EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000012017 (Gene tree)
Gene ID: -
Gene Symbol: r3hdm1
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 33262 bases
Position: chrGL831144.1:1970912-2004173
Accession: ZDB-GENE-030131-7119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000015126	R3H	PF01424.22	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000015139	-	3237	-	ENSONIP00000015126	1079 (aa)	-	I3K1Y1

Gene Model

Click here to download ENSONIG00000012017's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000012017's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000012017	r3hdm1	85	53.561	ENSONIG00000005075	r3hdm2	94	53.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000012017	r3hdm1	91	66.873	ENSG00000048991	R3HDM1	94	66.873	Homo_sapiens
ENSONIG00000012017	r3hdm1	90	83.890	ENSAPOG00000020850	r3hdm1	92	83.890	Acanthochromis_polyacanthus
ENSONIG00000012017	r3hdm1	98	48.199	ENSAMEG00000014886	R3HDM1	94	48.548	Ailuropoda_melanoleuca
ENSONIG00000012017	r3hdm1	89	82.874	ENSAOCG00000005192	r3hdm1	95	83.071	Amphiprion_ocellaris
ENSONIG00000012017	r3hdm1	85	85.897	ENSAPEG00000016108	r3hdm1	95	86.218	Amphiprion_percula
ENSONIG00000012017	r3hdm1	85	84.103	ENSATEG00000000232	r3hdm1	94	84.533	Anabas_testudineus
ENSONIG00000012017	r3hdm1	99	46.964	ENSAPLG00000015231	R3HDM1	94	47.516	Anas_platyrhynchos
ENSONIG00000012017	r3hdm1	99	45.779	ENSACAG00000001676	R3HDM1	95	46.201	Anolis_carolinensis
ENSONIG00000012017	r3hdm1	91	67.183	ENSANAG00000035334	R3HDM1	94	67.183	Aotus_nancymaae
ENSONIG00000012017	r3hdm1	85	94.498	ENSACLG00000027282	r3hdm1	95	94.498	Astatotilapia_calliptera
ENSONIG00000012017	r3hdm1	65	40.000	ENSAMXG00000020587	arpp21	80	52.889	Astyanax_mexicanus
ENSONIG00000012017	r3hdm1	90	68.320	ENSAMXG00000012861	R3HDM1	93	67.493	Astyanax_mexicanus
ENSONIG00000012017	r3hdm1	99	49.552	ENSAMXG00000003536	r3hdm1	92	50.317	Astyanax_mexicanus
ENSONIG00000012017	r3hdm1	98	46.566	ENSBTAG00000013302	R3HDM1	95	46.175	Bos_taurus
ENSONIG00000012017	r3hdm1	91	67.183	ENSCJAG00000011718	R3HDM1	94	67.183	Callithrix_jacchus
ENSONIG00000012017	r3hdm1	98	48.244	ENSCAFG00000005075	R3HDM1	94	48.463	Canis_familiaris
ENSONIG00000012017	r3hdm1	98	48.244	ENSCAFG00020016119	R3HDM1	87	59.562	Canis_lupus_dingo
ENSONIG00000012017	r3hdm1	98	48.384	ENSCHIG00000020851	R3HDM1	95	48.959	Capra_hircus
ENSONIG00000012017	r3hdm1	98	46.326	ENSCPOG00000012784	R3HDM1	80	67.647	Cavia_porcellus
ENSONIG00000012017	r3hdm1	91	66.873	ENSCCAG00000027199	R3HDM1	94	66.873	Cebus_capucinus
