EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000012236 (Gene tree)
Gene ID: -
Gene Symbol: zc3h13
Alias: -
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 11874 bases
Position: chrGL831144.1:7170281-7182154
Accession: 100700170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000015413	zf-CCCH	PF00642.24	8.7e-06	1	1
ENSONIP00000015412	zf-CCCH	PF00642.24	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000015426	-	4878	-	ENSONIP00000015413	1626 (aa)	-	I3K2R8
ENSONIT00000015425	-	7423	-	ENSONIP00000015412	1852 (aa)	XP_013124396	I3K2R7

Gene Model

Click here to download ENSONIG00000012236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000012236's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000012236	zc3h13	50	74.197	ENSAPEG00000004887	zc3h13	51	80.795	Amphiprion_percula
ENSONIG00000012236	zc3h13	52	81.153	ENSATEG00000003937	zc3h13	51	81.451	Anabas_testudineus
ENSONIG00000012236	zc3h13	93	52.580	ENSAPLG00000002707	ZC3H13	62	62.174	Anas_platyrhynchos
ENSONIG00000012236	zc3h13	100	97.194	ENSACLG00000027909	zc3h13	100	97.194	Astatotilapia_calliptera
ENSONIG00000012236	zc3h13	50	69.908	ENSCSEG00000010275	zc3h13	50	69.362	Cynoglossus_semilaevis
ENSONIG00000012236	zc3h13	51	73.958	ENSCVAG00000014663	zc3h13	51	73.416	Cyprinodon_variegatus
ENSONIG00000012236	zc3h13	90	71.429	ENSGACG00000015166	zc3h13	97	70.820	Gasterosteus_aculeatus
ENSONIG00000012236	zc3h13	100	97.033	ENSHBUG00000007100	zc3h13	51	96.134	Haplochromis_burtoni
ENSONIG00000012236	zc3h13	90	75.543	ENSKMAG00000010701	zc3h13	99	74.043	Kryptolebias_marmoratus
ENSONIG00000012236	zc3h13	55	68.493	ENSLACG00000003806	ZC3H13	57	69.082	Latimeria_chalumnae
ENSONIG00000012236	zc3h13	100	97.192	ENSMZEG00005007473	zc3h13	100	97.192	Maylandia_zebra
ENSONIG00000012236	zc3h13	51	46.028	ENSMODG00000014969	ZC3H13	66	66.366	Monodelphis_domestica
ENSONIG00000012236	zc3h13	50	67.612	ENSORLG00000005201	zc3h13	51	66.594	Oryzias_latipes
ENSONIG00000012236	zc3h13	50	66.991	ENSORLG00020016576	zc3h13	51	65.401	Oryzias_latipes_hni
ENSONIG00000012236	zc3h13	50	67.791	ENSORLG00015014966	zc3h13	51	66.557	Oryzias_latipes_hsok
ENSONIG00000012236	zc3h13	54	60.474	ENSPPAG00000034465	ZC3H13	52	63.768	Pan_paniscus
ENSONIG00000012236	zc3h13	70	64.213	ENSPKIG00000019756	zc3h13	68	80.282	Paramormyrops_kingsleyae
ENSONIG00000012236	zc3h13	53	70.000	ENSPCIG00000029529	ZC3H13	60	69.565	Phascolarctos_cinereus
ENSONIG00000012236	zc3h13	72	83.088	ENSPMEG00000006928	zc3h13	51	70.023	Poecilia_mexicana
ENSONIG00000012236	zc3h13	69	76.667	ENSPCAG00000001146	ZC3H13	69	70.492	Procavia_capensis
ENSONIG00000012236	zc3h13	50	54.386	ENSPNAG00000011008	zc3h13	68	70.339	Pygocentrus_nattereri
ENSONIG00000012236	zc3h13	50	70.106	ENSSMAG00000007110	zc3h13	52	71.136	Scophthalmus_maximus
ENSONIG00000012236	zc3h13	54	63.256	ENSSPUG00000013358	ZC3H13	57	65.174	Sphenodon_punctatus
ENSONIG00000012236	zc3h13	91	71.429	ENSTNIG00000014523	zc3h13	93	76.623	Tetraodon_nigroviridis
ENSONIG00000012236	zc3h13	55	50.392	ENSUMAG00000016220	ZC3H13	89	50.943	Ursus_maritimus
ENSONIG00000012236	zc3h13	63	64.894	ENSVPAG00000005179	ZC3H13	74	64.894	Vicugna_pacos
ENSONIG00000012236	zc3h13	88	60.000	ENSXETG00000014637	zc3h13	97	48.354	Xenopus_tropicalis