EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000012089 (Gene tree)
Gene ID: 100699309
Gene Symbol: apex1
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 3865 bases
Position: chrGL831213.1:2430838-2434702
Accession: 100699309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000015216	Exo_endo_phos	PF03372.23	2.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000015229	-	2032	-	ENSONIP00000015216	310 (aa)	XP_003449841	I3K271

Gene Model

Click here to download ENSONIG00000012089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000012089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000012089	apex1	99	66.352	ENSG00000100823	APEX1	87	71.942	Homo_sapiens
ENSONIG00000012089	apex1	100	88.387	ENSAPOG00000017002	apex1	97	90.169	Acanthochromis_polyacanthus
ENSONIG00000012089	apex1	99	66.456	ENSAMEG00000005418	APEX1	87	70.863	Ailuropoda_melanoleuca
ENSONIG00000012089	apex1	89	94.224	ENSACIG00000010653	apex1	94	94.224	Amphilophus_citrinellus
ENSONIG00000012089	apex1	100	89.355	ENSAOCG00000009649	apex1	95	90.169	Amphiprion_ocellaris
ENSONIG00000012089	apex1	100	89.677	ENSAPEG00000021453	apex1	95	90.508	Amphiprion_percula
ENSONIG00000012089	apex1	99	91.909	ENSATEG00000002883	apex1	97	91.909	Anabas_testudineus
ENSONIG00000012089	apex1	99	70.476	ENSACAG00000008099	APEX1	87	75.090	Anolis_carolinensis
ENSONIG00000012089	apex1	99	67.405	ENSANAG00000030117	APEX1	87	72.302	Aotus_nancymaae
ENSONIG00000012089	apex1	100	99.355	ENSACLG00000018441	apex1	100	99.355	Astatotilapia_calliptera
ENSONIG00000012089	apex1	99	87.419	ENSAMXG00000034699	apex1	89	90.975	Astyanax_mexicanus
ENSONIG00000012089	apex1	99	66.139	ENSBTAG00000002745	APEX1	87	70.144	Bos_taurus
ENSONIG00000012089	apex1	98	43.137	WBGene00001372	exo-3	92	44.944	Caenorhabditis_elegans
ENSONIG00000012089	apex1	99	67.405	ENSCJAG00000009726	APEX1	87	72.302	Callithrix_jacchus
ENSONIG00000012089	apex1	99	66.772	ENSCAFG00000032033	APEX1	87	71.583	Canis_familiaris
ENSONIG00000012089	apex1	53	60.000	ENSCAFG00020023002	-	73	68.182	Canis_lupus_dingo
ENSONIG00000012089	apex1	99	66.772	ENSCAFG00020014377	-	87	71.583	Canis_lupus_dingo
ENSONIG00000012089	apex1	87	57.196	ENSCHIG00000014537	-	86	57.196	Capra_hircus
ENSONIG00000012089	apex1	99	66.139	ENSCHIG00000007298	-	87	70.144	Capra_hircus
ENSONIG00000012089	apex1	99	65.506	ENSTSYG00000034813	APEX1	87	70.144	Carlito_syrichta
ENSONIG00000012089	apex1	87	66.058	ENSCAPG00000016235	APEX1	91	72.458	Cavia_aperea
ENSONIG00000012089	apex1	99	68.038	ENSCPOG00000030909	APEX1	87	72.662	Cavia_porcellus
ENSONIG00000012089	apex1	99	57.911	ENSCCAG00000031931	-	87	61.871	Cebus_capucinus
ENSONIG00000012089	apex1	99	67.405	ENSCCAG00000033056	-	87	72.302	Cebus_capucinus
ENSONIG00000012089	apex1	99	67.405	ENSCATG00000015580	APEX1	87	71.583	Cercocebus_atys