ENSONIG00000012017	r3hdm1	91	67.183	ENSCATG00000023642	R3HDM1	94	67.183	Cercocebus_atys
ENSONIG00000012017	r3hdm1	98	46.460	ENSCLAG00000007962	R3HDM1	80	71.008	Chinchilla_lanigera
ENSONIG00000012017	r3hdm1	98	45.881	ENSCSAG00000016356	R3HDM1	94	46.867	Chlorocebus_sabaeus
ENSONIG00000012017	r3hdm1	81	64.885	ENSCHOG00000013638	R3HDM1	81	62.044	Choloepus_hoffmanni
ENSONIG00000012017	r3hdm1	96	43.905	ENSCPBG00000009645	R3HDM1	99	48.051	Chrysemys_picta_bellii
ENSONIG00000012017	r3hdm1	91	66.873	ENSCANG00000034748	R3HDM1	94	66.873	Colobus_angolensis_palliatus
ENSONIG00000012017	r3hdm1	98	46.140	ENSCGRG00001012357	R3hdm1	91	46.309	Cricetulus_griseus_chok1gshd
ENSONIG00000012017	r3hdm1	98	47.227	ENSCGRG00000012080	R3hdm1	80	71.008	Cricetulus_griseus_crigri
ENSONIG00000012017	r3hdm1	89	69.889	ENSCSEG00000008944	r3hdm1	95	70.926	Cynoglossus_semilaevis
ENSONIG00000012017	r3hdm1	89	77.503	ENSCVAG00000007582	r3hdm1	95	77.606	Cyprinodon_variegatus
ENSONIG00000012017	r3hdm1	98	46.281	ENSDNOG00000000771	R3HDM1	94	46.570	Dasypus_novemcinctus
ENSONIG00000012017	r3hdm1	98	43.173	ENSETEG00000013606	R3HDM1	94	43.739	Echinops_telfairi
ENSONIG00000012017	r3hdm1	93	66.185	ENSEASG00005007392	R3HDM1	94	65.928	Equus_asinus_asinus
ENSONIG00000012017	r3hdm1	93	66.185	ENSECAG00000019114	R3HDM1	94	65.928	Equus_caballus
ENSONIG00000012017	r3hdm1	68	56.987	ENSEEUG00000012589	R3HDM1	69	54.656	Erinaceus_europaeus
ENSONIG00000012017	r3hdm1	98	46.709	ENSELUG00000004909	R3HDM1	98	47.705	Esox_lucius
ENSONIG00000012017	r3hdm1	91	50.047	ENSELUG00000014413	r3hdm1	96	51.187	Esox_lucius
ENSONIG00000012017	r3hdm1	93	66.185	ENSFCAG00000027113	R3HDM1	96	47.928	Felis_catus
ENSONIG00000012017	r3hdm1	74	49.882	ENSFALG00000013731	R3HDM1	89	44.812	Ficedula_albicollis
ENSONIG00000012017	r3hdm1	98	46.864	ENSFDAG00000016478	R3HDM1	91	60.851	Fukomys_damarensis
ENSONIG00000012017	r3hdm1	89	75.123	ENSFHEG00000018713	r3hdm1	95	75.444	Fundulus_heteroclitus
ENSONIG00000012017	r3hdm1	90	64.557	ENSGALG00000012246	R3HDM1	99	63.924	Gallus_gallus
ENSONIG00000012017	r3hdm1	86	77.170	ENSGAFG00000006203	r3hdm1	95	77.682	Gambusia_affinis
ENSONIG00000012017	r3hdm1	93	75.898	ENSGACG00000014925	r3hdm1	99	75.992	Gasterosteus_aculeatus
ENSONIG00000012017	r3hdm1	99	47.520	ENSGAGG00000007840	R3HDM1	94	47.928	Gopherus_agassizii
ENSONIG00000012017	r3hdm1	91	66.873	ENSGGOG00000008156	R3HDM1	94	66.873	Gorilla_gorilla
ENSONIG00000012017	r3hdm1	98	46.953	ENSHGLG00000015718	R3HDM1	81	71.429	Heterocephalus_glaber_female
