EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000011969 (Gene tree)
Gene ID: 100704592
Gene Symbol: lig4
Alias: -
Full Name: ligase IV%2C DNA%2C ATP-dependent
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 9251 bases
Position: chrGL831144.1:1436019-1445269
Accession: ZDB-GENE-070820-10
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000015069	RNA_ligase	PF09414.10	5.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000015082	-	6914	-	ENSONIP00000015069	922 (aa)	-	I3K1S4

Gene Model

Click here to download ENSONIG00000011969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000011969's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000011969	lig4	98	66.117	ENSG00000174405	LIG4	99	66.429	Homo_sapiens
ENSONIG00000011969	lig4	99	90.869	ENSAPOG00000000866	lig4	99	90.869	Acanthochromis_polyacanthus
ENSONIG00000011969	lig4	99	64.270	ENSAMEG00000019685	LIG4	100	63.943	Ailuropoda_melanoleuca
ENSONIG00000011969	lig4	99	93.626	ENSACIG00000018309	lig4	100	93.626	Amphilophus_citrinellus
ENSONIG00000011969	lig4	99	90.979	ENSAOCG00000011768	lig4	99	90.979	Amphiprion_ocellaris
ENSONIG00000011969	lig4	99	90.979	ENSAPEG00000017815	lig4	99	90.979	Amphiprion_percula
ENSONIG00000011969	lig4	98	88.656	ENSATEG00000005583	lig4	99	88.656	Anabas_testudineus
ENSONIG00000011969	lig4	95	67.086	ENSAPLG00000001673	LIG4	99	67.086	Anas_platyrhynchos
ENSONIG00000011969	lig4	98	67.845	ENSACAG00000014566	LIG4	99	67.996	Anolis_carolinensis
ENSONIG00000011969	lig4	98	65.714	ENSANAG00000012446	LIG4	99	65.495	Aotus_nancymaae
ENSONIG00000011969	lig4	99	97.582	ENSACLG00000027051	lig4	100	97.582	Astatotilapia_calliptera
ENSONIG00000011969	lig4	98	80.659	ENSAMXG00000008192	lig4	94	80.659	Astyanax_mexicanus
ENSONIG00000011969	lig4	98	65.165	ENSBTAG00000015868	LIG4	99	64.945	Bos_taurus
ENSONIG00000011969	lig4	98	65.165	ENSCJAG00000014689	LIG4	99	64.945	Callithrix_jacchus
ENSONIG00000011969	lig4	98	65.055	ENSCAFG00000006031	LIG4	99	64.835	Canis_familiaris
ENSONIG00000011969	lig4	98	65.055	ENSCAFG00020021230	LIG4	99	64.835	Canis_lupus_dingo
ENSONIG00000011969	lig4	98	65.055	ENSCHIG00000001019	LIG4	99	64.835	Capra_hircus
ENSONIG00000011969	lig4	97	65.521	ENSCAPG00000006284	LIG4	99	65.299	Cavia_aperea
ENSONIG00000011969	lig4	98	65.347	ENSCPOG00000014266	LIG4	99	65.127	Cavia_porcellus
ENSONIG00000011969	lig4	98	65.677	ENSCCAG00000019971	LIG4	99	65.457	Cebus_capucinus
ENSONIG00000011969	lig4	97	65.781	ENSCATG00000021075	LIG4	99	65.559	Cercocebus_atys
ENSONIG00000011969	lig4	97	65.743	ENSCLAG00000003376	LIG4	99	65.410	Chinchilla_lanigera
ENSONIG00000011969	lig4	97	65.781	ENSCSAG00000000211	LIG4	99	65.559	Chlorocebus_sabaeus
ENSONIG00000011969	lig4	97	68.444	ENSCPBG00000023291	LIG4	99	67.908	Chrysemys_picta_bellii
ENSONIG00000011969	lig4	68	47.799	ENSCING00000009536	-	97	47.799	Ciona_intestinalis
ENSONIG00000011969	lig4	82	45.000	ENSCSAVG00000010336	-	98	45.000	Ciona_savignyi
ENSONIG00000011969	lig4	97	65.781	ENSCANG00000005805	LIG4	99	65.559	Colobus_angolensis_palliatus
