000005167	LARP4	83	52.353	Tupaia_belangeri
ENSONIG00000011895	larp4aa	99	48.196	ENSTTRG00000003764	LARP4	99	47.748	Tursiops_truncatus
ENSONIG00000011895	larp4aa	69	56.298	ENSUAMG00000013764	LARP4	99	55.619	Ursus_americanus
ENSONIG00000011895	larp4aa	99	48.834	ENSUMAG00000008473	LARP4	99	48.900	Ursus_maritimus
ENSONIG00000011895	larp4aa	99	47.954	ENSVPAG00000010136	LARP4	100	47.698	Vicugna_pacos
ENSONIG00000011895	larp4aa	93	60.351	ENSVVUG00000024717	LARP4	100	60.351	Vulpes_vulpes
ENSONIG00000011895	larp4aa	93	49.041	ENSXETG00000007283	larp4	100	49.524	Xenopus_tropicalis
ENSONIG00000011895	larp4aa	100	77.556	ENSXCOG00000006387	larp4aa	100	77.307	Xiphophorus_couchianus
ENSONIG00000011895	larp4aa	50	57.653	ENSXCOG00000019635	larp4ab	95	60.811	Xiphophorus_couchianus
ENSONIG00000011895	larp4aa	100	82.668	ENSXMAG00000010519	larp4aa	100	82.045	Xiphophorus_maculatus
ENSONIG00000011895	larp4aa	99	46.456	ENSXMAG00000002156	larp4ab	99	48.000	Xiphophorus_maculatus