EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000012671 (Gene tree)
Gene ID: -
Gene Symbol: prpf4
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 11384 bases
Position: chrGL831271.1:1505577-1516960
Accession: 100699324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000015947	PRP4	PF08799.11	1.9e-14	1	1
ENSONIP00000015948	PRP4	PF08799.11	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000015963	-	1575	-	ENSONIP00000015948	524 (aa)	-	I3K4A3
ENSONIT00000015962	-	1775	XM_003453580	ENSONIP00000015947	510 (aa)	XP_003453628	I3K4A2

Gene Model

Click here to download ENSONIG00000012671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000012671's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000012671	prpf4	56	34.091	ENSONIG00000002319	tbl3	72	34.091
ENSONIG00000012671	prpf4	56	31.875	ENSONIG00000014378	POC1A	63	31.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000012671	prpf4	99	76.984	ENSG00000136875	PRPF4	99	75.287	Homo_sapiens
ENSONIG00000012671	prpf4	99	94.410	ENSAPOG00000014132	prpf4	99	94.410	Acanthochromis_polyacanthus
ENSONIG00000012671	prpf4	99	76.984	ENSAMEG00000013048	PRPF4	94	76.984	Ailuropoda_melanoleuca
ENSONIG00000012671	prpf4	100	96.471	ENSACIG00000005579	prpf4	100	96.471	Amphilophus_citrinellus
ENSONIG00000012671	prpf4	100	94.510	ENSAOCG00000005457	prpf4	100	94.510	Amphiprion_ocellaris
ENSONIG00000012671	prpf4	100	94.314	ENSAPEG00000000776	prpf4	100	94.314	Amphiprion_percula
ENSONIG00000012671	prpf4	100	94.314	ENSATEG00000023013	prpf4	100	94.314	Anabas_testudineus
ENSONIG00000012671	prpf4	99	76.923	ENSAPLG00000006534	PRPF4	94	76.923	Anas_platyrhynchos
ENSONIG00000012671	prpf4	99	74.951	ENSACAG00000015110	PRPF4	98	74.951	Anolis_carolinensis
ENSONIG00000012671	prpf4	99	76.984	ENSANAG00000022464	PRPF4	96	75.287	Aotus_nancymaae
ENSONIG00000012671	prpf4	100	98.824	ENSACLG00000019031	prpf4	100	98.824	Astatotilapia_calliptera
ENSONIG00000012671	prpf4	100	61.027	ENSAMXG00000006756	prpf4	100	73.725	Astyanax_mexicanus
ENSONIG00000012671	prpf4	99	76.984	ENSBTAG00000004571	PRPF4	96	76.984	Bos_taurus
ENSONIG00000012671	prpf4	88	45.354	WBGene00007972	prp-4	91	45.354	Caenorhabditis_elegans
ENSONIG00000012671	prpf4	99	76.984	ENSCJAG00000017856	PRPF4	99	75.096	Callithrix_jacchus
ENSONIG00000012671	prpf4	99	76.984	ENSCAFG00000003224	PRPF4	93	76.984	Canis_familiaris
ENSONIG00000012671	prpf4	99	76.984	ENSCAFG00020022637	PRPF4	97	76.984	Canis_lupus_dingo
ENSONIG00000012671	prpf4	99	76.984	ENSCHIG00000024648	-	99	75.096	Capra_hircus
ENSONIG00000012671	prpf4	99	77.183	ENSTSYG00000010366	PRPF4	99	75.479	Carlito_syrichta
ENSONIG00000012671	prpf4	90	69.212	ENSCAPG00000008935	PRPF4	97	69.212	Cavia_aperea
ENSONIG00000012671	prpf4	99	76.587	ENSCPOG00000010747	-	99	74.904	Cavia_porcellus
ENSONIG00000012671	prpf4	99	71.627	ENSCPOG00000014729	-	96	71.627	Cavia_porcellus
ENSONIG00000012671	prpf4	99	76.786	ENSCCAG00000028990	PRPF4	99	75.096	Cebus_capucinus
ENSONIG00000012671	prpf4	99	76.984	ENSCATG00000021552	PRPF4	99	75.287	Cercocebus_atys
ENSONIG00000012671	prpf4	99	76.984	ENSCLAG00000013448	PRPF4	99	75.287	Chinchilla_lanigera