ENSONIG00000011969	lig4	98	65.165	ENSCGRG00001012072	Lig4	99	65.165	Cricetulus_griseus_chok1gshd
ENSONIG00000011969	lig4	98	65.165	ENSCGRG00000013417	Lig4	99	65.165	Cricetulus_griseus_crigri
ENSONIG00000011969	lig4	97	84.607	ENSCSEG00000013905	lig4	97	84.607	Cynoglossus_semilaevis
ENSONIG00000011969	lig4	99	87.377	ENSCVAG00000007896	lig4	100	87.377	Cyprinodon_variegatus
ENSONIG00000011969	lig4	99	80.528	ENSDARG00000060620	lig4	99	80.528	Danio_rerio
ENSONIG00000011969	lig4	98	65.284	ENSDNOG00000000513	LIG4	99	64.956	Dasypus_novemcinctus
ENSONIG00000011969	lig4	97	65.965	ENSDORG00000027303	Lig4	99	65.854	Dipodomys_ordii
ENSONIG00000011969	lig4	91	31.038	FBgn0030506	Lig4	93	30.926	Drosophila_melanogaster
ENSONIG00000011969	lig4	97	63.596	ENSETEG00000015563	LIG4	99	63.707	Echinops_telfairi
ENSONIG00000011969	lig4	99	44.387	ENSEBUG00000014243	lig4	99	44.179	Eptatretus_burgeri
ENSONIG00000011969	lig4	98	65.385	ENSEASG00005022073	LIG4	99	65.275	Equus_asinus_asinus
ENSONIG00000011969	lig4	98	65.055	ENSECAG00000003257	LIG4	99	64.945	Equus_caballus
ENSONIG00000011969	lig4	97	83.871	ENSELUG00000006787	lig4	99	83.982	Esox_lucius
ENSONIG00000011969	lig4	98	64.066	ENSFCAG00000031985	LIG4	99	63.736	Felis_catus
ENSONIG00000011969	lig4	88	68.564	ENSFALG00000004214	LIG4	98	68.564	Ficedula_albicollis
ENSONIG00000011969	lig4	98	64.576	ENSFDAG00000008973	LIG4	99	64.356	Fukomys_damarensis
ENSONIG00000011969	lig4	99	87.717	ENSFHEG00000007398	lig4	91	87.717	Fundulus_heteroclitus
ENSONIG00000011969	lig4	84	77.635	ENSGMOG00000012843	lig4	99	77.635	Gadus_morhua
ENSONIG00000011969	lig4	99	65.642	ENSGALG00000016854	LIG4	99	65.642	Gallus_gallus
ENSONIG00000011969	lig4	99	86.637	ENSGAFG00000019779	lig4	96	86.966	Gambusia_affinis
ENSONIG00000011969	lig4	99	84.396	ENSGACG00000014135	lig4	99	84.396	Gasterosteus_aculeatus
ENSONIG00000011969	lig4	98	65.897	ENSGGOG00000027771	LIG4	99	65.677	Gorilla_gorilla
ENSONIG00000011969	lig4	99	97.363	ENSHBUG00000006245	lig4	100	97.363	Haplochromis_burtoni
ENSONIG00000011969	lig4	98	65.088	ENSHGLG00000000718	LIG4	99	64.868	Heterocephalus_glaber_female
ENSONIG00000011969	lig4	98	65.088	ENSHGLG00100003265	LIG4	99	64.868	Heterocephalus_glaber_male
ENSONIG00000011969	lig4	99	81.339	ENSHCOG00000012010	lig4	99	81.339	Hippocampus_comes
ENSONIG00000011969	lig4	99	78.791	ENSIPUG00000013748	lig4	100	78.791	Ictalurus_punctatus
ENSONIG00000011969	lig4	98	65.237	ENSSTOG00000024303	LIG4	99	65.017	Ictidomys_tridecemlineatus
ENSONIG00000011969	lig4	98	65.093	ENSJJAG00000006750	Lig4	99	64.764	Jaculus_jaculus
ENSONIG00000011969	lig4	99	84.928	ENSKMAG00000001149	lig4	99	84.928	Kryptolebias_marmoratus
ENSONIG00000011969	lig4	89	88.606	ENSLBEG00000014578	lig4	99	88.606	Labrus_bergylta
ENSONIG00000011969	lig4	99	68.167	ENSLACG00000003282	LIG4	99	68.167	Latimeria_chalumnae
ENSONIG00000011969	lig4	99	72.186	ENSLOCG00000008901	lig4	99	72.186	Lepisosteus_oculatus
ENSONIG00000011969	lig4	98	64.544	ENSLAFG00000031152	LIG4	99	64.435	Loxodonta_africana
ENSONIG00000011969	lig4	97	65.891	ENSMFAG00000037235	LIG4	99	65.670	Macaca_fascicularis
