EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000012527 (Gene tree)
Gene ID: -
Gene Symbol: mrps18c
Alias: -
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 1602 bases
Position: chrGL831271.1:580879-582480
Accession: ZDB-GENE-060503-609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000015770	Ribosomal_S18	PF01084.20	1.3e-21	1	1
ENSONIP00000015769	Ribosomal_S18	PF01084.20	2.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000015785	-	306	-	ENSONIP00000015770	101 (aa)	-	I3K3S5
ENSONIT00000015784	-	414	-	ENSONIP00000015769	137 (aa)	-	I3K3S4

Gene Model

Click here to download ENSONIG00000012527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000012527's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000012527	mrps18c	91	88.043	ENSAPOG00000019045	mrps18c	100	73.077	Acanthochromis_polyacanthus
ENSONIG00000012527	mrps18c	91	88.043	ENSACIG00000020253	mrps18c	91	88.043	Amphilophus_citrinellus
ENSONIG00000012527	mrps18c	91	89.130	ENSAOCG00000014338	mrps18c	100	74.615	Amphiprion_ocellaris
ENSONIG00000012527	mrps18c	86	89.655	ENSAPEG00000023068	-	94	82.000	Amphiprion_percula
ENSONIG00000012527	mrps18c	91	89.130	ENSAPEG00000022956	mrps18c	100	73.846	Amphiprion_percula
ENSONIG00000012527	mrps18c	91	82.609	ENSATEG00000023417	mrps18c	100	70.000	Anabas_testudineus
ENSONIG00000012527	mrps18c	88	67.416	ENSAPLG00000012544	-	86	67.416	Anas_platyrhynchos
ENSONIG00000012527	mrps18c	93	96.809	ENSACLG00000010521	mrps18c	91	97.849	Astatotilapia_calliptera
ENSONIG00000012527	mrps18c	90	78.022	ENSAMXG00000012238	mrps18c	92	78.022	Astyanax_mexicanus
ENSONIG00000012527	mrps18c	97	63.265	ENSCPBG00000007783	-	65	58.491	Chrysemys_picta_bellii
ENSONIG00000012527	mrps18c	90	81.319	ENSCSEG00000000711	mrps18c	97	55.660	Cynoglossus_semilaevis
ENSONIG00000012527	mrps18c	91	81.522	ENSCVAG00000020169	mrps18c	100	69.231	Cyprinodon_variegatus
ENSONIG00000012527	mrps18c	94	73.684	ENSDARG00000069624	mrps18c	99	59.259	Danio_rerio
ENSONIG00000012527	mrps18c	100	74.257	ENSELUG00000024603	mrps18c	100	58.647	Esox_lucius
ENSONIG00000012527	mrps18c	99	76.000	ENSFHEG00000015550	mrps18c	96	67.424	Fundulus_heteroclitus
ENSONIG00000012527	mrps18c	99	76.000	ENSFHEG00000018752	-	100	67.692	Fundulus_heteroclitus
ENSONIG00000012527	mrps18c	90	64.835	ENSGALG00000023191	MRPS18C	83	54.032	Gallus_gallus
ENSONIG00000012527	mrps18c	91	80.435	ENSGAFG00000008048	mrps18c	85	66.917	Gambusia_affinis
ENSONIG00000012527	mrps18c	95	63.542	ENSGAGG00000015144	-	75	58.491	Gopherus_agassizii
ENSONIG00000012527	mrps18c	95	96.154	ENSHBUG00000002008	mrps18c	100	96.154	Haplochromis_burtoni
ENSONIG00000012527	mrps18c	91	80.435	ENSHCOG00000013161	mrps18c	70	80.435	Hippocampus_comes
ENSONIG00000012527	mrps18c	90	76.923	ENSIPUG00000003783	mrps18c	88	76.923	Ictalurus_punctatus