ENSONIG00000012089	apex1	99	67.089	ENSCLAG00000001002	APEX1	87	71.942	Chinchilla_lanigera
ENSONIG00000012089	apex1	99	67.722	ENSCSAG00000016685	-	87	71.942	Chlorocebus_sabaeus
ENSONIG00000012089	apex1	99	67.722	ENSCSAG00000016670	-	87	71.942	Chlorocebus_sabaeus
ENSONIG00000012089	apex1	99	71.519	ENSCPBG00000009567	APEX1	87	76.895	Chrysemys_picta_bellii
ENSONIG00000012089	apex1	99	55.556	ENSCING00000008137	-	85	59.925	Ciona_intestinalis
ENSONIG00000012089	apex1	96	49.671	ENSCSAVG00000007144	-	100	55.039	Ciona_savignyi
ENSONIG00000012089	apex1	99	67.089	ENSCANG00000030726	APEX1	87	71.942	Colobus_angolensis_palliatus
ENSONIG00000012089	apex1	99	65.931	ENSCGRG00001017046	Apex1	88	70.504	Cricetulus_griseus_chok1gshd
ENSONIG00000012089	apex1	99	65.931	ENSCGRG00000008984	Apex1	88	70.504	Cricetulus_griseus_crigri
ENSONIG00000012089	apex1	100	88.710	ENSCSEG00000017499	apex1	99	88.710	Cynoglossus_semilaevis
ENSONIG00000012089	apex1	100	91.935	ENSCVAG00000022075	apex1	100	91.935	Cyprinodon_variegatus
ENSONIG00000012089	apex1	99	85.437	ENSDARG00000045843	apex1	91	87.619	Danio_rerio
ENSONIG00000012089	apex1	99	63.291	ENSDNOG00000042234	APEX1	82	67.626	Dasypus_novemcinctus
ENSONIG00000012089	apex1	99	66.139	ENSDORG00000001616	Apex1	87	70.863	Dipodomys_ordii
ENSONIG00000012089	apex1	99	67.089	ENSETEG00000004855	-	87	71.583	Echinops_telfairi
ENSONIG00000012089	apex1	76	60.504	ENSEBUG00000000622	-	92	60.504	Eptatretus_burgeri
ENSONIG00000012089	apex1	99	66.562	ENSEASG00005017489	APEX1	64	71.583	Equus_asinus_asinus
ENSONIG00000012089	apex1	99	66.562	ENSECAG00000022325	APEX1	71	71.583	Equus_caballus
ENSONIG00000012089	apex1	86	71.004	ENSEEUG00000012569	APEX1	93	70.896	Erinaceus_europaeus
ENSONIG00000012089	apex1	99	82.258	ENSELUG00000021706	apex1	88	88.043	Esox_lucius
ENSONIG00000012089	apex1	99	67.089	ENSFCAG00000030869	APEX1	87	71.942	Felis_catus
ENSONIG00000012089	apex1	99	67.405	ENSFDAG00000006120	APEX1	87	72.302	Fukomys_damarensis
ENSONIG00000012089	apex1	100	91.290	ENSFHEG00000009031	apex1	83	91.290	Fundulus_heteroclitus
ENSONIG00000012089	apex1	100	77.814	ENSGMOG00000007943	apex1	89	80.072	Gadus_morhua
ENSONIG00000012089	apex1	100	91.613	ENSGAFG00000005311	apex1	100	91.613	Gambusia_affinis
ENSONIG00000012089	apex1	100	89.355	ENSGACG00000019497	apex1	99	91.353	Gasterosteus_aculeatus
ENSONIG00000012089	apex1	99	71.203	ENSGAGG00000014999	APEX1	87	76.812	Gopherus_agassizii
ENSONIG00000012089	apex1	99	66.038	ENSGGOG00000002128	APEX1	87	71.583	Gorilla_gorilla
ENSONIG00000012089	apex1	100	99.032	ENSHBUG00000005894	apex1	100	99.032	Haplochromis_burtoni
ENSONIG00000012089	apex1	99	67.089	ENSHGLG00000002848	APEX1	87	72.302	Heterocephalus_glaber_female
ENSONIG00000012089	apex1	99	67.089	ENSHGLG00100017878	APEX1	87	72.302	Heterocephalus_glaber_male
