EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000012651 (Gene tree)
Gene ID: 100698250
Gene Symbol: ythdc1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 12710 bases
Position: chrGL831271.1:1392808-1405517
Accession: 100698250
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000015919	YTH	PF04146.15	7.1e-41	1	1
ENSONIP00000015920	YTH	PF04146.15	7.4e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000015934	-	4006	-	ENSONIP00000015919	681 (aa)	XP_005458404	I3K474
ENSONIT00000015935	-	2100	-	ENSONIP00000015920	700 (aa)	-	I3K475

Gene Model

Click here to download ENSONIG00000012651's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000012651's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000012651	ythdc1	59	66.819	ENSG00000083896	YTHDC1	92	52.408	Homo_sapiens
ENSONIG00000012651	ythdc1	90	100.000	ENSAPOG00000013997	ythdc1	93	100.000	Acanthochromis_polyacanthus
ENSONIG00000012651	ythdc1	65	69.176	ENSAMEG00000005688	YTHDC1	67	75.000	Ailuropoda_melanoleuca
ENSONIG00000012651	ythdc1	90	97.778	ENSACIG00000019728	ythdc1	93	97.727	Amphilophus_citrinellus
ENSONIG00000012651	ythdc1	90	100.000	ENSAOCG00000000239	ythdc1	94	100.000	Amphiprion_ocellaris
ENSONIG00000012651	ythdc1	82	100.000	ENSAPEG00000000618	ythdc1	90	100.000	Amphiprion_percula
ENSONIG00000012651	ythdc1	87	92.000	ENSATEG00000023007	ythdc1	92	100.000	Anabas_testudineus
ENSONIG00000012651	ythdc1	89	67.500	ENSAPLG00000009921	YTHDC1	92	76.471	Anas_platyrhynchos
ENSONIG00000012651	ythdc1	94	55.331	ENSACAG00000009697	YTHDC1	93	50.872	Anolis_carolinensis
ENSONIG00000012651	ythdc1	59	66.819	ENSANAG00000001522	YTHDC1	92	49.787	Aotus_nancymaae
ENSONIG00000012651	ythdc1	100	99.559	ENSACLG00000019371	ythdc1	100	99.559	Astatotilapia_calliptera
ENSONIG00000012651	ythdc1	91	72.000	ENSAMXG00000006978	ythdc1	92	79.545	Astyanax_mexicanus
ENSONIG00000012651	ythdc1	59	65.675	ENSBTAG00000015572	YTHDC1	57	59.862	Bos_taurus
ENSONIG00000012651	ythdc1	59	66.819	ENSCJAG00000009934	YTHDC1	57	60.092	Callithrix_jacchus
ENSONIG00000012651	ythdc1	65	69.176	ENSCAFG00000002821	YTHDC1	67	75.000	Canis_familiaris
ENSONIG00000012651	ythdc1	65	69.176	ENSCAFG00020027112	YTHDC1	68	75.000	Canis_lupus_dingo
ENSONIG00000012651	ythdc1	59	59.233	ENSCHIG00000004810	YTHDC1	54	54.676	Capra_hircus
ENSONIG00000012651	ythdc1	59	66.819	ENSTSYG00000011668	YTHDC1	92	52.691	Carlito_syrichta
ENSONIG00000012651	ythdc1	91	41.906	ENSCAPG00000008722	YTHDC1	72	88.462	Cavia_aperea
ENSONIG00000012651	ythdc1	58	61.882	ENSCPOG00000010929	YTHDC1	92	48.164	Cavia_porcellus
ENSONIG00000012651	ythdc1	59	66.819	ENSCCAG00000035754	YTHDC1	57	60.780	Cebus_capucinus
ENSONIG00000012651	ythdc1	59	66.746	ENSCATG00000036320	YTHDC1	93	53.996	Cercocebus_atys