ENSONIG00000012017	r3hdm1	98	46.774	ENSHGLG00100003184	-	81	71.429	Heterocephalus_glaber_male
ENSONIG00000012017	r3hdm1	85	41.321	ENSHGLG00100015374	-	88	40.957	Heterocephalus_glaber_male
ENSONIG00000012017	r3hdm1	85	69.892	ENSHCOG00000013366	r3hdm1	95	70.000	Hippocampus_comes
ENSONIG00000012017	r3hdm1	86	65.325	ENSIPUG00000013629	r3hdm1	94	47.529	Ictalurus_punctatus
ENSONIG00000012017	r3hdm1	57	37.919	ENSIPUG00000020552	arpp21	84	38.127	Ictalurus_punctatus
ENSONIG00000012017	r3hdm1	82	64.456	ENSIPUG00000001676	R3HDM1	96	50.667	Ictalurus_punctatus
ENSONIG00000012017	r3hdm1	98	48.289	ENSSTOG00000007572	R3HDM1	91	60.215	Ictidomys_tridecemlineatus
ENSONIG00000012017	r3hdm1	99	47.937	ENSLACG00000005334	R3HDM1	99	48.239	Latimeria_chalumnae
ENSONIG00000012017	r3hdm1	99	51.095	ENSLOCG00000001641	r3hdm1	94	50.820	Lepisosteus_oculatus
ENSONIG00000012017	r3hdm1	98	46.816	ENSLAFG00000009065	R3HDM1	99	44.217	Loxodonta_africana
ENSONIG00000012017	r3hdm1	93	66.763	ENSMFAG00000030331	R3HDM1	94	66.873	Macaca_fascicularis
ENSONIG00000012017	r3hdm1	91	66.873	ENSMMUG00000009844	R3HDM1	94	66.873	Macaca_mulatta
ENSONIG00000012017	r3hdm1	93	66.763	ENSMNEG00000027793	R3HDM1	94	66.873	Macaca_nemestrina
ENSONIG00000012017	r3hdm1	91	66.873	ENSMLEG00000043189	R3HDM1	94	66.873	Mandrillus_leucophaeus
ENSONIG00000012017	r3hdm1	89	83.625	ENSMAMG00000004532	r3hdm1	95	83.625	Mastacembelus_armatus
ENSONIG00000012017	r3hdm1	89	94.318	ENSMZEG00005003157	r3hdm1	95	94.318	Maylandia_zebra
ENSONIG00000012017	r3hdm1	99	46.828	ENSMGAG00000012461	R3HDM1	94	47.641	Meleagris_gallopavo
ENSONIG00000012017	r3hdm1	98	46.524	ENSMAUG00000010315	R3hdm1	80	71.008	Mesocricetus_auratus
ENSONIG00000012017	r3hdm1	85	66.563	ENSMICG00000042655	-	90	66.563	Microcebus_murinus
ENSONIG00000012017	r3hdm1	91	66.873	ENSMICG00000005900	-	94	66.873	Microcebus_murinus
ENSONIG00000012017	r3hdm1	91	45.956	ENSMODG00000000923	R3HDM1	92	45.996	Monodelphis_domestica
ENSONIG00000012017	r3hdm1	98	80.697	ENSMALG00000009000	r3hdm1	94	80.132	Monopterus_albus
ENSONIG00000012017	r3hdm1	98	45.789	MGP_CAROLIEiJ_G0014543	R3hdm1	80	71.008	Mus_caroli
ENSONIG00000012017	r3hdm1	98	45.617	ENSMUSG00000056211	R3hdm1	80	71.008	Mus_musculus
ENSONIG00000012017	r3hdm1	98	45.430	MGP_PahariEiJ_G0027779	R3hdm1	80	71.008	Mus_pahari
ENSONIG00000012017	r3hdm1	98	45.789	MGP_SPRETEiJ_G0015350	R3hdm1	80	71.008	Mus_spretus
ENSONIG00000012017	r3hdm1	98	48.015	ENSMPUG00000002412	R3HDM1	95	48.235	Mustela_putorius_furo