ENSONIG00000012089	apex1	100	87.460	ENSHCOG00000009961	apex1	89	89.892	Hippocampus_comes
ENSONIG00000012089	apex1	99	84.839	ENSIPUG00000005799	apex1	89	88.087	Ictalurus_punctatus
ENSONIG00000012089	apex1	99	67.405	ENSSTOG00000010096	APEX1	87	72.302	Ictidomys_tridecemlineatus
ENSONIG00000012089	apex1	90	62.366	ENSJJAG00000020465	-	89	62.230	Jaculus_jaculus
ENSONIG00000012089	apex1	99	65.823	ENSJJAG00000012067	-	87	70.504	Jaculus_jaculus
ENSONIG00000012089	apex1	99	59.494	ENSJJAG00000003660	-	87	62.590	Jaculus_jaculus
ENSONIG00000012089	apex1	100	91.290	ENSKMAG00000021171	apex1	100	91.290	Kryptolebias_marmoratus
ENSONIG00000012089	apex1	100	89.032	ENSLBEG00000010248	apex1	100	89.032	Labrus_bergylta
ENSONIG00000012089	apex1	99	73.397	ENSLACG00000008617	APEX1	88	78.339	Latimeria_chalumnae
ENSONIG00000012089	apex1	99	78.594	ENSLOCG00000015516	apex1	87	82.671	Lepisosteus_oculatus
ENSONIG00000012089	apex1	99	67.089	ENSLAFG00000021872	APEX1	87	71.942	Loxodonta_africana
ENSONIG00000012089	apex1	99	66.772	ENSMFAG00000002565	APEX1	87	71.583	Macaca_fascicularis
ENSONIG00000012089	apex1	99	66.772	ENSMMUG00000048039	APEX1	87	71.583	Macaca_mulatta
ENSONIG00000012089	apex1	99	66.877	ENSMNEG00000036944	APEX1	87	71.583	Macaca_nemestrina
ENSONIG00000012089	apex1	99	67.405	ENSMLEG00000042125	APEX1	87	71.583	Mandrillus_leucophaeus
ENSONIG00000012089	apex1	100	91.290	ENSMAMG00000023526	apex1	100	91.290	Mastacembelus_armatus
ENSONIG00000012089	apex1	100	99.355	ENSMZEG00005014187	apex1	100	99.355	Maylandia_zebra
ENSONIG00000012089	apex1	99	66.139	ENSMAUG00000013994	Apex1	88	70.144	Mesocricetus_auratus
ENSONIG00000012089	apex1	99	65.615	ENSMICG00000043554	APEX1	87	70.504	Microcebus_murinus
ENSONIG00000012089	apex1	99	66.984	ENSMOCG00000013721	Apex1	88	71.583	Microtus_ochrogaster
ENSONIG00000012089	apex1	100	87.781	ENSMMOG00000010031	apex1	87	90.288	Mola_mola
ENSONIG00000012089	apex1	91	68.905	ENSMODG00000007125	APEX1	87	69.424	Monodelphis_domestica
ENSONIG00000012089	apex1	90	84.286	ENSMALG00000011699	apex1	74	84.116	Monopterus_albus
ENSONIG00000012089	apex1	99	67.834	MGP_CAROLIEiJ_G0019209	Apex1	87	72.202	Mus_caroli
ENSONIG00000012089	apex1	99	67.619	ENSMUSG00000035960	Apex1	88	71.942	Mus_musculus
ENSONIG00000012089	apex1	99	67.937	MGP_PahariEiJ_G0030232	Apex1	88	71.942	Mus_pahari
ENSONIG00000012089	apex1	99	67.619	MGP_SPRETEiJ_G0020101	Apex1	88	71.942	Mus_spretus
ENSONIG00000012089	apex1	99	65.094	ENSMLUG00000028957	APEX1	87	70.504	Myotis_lucifugus
ENSONIG00000012089	apex1	87	54.152	ENSNGAG00000021748	-	72	57.741	Nannospalax_galili
ENSONIG00000012089	apex1	99	66.139	ENSNGAG00000002725	-	87	71.223	Nannospalax_galili
ENSONIG00000012089	apex1	100	99.355	ENSNBRG00000005334	apex1	91	99.355	Neolamprologus_brichardi