ENSONIG00000011969	lig4	97	65.781	ENSMMUG00000008874	LIG4	99	65.559	Macaca_mulatta
ENSONIG00000011969	lig4	97	65.891	ENSMNEG00000023575	LIG4	99	65.670	Macaca_nemestrina
ENSONIG00000011969	lig4	97	65.670	ENSMLEG00000026720	LIG4	99	65.449	Mandrillus_leucophaeus
ENSONIG00000011969	lig4	99	88.415	ENSMAMG00000008472	lig4	100	88.415	Mastacembelus_armatus
ENSONIG00000011969	lig4	99	97.363	ENSMZEG00005001855	lig4	100	97.363	Maylandia_zebra
ENSONIG00000011969	lig4	99	65.752	ENSMGAG00000015532	LIG4	99	65.752	Meleagris_gallopavo
ENSONIG00000011969	lig4	98	63.916	ENSMOCG00000019000	Lig4	99	63.916	Microtus_ochrogaster
ENSONIG00000011969	lig4	99	86.923	ENSMMOG00000004390	lig4	100	86.923	Mola_mola
ENSONIG00000011969	lig4	98	66.703	ENSMODG00000025064	LIG4	99	66.593	Monodelphis_domestica
ENSONIG00000011969	lig4	99	88.022	ENSMALG00000008555	lig4	100	88.022	Monopterus_albus
ENSONIG00000011969	lig4	98	65.237	MGP_CAROLIEiJ_G0030809	Lig4	99	65.022	Mus_caroli
ENSONIG00000011969	lig4	98	64.796	ENSMUSG00000049717	Lig4	99	64.583	Mus_musculus
ENSONIG00000011969	lig4	98	64.796	MGP_PahariEiJ_G0021270	Lig4	99	64.796	Mus_pahari
ENSONIG00000011969	lig4	98	65.017	MGP_SPRETEiJ_G0031917	Lig4	99	64.803	Mus_spretus
ENSONIG00000011969	lig4	98	64.945	ENSMPUG00000018675	LIG4	99	64.615	Mustela_putorius_furo
ENSONIG00000011969	lig4	98	65.604	ENSMLUG00000001267	LIG4	99	65.385	Myotis_lucifugus
ENSONIG00000011969	lig4	98	65.237	ENSNGAG00000013258	Lig4	99	65.127	Nannospalax_galili
ENSONIG00000011969	lig4	99	97.253	ENSNBRG00000021252	lig4	100	97.253	Neolamprologus_brichardi
ENSONIG00000011969	lig4	98	65.457	ENSNLEG00000007888	LIG4	99	65.237	Nomascus_leucogenys
ENSONIG00000011969	lig4	97	65.188	ENSOPRG00000005765	LIG4	99	65.078	Ochotona_princeps
ENSONIG00000011969	lig4	97	64.856	ENSODEG00000019683	LIG4	99	64.634	Octodon_degus
ENSONIG00000011969	lig4	98	65.127	ENSOCUG00000015734	LIG4	99	65.017	Oryctolagus_cuniculus
ENSONIG00000011969	lig4	98	85.291	ENSORLG00000004041	lig4	99	85.510	Oryzias_latipes
ENSONIG00000011969	lig4	98	85.071	ENSORLG00020019607	lig4	99	85.291	Oryzias_latipes_hni
ENSONIG00000011969	lig4	98	85.181	ENSORLG00015017754	lig4	99	85.401	Oryzias_latipes_hsok
ENSONIG00000011969	lig4	74	89.374	ENSOMEG00000003459	lig4	99	89.374	Oryzias_melastigma
ENSONIG00000011969	lig4	98	65.934	ENSOGAG00000032120	LIG4	99	65.824	Otolemur_garnettii
ENSONIG00000011969	lig4	80	69.220	ENSOARG00000005590	LIG4	98	69.220	Ovis_aries
ENSONIG00000011969	lig4	98	65.897	ENSPPAG00000032998	LIG4	99	65.677	Pan_paniscus
ENSONIG00000011969	lig4	98	64.725	ENSPPRG00000017804	LIG4	99	64.396	Panthera_pardus
ENSONIG00000011969	lig4	98	64.615	ENSPTIG00000010051	LIG4	99	64.286	Panthera_tigris_altaica
ENSONIG00000011969	lig4	98	66.007	ENSPTRG00000006025	LIG4	99	65.787	Pan_troglodytes
ENSONIG00000011969	lig4	97	65.891	ENSPANG00000007562	LIG4	99	65.670	Papio_anubis
ENSONIG00000011969	lig4	99	78.266	ENSPKIG00000011645	lig4	99	78.266	Paramormyrops_kingsleyae
ENSONIG00000011969	lig4	99	67.728	ENSPSIG00000001504	LIG4	99	67.508	Pelodiscus_sinensis