ENSONIG00000012017	r3hdm1	98	48.063	ENSMLUG00000013824	R3HDM1	95	48.285	Myotis_lucifugus
ENSONIG00000012017	r3hdm1	91	66.873	ENSNLEG00000008622	R3HDM1	94	66.873	Nomascus_leucogenys
ENSONIG00000012017	r3hdm1	88	41.121	ENSMEUG00000011784	R3HDM1	94	41.607	Notamacropus_eugenii
ENSONIG00000012017	r3hdm1	98	45.748	ENSODEG00000008607	R3HDM1	80	71.429	Octodon_degus
ENSONIG00000012017	r3hdm1	98	46.452	ENSOANG00000007987	R3HDM1	95	46.553	Ornithorhynchus_anatinus
ENSONIG00000012017	r3hdm1	90	49.847	ENSOCUG00000017366	R3HDM1	92	50.711	Oryctolagus_cuniculus
ENSONIG00000012017	r3hdm1	89	71.372	ENSORLG00000004297	r3hdm1	94	74.864	Oryzias_latipes
ENSONIG00000012017	r3hdm1	89	73.967	ENSORLG00015017355	r3hdm1	95	74.587	Oryzias_latipes_hsok
ENSONIG00000012017	r3hdm1	98	48.292	ENSOGAG00000003136	R3HDM1	95	48.600	Otolemur_garnettii
ENSONIG00000012017	r3hdm1	98	48.107	ENSOARG00000010788	R3HDM1	95	48.959	Ovis_aries
ENSONIG00000012017	r3hdm1	91	66.873	ENSPPAG00000027858	R3HDM1	94	66.873	Pan_paniscus
ENSONIG00000012017	r3hdm1	91	65.635	ENSPPRG00000002626	R3HDM1	94	65.635	Panthera_pardus
ENSONIG00000012017	r3hdm1	91	66.563	ENSPTIG00000016581	R3HDM1	94	66.563	Panthera_tigris_altaica
ENSONIG00000012017	r3hdm1	91	66.873	ENSPTRG00000012494	R3HDM1	94	66.873	Pan_troglodytes
ENSONIG00000012017	r3hdm1	91	66.873	ENSPANG00000026448	R3HDM1	94	66.873	Papio_anubis
ENSONIG00000012017	r3hdm1	89	66.667	ENSPKIG00000004328	r3hdm1	90	67.385	Paramormyrops_kingsleyae
ENSONIG00000012017	r3hdm1	99	46.841	ENSPSIG00000012915	R3HDM1	94	47.473	Pelodiscus_sinensis
ENSONIG00000012017	r3hdm1	98	46.243	ENSPEMG00000015187	R3hdm1	80	71.008	Peromyscus_maniculatus_bairdii
ENSONIG00000012017	r3hdm1	93	38.178	ENSPMAG00000003369	-	99	39.130	Petromyzon_marinus
ENSONIG00000012017	r3hdm1	93	65.130	ENSPCIG00000002491	R3HDM1	94	64.305	Phascolarctos_cinereus
ENSONIG00000012017	r3hdm1	89	74.241	ENSPFOG00000015036	r3hdm1	95	74.241	Poecilia_formosa
ENSONIG00000012017	r3hdm1	85	77.503	ENSPLAG00000018042	r3hdm1	94	77.503	Poecilia_latipinna
ENSONIG00000012017	r3hdm1	85	77.097	ENSPMEG00000023947	r3hdm1	94	77.097	Poecilia_mexicana
ENSONIG00000012017	r3hdm1	89	77.254	ENSPREG00000007902	r3hdm1	95	77.459	Poecilia_reticulata
ENSONIG00000012017	r3hdm1	98	46.898	ENSPPYG00000012815	R3HDM1	94	47.645	Pongo_abelii
ENSONIG00000012017	r3hdm1	91	66.923	ENSPCAG00000006208	R3HDM1	88	65.714	Procavia_capensis
ENSONIG00000012017	r3hdm1	87	70.819	ENSPCOG00000012698	R3HDM1	92	70.819	Propithecus_coquereli
ENSONIG00000012017	r3hdm1	98	43.094	ENSPVAG00000006098	R3HDM1	95	43.103	Pteropus_vampyrus