ENSONIG00000012651	ythdc1	92	55.066	ENSCLAG00000005482	YTHDC1	92	49.415	Chinchilla_lanigera
ENSONIG00000012651	ythdc1	59	66.819	ENSCSAG00000005252	YTHDC1	57	60.092	Chlorocebus_sabaeus
ENSONIG00000012651	ythdc1	90	63.636	ENSCPBG00000021965	YTHDC1	89	71.053	Chrysemys_picta_bellii
ENSONIG00000012651	ythdc1	59	66.819	ENSCANG00000004769	YTHDC1	92	53.801	Colobus_angolensis_palliatus
ENSONIG00000012651	ythdc1	59	66.507	ENSCGRG00001000816	Ythdc1	93	52.263	Cricetulus_griseus_chok1gshd
ENSONIG00000012651	ythdc1	59	66.590	ENSCGRG00000009807	Ythdc1	92	51.923	Cricetulus_griseus_crigri
ENSONIG00000012651	ythdc1	90	93.333	ENSCSEG00000020404	ythdc1	94	93.182	Cynoglossus_semilaevis
ENSONIG00000012651	ythdc1	94	81.221	ENSCVAG00000022349	ythdc1	94	97.727	Cyprinodon_variegatus
ENSONIG00000012651	ythdc1	95	73.333	ENSDARG00000051953	ythdc1	92	75.000	Danio_rerio
ENSONIG00000012651	ythdc1	94	54.108	ENSDNOG00000004949	YTHDC1	66	75.000	Dasypus_novemcinctus
ENSONIG00000012651	ythdc1	64	69.412	ENSDORG00000013045	Ythdc1	66	76.471	Dipodomys_ordii
ENSONIG00000012651	ythdc1	79	65.385	ENSETEG00000001878	YTHDC1	51	82.000	Echinops_telfairi
ENSONIG00000012651	ythdc1	58	69.176	ENSEASG00005018383	YTHDC1	66	61.656	Equus_asinus_asinus
ENSONIG00000012651	ythdc1	92	69.697	ENSECAG00000018303	YTHDC1	78	66.848	Equus_caballus
ENSONIG00000012651	ythdc1	67	68.941	ENSEEUG00000015466	YTHDC1	66	75.000	Erinaceus_europaeus
ENSONIG00000012651	ythdc1	91	72.000	ENSELUG00000014029	ythdc1	92	79.545	Esox_lucius
ENSONIG00000012651	ythdc1	65	69.176	ENSFCAG00000026791	YTHDC1	67	75.000	Felis_catus
ENSONIG00000012651	ythdc1	76	63.319	ENSFALG00000006581	YTHDC1	86	74.419	Ficedula_albicollis
ENSONIG00000012651	ythdc1	58	69.176	ENSFDAG00000018560	YTHDC1	92	49.926	Fukomys_damarensis
ENSONIG00000012651	ythdc1	71	94.286	ENSFHEG00000001286	ythdc1	81	94.118	Fundulus_heteroclitus
ENSONIG00000012651	ythdc1	65	82.379	ENSGMOG00000018815	ythdc1	83	79.412	Gadus_morhua
ENSONIG00000012651	ythdc1	90	67.500	ENSGALG00000035906	YTHDC1	85	76.471	Gallus_gallus
ENSONIG00000012651	ythdc1	68	91.667	ENSGAFG00000001759	ythdc1	91	94.118	Gambusia_affinis
ENSONIG00000012651	ythdc1	90	93.333	ENSGACG00000015486	ythdc1	94	93.182	Gasterosteus_aculeatus
ENSONIG00000012651	ythdc1	93	58.485	ENSGAGG00000007108	YTHDC1	91	73.529	Gopherus_agassizii
ENSONIG00000012651	ythdc1	59	66.746	ENSGGOG00000021958	YTHDC1	93	53.891	Gorilla_gorilla
ENSONIG00000012651	ythdc1	100	99.706	ENSHBUG00000019288	ythdc1	99	99.706	Haplochromis_burtoni
ENSONIG00000012651	ythdc1	60	52.381	ENSHGLG00000003239	-	86	40.801	Heterocephalus_glaber_female
ENSONIG00000012651	ythdc1	94	56.598	ENSHGLG00000006319	-	92	49.855	Heterocephalus_glaber_female
ENSONIG00000012651	ythdc1	94	56.170	ENSHGLG00100001556	-	92	49.709	Heterocephalus_glaber_male