ENSONIG00000012527	mrps18c	92	83.871	ENSKMAG00000016467	mrps18c	100	70.769	Kryptolebias_marmoratus
ENSONIG00000012527	mrps18c	92	83.871	ENSLBEG00000019174	mrps18c	100	73.077	Labrus_bergylta
ENSONIG00000012527	mrps18c	92	83.871	ENSLBEG00000021861	mrps18c	100	73.077	Labrus_bergylta
ENSONIG00000012527	mrps18c	94	65.263	ENSLACG00000011243	mrps18c	100	53.125	Latimeria_chalumnae
ENSONIG00000012527	mrps18c	96	67.010	ENSLOCG00000012115	mrps18c	72	67.010	Lepisosteus_oculatus
ENSONIG00000012527	mrps18c	91	83.696	ENSMAMG00000012386	mrps18c	100	70.896	Mastacembelus_armatus
ENSONIG00000012527	mrps18c	95	96.154	ENSMZEG00005023278	mrps18c	100	96.154	Maylandia_zebra
ENSONIG00000012527	mrps18c	91	88.043	ENSMMOG00000011316	mrps18c	71	87.097	Mola_mola
ENSONIG00000012527	mrps18c	95	96.154	ENSNBRG00000006182	mrps18c	100	96.154	Neolamprologus_brichardi
ENSONIG00000012527	mrps18c	88	69.663	ENSMEUG00000010972	-	70	69.663	Notamacropus_eugenii
ENSONIG00000012527	mrps18c	92	78.495	ENSORLG00015006869	mrps18c	100	65.385	Oryzias_latipes_hsok
ENSONIG00000012527	mrps18c	89	75.556	ENSOMEG00000005009	mrps18c	87	75.556	Oryzias_melastigma
ENSONIG00000012527	mrps18c	96	74.227	ENSPKIG00000021736	mrps18c	100	61.314	Paramormyrops_kingsleyae
ENSONIG00000012527	mrps18c	90	84.615	ENSPMGG00000002991	mrps18c	92	84.615	Periophthalmus_magnuspinnatus
ENSONIG00000012527	mrps18c	91	78.261	ENSPFOG00000002351	mrps18c	85	66.165	Poecilia_formosa
ENSONIG00000012527	mrps18c	91	78.261	ENSPLAG00000015187	mrps18c	100	66.923	Poecilia_latipinna
ENSONIG00000012527	mrps18c	91	78.261	ENSPMEG00000014488	mrps18c	85	65.414	Poecilia_mexicana
ENSONIG00000012527	mrps18c	82	81.928	ENSPREG00000012593	mrps18c	85	81.928	Poecilia_reticulata
ENSONIG00000012527	mrps18c	95	95.385	ENSPNYG00000010654	mrps18c	100	95.385	Pundamilia_nyererei
ENSONIG00000012527	mrps18c	96	74.227	ENSPNAG00000009350	mrps18c	87	76.344	Pygocentrus_nattereri
ENSONIG00000012527	mrps18c	97	73.469	ENSSFOG00015019444	mrps18c	93	61.538	Scleropages_formosus
ENSONIG00000012527	mrps18c	91	86.957	ENSSDUG00000015676	mrps18c	100	73.846	Seriola_dumerili
ENSONIG00000012527	mrps18c	91	86.957	ENSSLDG00000002034	mrps18c	71	86.957	Seriola_lalandi_dorsalis
ENSONIG00000012527	mrps18c	94	65.263	ENSSPUG00000013990	-	78	61.682	Sphenodon_punctatus
ENSONIG00000012527	mrps18c	90	79.121	ENSSPAG00000008687	mrps18c	99	68.992	Stegastes_partitus
ENSONIG00000012527	mrps18c	92	79.570	ENSTRUG00000024403	mrps18c	100	67.692	Takifugu_rubripes
ENSONIG00000012527	mrps18c	92	81.720	ENSTNIG00000005674	mrps18c	100	70.000	Tetraodon_nigroviridis
ENSONIG00000012527	mrps18c	83	72.619	ENSXETG00000027597	mrps18c	89	59.829	Xenopus_tropicalis
ENSONIG00000012527	mrps18c	93	79.787	ENSXCOG00000016208	mrps18c	89	83.146	Xiphophorus_couchianus
ENSONIG00000012527	mrps18c	91	80.435	ENSXMAG00000012555	mrps18c	85	66.917	Xiphophorus_maculatus