ENSONIG00000011969	lig4	97	81.635	ENSPMGG00000013486	lig4	99	80.858	Periophthalmus_magnuspinnatus
ENSONIG00000011969	lig4	98	64.505	ENSPEMG00000000076	Lig4	99	64.396	Peromyscus_maniculatus_bairdii
ENSONIG00000011969	lig4	98	65.604	ENSPCIG00000021882	LIG4	99	65.495	Phascolarctos_cinereus
ENSONIG00000011969	lig4	99	87.500	ENSPFOG00000000797	lig4	99	87.925	Poecilia_formosa
ENSONIG00000011969	lig4	99	87.390	ENSPLAG00000001196	lig4	99	87.816	Poecilia_latipinna
ENSONIG00000011969	lig4	99	87.500	ENSPMEG00000021353	lig4	99	87.925	Poecilia_mexicana
ENSONIG00000011969	lig4	99	87.061	ENSPREG00000007323	lig4	99	87.486	Poecilia_reticulata
ENSONIG00000011969	lig4	98	65.347	ENSPPYG00000005540	LIG4	99	65.127	Pongo_abelii
ENSONIG00000011969	lig4	97	64.784	ENSPVAG00000016403	LIG4	99	64.459	Pteropus_vampyrus
ENSONIG00000011969	lig4	99	97.473	ENSPNYG00000009660	lig4	100	97.473	Pundamilia_nyererei
ENSONIG00000011969	lig4	98	81.698	ENSPNAG00000028069	LIG4	99	81.698	Pygocentrus_nattereri
ENSONIG00000011969	lig4	98	81.698	ENSPNAG00000028056	lig4	99	81.698	Pygocentrus_nattereri
ENSONIG00000011969	lig4	98	64.686	ENSRNOG00000014605	Lig4	99	64.576	Rattus_norvegicus
ENSONIG00000011969	lig4	97	64.895	ENSRBIG00000039962	LIG4	99	64.673	Rhinopithecus_bieti
ENSONIG00000011969	lig4	97	65.559	ENSRROG00000006040	LIG4	99	65.338	Rhinopithecus_roxellana
ENSONIG00000011969	lig4	98	65.385	ENSSBOG00000019029	LIG4	99	65.165	Saimiri_boliviensis_boliviensis
ENSONIG00000011969	lig4	98	63.626	ENSSHAG00000009525	LIG4	99	63.516	Sarcophilus_harrisii
ENSONIG00000011969	lig4	99	79.693	ENSSFOG00015012835	lig4	100	79.693	Scleropages_formosus
ENSONIG00000011969	lig4	99	83.626	ENSSMAG00000011267	lig4	100	83.626	Scophthalmus_maximus
ENSONIG00000011969	lig4	99	87.856	ENSSDUG00000010343	lig4	99	87.952	Seriola_dumerili
ENSONIG00000011969	lig4	99	86.747	ENSSLDG00000003239	lig4	99	86.747	Seriola_lalandi_dorsalis
ENSONIG00000011969	lig4	97	63.757	ENSSARG00000006573	LIG4	99	63.536	Sorex_araneus
ENSONIG00000011969	lig4	91	69.011	ENSSPUG00000002444	LIG4	99	68.892	Sphenodon_punctatus
ENSONIG00000011969	lig4	99	90.319	ENSSPAG00000001609	lig4	99	90.319	Stegastes_partitus
ENSONIG00000011969	lig4	98	65.160	ENSSSCG00000009540	LIG4	99	64.829	Sus_scrofa
ENSONIG00000011969	lig4	97	66.185	ENSTGUG00000010795	LIG4	99	66.185	Taeniopygia_guttata
ENSONIG00000011969	lig4	99	84.598	ENSTRUG00000009984	lig4	99	84.598	Takifugu_rubripes
ENSONIG00000011969	lig4	99	82.288	ENSTNIG00000010348	lig4	99	82.508	Tetraodon_nigroviridis
ENSONIG00000011969	lig4	98	65.677	ENSTBEG00000017741	LIG4	99	65.677	Tupaia_belangeri
ENSONIG00000011969	lig4	98	65.127	ENSTTRG00000012660	LIG4	99	64.906	Tursiops_truncatus
ENSONIG00000011969	lig4	97	64.563	ENSUAMG00000003773	LIG4	99	64.230	Ursus_americanus
ENSONIG00000011969	lig4	99	66.813	ENSXETG00000002654	lig4	99	66.813	Xenopus_tropicalis
ENSONIG00000011969	lig4	99	86.952	ENSXCOG00000017401	lig4	99	87.377	Xiphophorus_couchianus
ENSONIG00000011969	lig4	99	87.500	ENSXMAG00000015142	lig4	99	87.925	Xiphophorus_maculatus