ENSONIG00000012017	r3hdm1	99	49.508	ENSPNAG00000013952	r3hdm1	93	50.450	Pygocentrus_nattereri
ENSONIG00000012017	r3hdm1	85	69.497	ENSPNAG00000005436	R3HDM1	96	67.702	Pygocentrus_nattereri
ENSONIG00000012017	r3hdm1	98	45.350	ENSRNOG00000004099	R3hdm1	94	46.086	Rattus_norvegicus
ENSONIG00000012017	r3hdm1	87	70.922	ENSRBIG00000033317	R3HDM1	99	70.922	Rhinopithecus_bieti
ENSONIG00000012017	r3hdm1	91	66.873	ENSRROG00000034534	R3HDM1	94	66.873	Rhinopithecus_roxellana
ENSONIG00000012017	r3hdm1	91	67.183	ENSSBOG00000020389	R3HDM1	94	67.183	Saimiri_boliviensis_boliviensis
ENSONIG00000012017	r3hdm1	98	47.553	ENSSHAG00000016999	R3HDM1	95	47.736	Sarcophilus_harrisii
ENSONIG00000012017	r3hdm1	90	68.232	ENSSFOG00015014134	r3hdm1	93	67.403	Scleropages_formosus
ENSONIG00000012017	r3hdm1	98	48.801	ENSSFOG00015019851	-	93	60.460	Scleropages_formosus
ENSONIG00000012017	r3hdm1	99	78.827	ENSSMAG00000001669	r3hdm1	95	78.827	Scophthalmus_maximus
ENSONIG00000012017	r3hdm1	89	85.992	ENSSDUG00000010749	r3hdm1	95	86.401	Seriola_dumerili
ENSONIG00000012017	r3hdm1	99	85.860	ENSSLDG00000004499	r3hdm1	94	86.140	Seriola_lalandi_dorsalis
ENSONIG00000012017	r3hdm1	56	58.261	ENSSARG00000000352	-	57	57.600	Sorex_araneus
ENSONIG00000012017	r3hdm1	99	46.655	ENSSPUG00000004167	R3HDM1	95	47.653	Sphenodon_punctatus
ENSONIG00000012017	r3hdm1	89	86.673	ENSSPAG00000004648	r3hdm1	95	86.673	Stegastes_partitus
ENSONIG00000012017	r3hdm1	91	63.158	ENSSSCG00000015692	R3HDM1	94	63.158	Sus_scrofa
ENSONIG00000012017	r3hdm1	99	47.593	ENSTGUG00000011750	R3HDM1	94	47.866	Taeniopygia_guttata
ENSONIG00000012017	r3hdm1	85	76.017	ENSTRUG00000011654	r3hdm1	94	75.424	Takifugu_rubripes
ENSONIG00000012017	r3hdm1	90	70.329	ENSTNIG00000010362	r3hdm1	96	70.945	Tetraodon_nigroviridis
ENSONIG00000012017	r3hdm1	89	51.169	ENSTTRG00000003935	R3HDM1	85	51.661	Tursiops_truncatus
ENSONIG00000012017	r3hdm1	61	67.492	ENSUAMG00000024806	R3HDM1	85	66.563	Ursus_americanus
ENSONIG00000012017	r3hdm1	91	66.563	ENSUMAG00000005552	R3HDM1	94	66.563	Ursus_maritimus
ENSONIG00000012017	r3hdm1	92	45.784	ENSVPAG00000007333	R3HDM1	87	45.366	Vicugna_pacos
ENSONIG00000012017	r3hdm1	91	66.563	ENSVVUG00000006457	R3HDM1	94	48.351	Vulpes_vulpes
ENSONIG00000012017	r3hdm1	85	45.784	ENSXETG00000019330	r3hdm1	92	45.483	Xenopus_tropicalis
ENSONIG00000012017	r3hdm1	69	73.873	ENSXCOG00000017448	r3hdm1	92	74.138	Xiphophorus_couchianus
ENSONIG00000012017	r3hdm1	89	73.819	ENSXMAG00000007885	r3hdm1	95	74.016	Xiphophorus_maculatus