ENSONIG00000012651	ythdc1	60	50.000	ENSHGLG00100008060	-	86	39.003	Heterocephalus_glaber_male
ENSONIG00000012651	ythdc1	69	80.357	ENSHCOG00000001520	ythdc1	88	76.857	Hippocampus_comes
ENSONIG00000012651	ythdc1	95	75.556	ENSIPUG00000018136	ythdc1	92	77.273	Ictalurus_punctatus
ENSONIG00000012651	ythdc1	59	65.618	ENSSTOG00000013652	YTHDC1	93	49.433	Ictidomys_tridecemlineatus
ENSONIG00000012651	ythdc1	59	66.268	ENSJJAG00000010268	Ythdc1	58	63.048	Jaculus_jaculus
ENSONIG00000012651	ythdc1	60	91.971	ENSKMAG00000006483	ythdc1	87	93.494	Kryptolebias_marmoratus
ENSONIG00000012651	ythdc1	69	97.778	ENSLBEG00000020831	ythdc1	88	100.000	Labrus_bergylta
ENSONIG00000012651	ythdc1	58	66.434	ENSLACG00000004893	YTHDC1	65	62.391	Latimeria_chalumnae
ENSONIG00000012651	ythdc1	95	72.000	ENSLOCG00000003045	ythdc1	99	79.545	Lepisosteus_oculatus
ENSONIG00000012651	ythdc1	94	55.650	ENSLAFG00000021592	YTHDC1	99	54.064	Loxodonta_africana
ENSONIG00000012651	ythdc1	59	66.746	ENSMFAG00000031927	YTHDC1	92	53.801	Macaca_fascicularis
ENSONIG00000012651	ythdc1	59	66.819	ENSMMUG00000002265	YTHDC1	57	60.092	Macaca_mulatta
ENSONIG00000012651	ythdc1	59	66.819	ENSMNEG00000033751	YTHDC1	92	53.801	Macaca_nemestrina
ENSONIG00000012651	ythdc1	59	66.819	ENSMLEG00000042147	YTHDC1	92	53.801	Mandrillus_leucophaeus
ENSONIG00000012651	ythdc1	87	93.333	ENSMAMG00000013122	ythdc1	92	93.182	Mastacembelus_armatus
ENSONIG00000012651	ythdc1	100	99.559	ENSMZEG00005023173	ythdc1	99	99.559	Maylandia_zebra
ENSONIG00000012651	ythdc1	91	70.000	ENSMGAG00000010391	YTHDC1	92	77.273	Meleagris_gallopavo
ENSONIG00000012651	ythdc1	59	66.507	ENSMAUG00000001286	Ythdc1	93	52.117	Mesocricetus_auratus
ENSONIG00000012651	ythdc1	94	54.672	ENSMICG00000034640	YTHDC1	93	52.933	Microcebus_murinus
ENSONIG00000012651	ythdc1	59	66.507	ENSMOCG00000020201	Ythdc1	92	52.346	Microtus_ochrogaster
ENSONIG00000012651	ythdc1	73	95.556	ENSMMOG00000021200	ythdc1	93	95.455	Mola_mola
ENSONIG00000012651	ythdc1	50	49.143	ENSMODG00000004117	-	93	51.235	Monodelphis_domestica
ENSONIG00000012651	ythdc1	95	37.964	ENSMODG00000010076	-	56	48.000	Monodelphis_domestica
ENSONIG00000012651	ythdc1	94	56.975	ENSMODG00000020754	-	92	52.907	Monodelphis_domestica
ENSONIG00000012651	ythdc1	63	48.180	ENSMODG00000009173	-	87	47.156	Monodelphis_domestica
ENSONIG00000012651	ythdc1	97	41.308	ENSMODG00000014337	-	71	57.895	Monodelphis_domestica
ENSONIG00000012651	ythdc1	84	87.435	ENSMALG00000013412	ythdc1	93	88.636	Monopterus_albus
ENSONIG00000012651	ythdc1	59	66.590	MGP_CAROLIEiJ_G0027347	Ythdc1	93	52.788	Mus_caroli
ENSONIG00000012651	ythdc1	94	55.618	ENSMUSG00000035851	Ythdc1	93	53.089	Mus_musculus
ENSONIG00000012651	ythdc1	94	55.197	MGP_PahariEiJ_G0017126	Ythdc1	93	53.089	Mus_pahari