ENSONIG00000012089	apex1	99	66.038	ENSNLEG00000010839	APEX1	89	71.583	Nomascus_leucogenys
ENSONIG00000012089	apex1	99	66.134	ENSMEUG00000014519	APEX1	89	69.065	Notamacropus_eugenii
ENSONIG00000012089	apex1	99	66.456	ENSOPRG00000014029	APEX1	88	70.144	Ochotona_princeps
ENSONIG00000012089	apex1	99	52.484	ENSODEG00000006583	-	86	55.634	Octodon_degus
ENSONIG00000012089	apex1	99	67.089	ENSODEG00000001703	-	87	71.942	Octodon_degus
ENSONIG00000012089	apex1	95	53.220	ENSODEG00000004777	-	83	58.730	Octodon_degus
ENSONIG00000012089	apex1	88	70.182	ENSOANG00000008836	APEX1	68	70.182	Ornithorhynchus_anatinus
ENSONIG00000012089	apex1	99	67.089	ENSOCUG00000005022	APEX1	87	71.583	Oryctolagus_cuniculus
ENSONIG00000012089	apex1	100	89.711	ENSORLG00000012378	apex1	95	90.169	Oryzias_latipes
ENSONIG00000012089	apex1	100	89.711	ENSORLG00020021371	apex1	95	90.169	Oryzias_latipes_hni
ENSONIG00000012089	apex1	100	89.711	ENSORLG00015020089	apex1	95	90.169	Oryzias_latipes_hsok
ENSONIG00000012089	apex1	100	90.675	ENSOMEG00000018876	apex1	95	90.847	Oryzias_melastigma
ENSONIG00000012089	apex1	99	66.772	ENSOGAG00000013335	-	87	71.583	Otolemur_garnettii
ENSONIG00000012089	apex1	90	63.441	ENSOGAG00000029355	-	88	63.309	Otolemur_garnettii
ENSONIG00000012089	apex1	96	63.399	ENSOARG00000001876	-	87	67.164	Ovis_aries
ENSONIG00000012089	apex1	96	56.291	ENSOARG00000014424	-	89	58.633	Ovis_aries
ENSONIG00000012089	apex1	99	66.456	ENSOARG00000019740	-	87	70.504	Ovis_aries
ENSONIG00000012089	apex1	99	66.352	ENSPPAG00000038760	APEX1	89	71.942	Pan_paniscus
ENSONIG00000012089	apex1	99	67.089	ENSPPRG00000011794	APEX1	87	71.942	Panthera_pardus
ENSONIG00000012089	apex1	99	67.089	ENSPTIG00000014829	APEX1	87	71.942	Panthera_tigris_altaica
ENSONIG00000012089	apex1	99	66.352	ENSPTRG00000006093	APEX1	89	71.942	Pan_troglodytes
ENSONIG00000012089	apex1	99	67.405	ENSPANG00000022757	APEX1	87	71.583	Papio_anubis
ENSONIG00000012089	apex1	89	87.681	ENSPKIG00000003504	apex1	88	87.365	Paramormyrops_kingsleyae
ENSONIG00000012089	apex1	88	78.022	ENSPMGG00000016596	apex1	80	78.022	Periophthalmus_magnuspinnatus
ENSONIG00000012089	apex1	99	66.562	ENSPEMG00000019097	Apex1	88	70.863	Peromyscus_maniculatus_bairdii
ENSONIG00000012089	apex1	92	72.822	ENSPMAG00000007275	-	94	74.007	Petromyzon_marinus
ENSONIG00000012089	apex1	90	69.176	ENSPCIG00000023274	APEX1	87	69.065	Phascolarctos_cinereus
ENSONIG00000012089	apex1	100	90.968	ENSPFOG00000004178	apex1	100	90.968	Poecilia_formosa
ENSONIG00000012089	apex1	100	91.290	ENSPLAG00000012779	apex1	100	91.290	Poecilia_latipinna
ENSONIG00000012089	apex1	100	90.968	ENSPMEG00000019623	apex1	100	90.968	Poecilia_mexicana
ENSONIG00000012089	apex1	100	89.677	ENSPREG00000014298	apex1	99	89.677	Poecilia_reticulata