ENSONIG00000012671	prpf4	89	76.549	ENSCHOG00000007233	PRPF4	100	76.549	Choloepus_hoffmanni
ENSONIG00000012671	prpf4	99	76.134	ENSCPBG00000019136	PRPF4	73	76.134	Chrysemys_picta_bellii
ENSONIG00000012671	prpf4	100	58.509	ENSCING00000001299	-	100	58.509	Ciona_intestinalis
ENSONIG00000012671	prpf4	98	58.218	ENSCSAVG00000009178	-	99	60.000	Ciona_savignyi
ENSONIG00000012671	prpf4	99	76.984	ENSCANG00000003246	PRPF4	99	75.287	Colobus_angolensis_palliatus
ENSONIG00000012671	prpf4	99	76.786	ENSCGRG00001016992	Prpf4	99	75.096	Cricetulus_griseus_chok1gshd
ENSONIG00000012671	prpf4	99	76.786	ENSCGRG00000017560	Prpf4	99	75.096	Cricetulus_griseus_crigri
ENSONIG00000012671	prpf4	100	87.451	ENSCSEG00000020451	prpf4	100	87.451	Cynoglossus_semilaevis
ENSONIG00000012671	prpf4	100	80.196	ENSDARG00000067639	prpf4	100	80.196	Danio_rerio
ENSONIG00000012671	prpf4	99	76.786	ENSDNOG00000013203	PRPF4	99	74.904	Dasypus_novemcinctus
ENSONIG00000012671	prpf4	99	77.381	ENSDORG00000026275	Prpf4	99	75.670	Dipodomys_ordii
ENSONIG00000012671	prpf4	99	50.454	FBgn0036733	U4-U6-60K	99	50.454	Drosophila_melanogaster
ENSONIG00000012671	prpf4	99	77.579	ENSETEG00000020389	PRPF4	96	77.579	Echinops_telfairi
ENSONIG00000012671	prpf4	99	68.090	ENSEBUG00000015229	prpf4	88	68.764	Eptatretus_burgeri
ENSONIG00000012671	prpf4	99	76.984	ENSEASG00005022678	PRPF4	99	75.287	Equus_asinus_asinus
ENSONIG00000012671	prpf4	99	76.984	ENSECAG00000007072	PRPF4	99	75.287	Equus_caballus
ENSONIG00000012671	prpf4	85	80.753	ENSEEUG00000007480	PRPF4	99	59.389	Erinaceus_europaeus
ENSONIG00000012671	prpf4	100	80.980	ENSELUG00000007510	prpf4	100	80.980	Esox_lucius
ENSONIG00000012671	prpf4	99	76.984	ENSFCAG00000005514	PRPF4	99	75.096	Felis_catus
ENSONIG00000012671	prpf4	99	76.072	ENSFALG00000005423	PRPF4	85	76.072	Ficedula_albicollis
ENSONIG00000012671	prpf4	99	76.984	ENSFDAG00000005839	PRPF4	99	75.287	Fukomys_damarensis
ENSONIG00000012671	prpf4	100	92.549	ENSFHEG00000001300	prpf4	100	92.549	Fundulus_heteroclitus
ENSONIG00000012671	prpf4	99	76.726	ENSGALG00000008857	PRPF4	94	76.726	Gallus_gallus
ENSONIG00000012671	prpf4	85	90.578	ENSGAFG00000012164	prpf4	68	90.578	Gambusia_affinis
ENSONIG00000012671	prpf4	100	81.250	ENSGACG00000015476	prpf4	100	81.055	Gasterosteus_aculeatus
ENSONIG00000012671	prpf4	99	75.740	ENSGAGG00000025029	PRPF4	94	75.740	Gopherus_agassizii
ENSONIG00000012671	prpf4	99	76.984	ENSGGOG00000006943	PRPF4	99	75.287	Gorilla_gorilla
ENSONIG00000012671	prpf4	100	98.824	ENSHBUG00000000562	prpf4	100	98.965	Haplochromis_burtoni
ENSONIG00000012671	prpf4	95	66.258	ENSHGLG00000016628	-	95	66.667	Heterocephalus_glaber_female
ENSONIG00000012671	prpf4	99	77.183	ENSHGLG00000015191	PRPF4	99	75.479	Heterocephalus_glaber_female
ENSONIG00000012671	prpf4	99	62.500	ENSHGLG00000003838	-	99	61.185	Heterocephalus_glaber_female
ENSONIG00000012671	prpf4	99	62.500	ENSHGLG00100005571	-	99	61.185	Heterocephalus_glaber_male
ENSONIG00000012671	prpf4	100	78.627	ENSIPUG00000017956	PRPF4	100	78.627	Ictalurus_punctatus
ENSONIG00000012671	prpf4	99	76.984	ENSSTOG00000027833	PRPF4	96	76.984	Ictidomys_tridecemlineatus