ENSONIG00000012651	ythdc1	94	54.775	MGP_SPRETEiJ_G0028339	Ythdc1	93	53.089	Mus_spretus
ENSONIG00000012651	ythdc1	75	67.273	ENSMPUG00000001743	YTHDC1	68	66.162	Mustela_putorius_furo
ENSONIG00000012651	ythdc1	59	66.362	ENSMLUG00000016300	YTHDC1	92	52.092	Myotis_lucifugus
ENSONIG00000012651	ythdc1	73	100.000	ENSNBRG00000007663	ythdc1	100	85.505	Neolamprologus_brichardi
ENSONIG00000012651	ythdc1	59	64.719	ENSNLEG00000009202	YTHDC1	92	53.425	Nomascus_leucogenys
ENSONIG00000012651	ythdc1	71	69.782	ENSOPRG00000008986	YTHDC1	54	63.522	Ochotona_princeps
ENSONIG00000012651	ythdc1	94	56.776	ENSODEG00000001715	YTHDC1	92	50.439	Octodon_degus
ENSONIG00000012651	ythdc1	88	50.514	ENSOANG00000014398	YTHDC1	50	69.589	Ornithorhynchus_anatinus
ENSONIG00000012651	ythdc1	89	75.556	ENSOCUG00000015886	YTHDC1	56	75.000	Oryctolagus_cuniculus
ENSONIG00000012651	ythdc1	89	94.444	ENSORLG00000030544	ythdc1	95	93.182	Oryzias_latipes
ENSONIG00000012651	ythdc1	90	93.333	ENSORLG00020019316	ythdc1	95	93.182	Oryzias_latipes_hni
ENSONIG00000012651	ythdc1	95	93.333	ENSOMEG00000000551	ythdc1	95	93.182	Oryzias_melastigma
ENSONIG00000012651	ythdc1	59	67.277	ENSOGAG00000003362	YTHDC1	92	52.833	Otolemur_garnettii
ENSONIG00000012651	ythdc1	59	65.675	ENSOARG00000008633	YTHDC1	57	59.862	Ovis_aries
ENSONIG00000012651	ythdc1	59	66.746	ENSPPAG00000041315	YTHDC1	93	54.492	Pan_paniscus
ENSONIG00000012651	ythdc1	65	68.000	ENSPPRG00000011979	YTHDC1	68	75.000	Panthera_pardus
ENSONIG00000012651	ythdc1	64	67.436	ENSPTIG00000015527	YTHDC1	67	73.529	Panthera_tigris_altaica
ENSONIG00000012651	ythdc1	59	66.746	ENSPTRG00000016105	YTHDC1	93	54.492	Pan_troglodytes
ENSONIG00000012651	ythdc1	59	66.746	ENSPANG00000021590	YTHDC1	92	53.891	Papio_anubis
ENSONIG00000012651	ythdc1	91	70.000	ENSPKIG00000018497	ythdc1	99	77.273	Paramormyrops_kingsleyae
ENSONIG00000012651	ythdc1	89	65.854	ENSPSIG00000002782	YTHDC1	92	74.286	Pelodiscus_sinensis
ENSONIG00000012651	ythdc1	57	73.874	ENSPMGG00000000970	-	80	75.000	Periophthalmus_magnuspinnatus
ENSONIG00000012651	ythdc1	59	66.590	ENSPEMG00000013850	Ythdc1	92	51.852	Peromyscus_maniculatus_bairdii
ENSONIG00000012651	ythdc1	91	70.000	ENSPCIG00000006870	YTHDC1	92	53.223	Phascolarctos_cinereus
ENSONIG00000012651	ythdc1	94	79.969	ENSPFOG00000013404	ythdc1	94	93.182	Poecilia_formosa
ENSONIG00000012651	ythdc1	60	87.500	ENSPLAG00000011079	ythdc1	87	87.835	Poecilia_latipinna
ENSONIG00000012651	ythdc1	94	80.282	ENSPMEG00000009238	ythdc1	94	95.455	Poecilia_mexicana
ENSONIG00000012651	ythdc1	94	68.429	ENSPREG00000016973	ythdc1	93	93.182	Poecilia_reticulata
ENSONIG00000012651	ythdc1	58	69.412	ENSPPYG00000014726	YTHDC1	78	57.312	Pongo_abelii