ENSONIG00000012089	apex1	99	66.038	ENSPPYG00000005565	APEX1	87	71.583	Pongo_abelii
ENSONIG00000012089	apex1	99	65.615	ENSPCAG00000010376	APEX1	87	70.144	Procavia_capensis
ENSONIG00000012089	apex1	99	65.931	ENSPCOG00000021564	APEX1	87	70.863	Propithecus_coquereli
ENSONIG00000012089	apex1	99	66.038	ENSPVAG00000010736	APEX1	87	71.223	Pteropus_vampyrus
ENSONIG00000012089	apex1	100	99.677	ENSPNYG00000023940	apex1	100	99.677	Pundamilia_nyererei
ENSONIG00000012089	apex1	92	86.014	ENSPNAG00000020897	apex1	85	90.909	Pygocentrus_nattereri
ENSONIG00000012089	apex1	99	66.984	ENSRNOG00000009663	Apex1	88	71.583	Rattus_norvegicus
ENSONIG00000012089	apex1	99	67.722	ENSRBIG00000038325	APEX1	86	71.942	Rhinopithecus_bieti
ENSONIG00000012089	apex1	99	67.405	ENSSBOG00000018921	-	87	72.302	Saimiri_boliviensis_boliviensis
ENSONIG00000012089	apex1	99	60.323	ENSSBOG00000031372	-	90	63.309	Saimiri_boliviensis_boliviensis
ENSONIG00000012089	apex1	100	63.376	ENSSHAG00000013524	APEX1	87	68.327	Sarcophilus_harrisii
ENSONIG00000012089	apex1	99	82.848	ENSSFOG00015001948	apex1	89	86.643	Scleropages_formosus
ENSONIG00000012089	apex1	100	87.302	ENSSMAG00000013348	apex1	88	90.614	Scophthalmus_maximus
ENSONIG00000012089	apex1	100	90.323	ENSSDUG00000016377	apex1	99	90.323	Seriola_dumerili
ENSONIG00000012089	apex1	100	90.000	ENSSLDG00000023005	apex1	100	90.000	Seriola_lalandi_dorsalis
ENSONIG00000012089	apex1	90	73.571	ENSSPUG00000000531	APEX1	93	73.913	Sphenodon_punctatus
ENSONIG00000012089	apex1	100	89.032	ENSSPAG00000000458	apex1	100	89.032	Stegastes_partitus
ENSONIG00000012089	apex1	99	66.456	ENSSSCG00000040060	-	87	71.223	Sus_scrofa
ENSONIG00000012089	apex1	95	40.264	ENSSSCG00000039705	-	89	42.238	Sus_scrofa
ENSONIG00000012089	apex1	76	59.149	ENSTGUG00000014378	APEX1	100	59.149	Taeniopygia_guttata
ENSONIG00000012089	apex1	100	85.304	ENSTRUG00000004268	apex1	84	89.170	Takifugu_rubripes
ENSONIG00000012089	apex1	100	85.161	ENSTNIG00000005778	apex1	90	88.448	Tetraodon_nigroviridis
ENSONIG00000012089	apex1	99	63.608	ENSTBEG00000006405	APEX1	87	68.231	Tupaia_belangeri
ENSONIG00000012089	apex1	76	70.213	ENSTTRG00000007860	APEX1	100	70.213	Tursiops_truncatus
ENSONIG00000012089	apex1	99	66.456	ENSUAMG00000010457	APEX1	87	70.863	Ursus_americanus
ENSONIG00000012089	apex1	99	66.456	ENSUMAG00000009178	APEX1	87	70.863	Ursus_maritimus
ENSONIG00000012089	apex1	76	66.809	ENSVPAG00000005083	APEX1	100	66.809	Vicugna_pacos
ENSONIG00000012089	apex1	99	66.456	ENSVVUG00000009010	APEX1	87	71.223	Vulpes_vulpes
ENSONIG00000012089	apex1	99	70.701	ENSXETG00000024773	apex1	87	74.909	Xenopus_tropicalis
ENSONIG00000012089	apex1	100	90.968	ENSXCOG00000015233	apex1	99	90.968	Xiphophorus_couchianus
ENSONIG00000012089	apex1	100	90.968	ENSXMAG00000006195	apex1	100	90.968	Xiphophorus_maculatus