ENSONIG00000012651	ythdc1	77	59.167	ENSPCAG00000009607	YTHDC1	69	63.580	Procavia_capensis
ENSONIG00000012651	ythdc1	94	51.689	ENSPCOG00000019105	YTHDC1	92	50.369	Propithecus_coquereli
ENSONIG00000012651	ythdc1	59	63.387	ENSPVAG00000015551	YTHDC1	92	46.725	Pteropus_vampyrus
ENSONIG00000012651	ythdc1	100	99.559	ENSPNYG00000011687	ythdc1	100	99.559	Pundamilia_nyererei
ENSONIG00000012651	ythdc1	90	80.000	ENSPNAG00000028365	ythdc1	92	81.818	Pygocentrus_nattereri
ENSONIG00000012651	ythdc1	59	65.393	ENSRNOG00000001996	Ythdc1	93	51.883	Rattus_norvegicus
ENSONIG00000012651	ythdc1	63	69.697	ENSRBIG00000028279	YTHDC1	92	53.620	Rhinopithecus_bieti
ENSONIG00000012651	ythdc1	59	66.819	ENSRROG00000035028	YTHDC1	92	53.801	Rhinopithecus_roxellana
ENSONIG00000012651	ythdc1	59	66.746	ENSSBOG00000022353	YTHDC1	92	53.801	Saimiri_boliviensis_boliviensis
ENSONIG00000012651	ythdc1	94	56.241	ENSSHAG00000002538	YTHDC1	92	52.180	Sarcophilus_harrisii
ENSONIG00000012651	ythdc1	94	61.094	ENSSFOG00015003298	ythdc1	59	69.660	Scleropages_formosus
ENSONIG00000012651	ythdc1	94	83.981	ENSSMAG00000009086	ythdc1	94	93.182	Scophthalmus_maximus
ENSONIG00000012651	ythdc1	94	91.460	ENSSDUG00000022008	ythdc1	94	93.182	Seriola_dumerili
ENSONIG00000012651	ythdc1	94	91.460	ENSSLDG00000007926	ythdc1	94	93.182	Seriola_lalandi_dorsalis
ENSONIG00000012651	ythdc1	58	68.471	ENSSARG00000010960	YTHDC1	77	61.002	Sorex_araneus
ENSONIG00000012651	ythdc1	90	67.391	ENSSPUG00000009357	YTHDC1	92	52.924	Sphenodon_punctatus
ENSONIG00000012651	ythdc1	90	97.778	ENSSPAG00000011449	ythdc1	94	97.727	Stegastes_partitus
ENSONIG00000012651	ythdc1	58	67.898	ENSSSCG00000035505	YTHDC1	93	52.156	Sus_scrofa
ENSONIG00000012651	ythdc1	91	70.000	ENSTGUG00000004452	-	92	50.287	Taeniopygia_guttata
ENSONIG00000012651	ythdc1	95	70.788	ENSTRUG00000010142	ythdc1	85	85.000	Takifugu_rubripes
ENSONIG00000012651	ythdc1	93	91.111	ENSTNIG00000013243	ythdc1	92	90.909	Tetraodon_nigroviridis
ENSONIG00000012651	ythdc1	94	55.443	ENSTBEG00000011546	YTHDC1	69	65.909	Tupaia_belangeri
ENSONIG00000012651	ythdc1	58	68.000	ENSTTRG00000005083	YTHDC1	92	49.858	Tursiops_truncatus
ENSONIG00000012651	ythdc1	58	69.176	ENSUAMG00000010388	YTHDC1	66	61.656	Ursus_americanus
ENSONIG00000012651	ythdc1	90	63.415	ENSUMAG00000013668	YTHDC1	90	71.429	Ursus_maritimus
ENSONIG00000012651	ythdc1	94	53.991	ENSVPAG00000009040	YTHDC1	92	52.709	Vicugna_pacos
ENSONIG00000012651	ythdc1	64	67.898	ENSVVUG00000005387	YTHDC1	67	74.286	Vulpes_vulpes
ENSONIG00000012651	ythdc1	90	67.391	ENSXETG00000017960	ythdc1	92	50.890	Xenopus_tropicalis
ENSONIG00000012651	ythdc1	58	91.667	ENSXCOG00000000530	ythdc1	86	94.286	Xiphophorus_couchianus
ENSONIG00000012651	ythdc1	90	93.333	ENSXMAG00000005196	ythdc1	94	95.455	Xiphophorus_maculatus