ENSONIG00000012671	prpf4	99	76.984	ENSJJAG00000008838	Prpf4	99	75.287	Jaculus_jaculus
ENSONIG00000012671	prpf4	100	91.961	ENSKMAG00000013236	prpf4	100	91.961	Kryptolebias_marmoratus
ENSONIG00000012671	prpf4	100	93.529	ENSLBEG00000020611	prpf4	100	93.529	Labrus_bergylta
ENSONIG00000012671	prpf4	100	72.266	ENSLACG00000016317	PRPF4	98	72.125	Latimeria_chalumnae
ENSONIG00000012671	prpf4	100	81.373	ENSLOCG00000000581	prpf4	100	81.373	Lepisosteus_oculatus
ENSONIG00000012671	prpf4	99	76.984	ENSLAFG00000018225	PRPF4	96	76.984	Loxodonta_africana
ENSONIG00000012671	prpf4	99	76.786	ENSMFAG00000039397	PRPF4	99	74.952	Macaca_fascicularis
ENSONIG00000012671	prpf4	99	76.984	ENSMMUG00000005844	PRPF4	99	75.287	Macaca_mulatta
ENSONIG00000012671	prpf4	99	68.254	ENSMNEG00000033737	PRPF4	99	66.730	Macaca_nemestrina
ENSONIG00000012671	prpf4	99	76.984	ENSMLEG00000040284	PRPF4	99	75.287	Mandrillus_leucophaeus
ENSONIG00000012671	prpf4	100	94.314	ENSMAMG00000020141	prpf4	100	94.314	Mastacembelus_armatus
ENSONIG00000012671	prpf4	100	98.824	ENSMZEG00005023205	prpf4	100	98.824	Maylandia_zebra
ENSONIG00000012671	prpf4	99	76.134	ENSMGAG00000001796	PRPF4	94	76.134	Meleagris_gallopavo
ENSONIG00000012671	prpf4	99	76.786	ENSMAUG00000018022	Prpf4	99	75.096	Mesocricetus_auratus
ENSONIG00000012671	prpf4	99	76.424	ENSMICG00000015022	PRPF4	99	75.287	Microcebus_murinus
ENSONIG00000012671	prpf4	99	76.786	ENSMOCG00000018273	Prpf4	99	75.096	Microtus_ochrogaster
ENSONIG00000012671	prpf4	100	90.784	ENSMMOG00000021177	prpf4	100	90.784	Mola_mola
ENSONIG00000012671	prpf4	99	75.937	ENSMODG00000004444	-	98	75.097	Monodelphis_domestica
ENSONIG00000012671	prpf4	99	75.345	ENSMODG00000025096	-	94	75.345	Monodelphis_domestica
ENSONIG00000012671	prpf4	100	94.314	ENSMALG00000013624	prpf4	100	94.314	Monopterus_albus
ENSONIG00000012671	prpf4	99	76.786	MGP_CAROLIEiJ_G0026078	Prpf4	99	75.096	Mus_caroli
ENSONIG00000012671	prpf4	99	76.786	ENSMUSG00000066148	Prpf4	99	75.096	Mus_musculus
ENSONIG00000012671	prpf4	99	76.984	MGP_PahariEiJ_G0028413	Prpf4	99	75.287	Mus_pahari
ENSONIG00000012671	prpf4	99	76.786	MGP_SPRETEiJ_G0027042	Prpf4	99	75.096	Mus_spretus
ENSONIG00000012671	prpf4	99	76.984	ENSMPUG00000007883	PRPF4	96	76.984	Mustela_putorius_furo
ENSONIG00000012671	prpf4	99	75.794	ENSMLUG00000008626	-	94	75.794	Myotis_lucifugus
ENSONIG00000012671	prpf4	99	76.786	ENSMLUG00000015309	-	93	76.786	Myotis_lucifugus
ENSONIG00000012671	prpf4	99	71.825	ENSNGAG00000000468	Prpf4	96	71.825	Nannospalax_galili
ENSONIG00000012671	prpf4	100	98.824	ENSNBRG00000007972	prpf4	100	98.824	Neolamprologus_brichardi
ENSONIG00000012671	prpf4	99	76.984	ENSNLEG00000016647	PRPF4	99	75.287	Nomascus_leucogenys
ENSONIG00000012671	prpf4	99	75.542	ENSMEUG00000013256	PRPF4	99	74.708	Notamacropus_eugenii
ENSONIG00000012671	prpf4	99	77.183	ENSOPRG00000005302	PRPF4	99	75.287	Ochotona_princeps
ENSONIG00000012671	prpf4	99	76.984	ENSODEG00000018147	PRPF4	99	75.287	Octodon_degus
ENSONIG00000012671	prpf4	99	77.183	ENSOCUG00000005046	PRPF4	99	75.479	Oryctolagus_cuniculus
ENSONIG00000012671	prpf4	100	90.980	ENSORLG00000019641	prpf4	100	90.980	Oryzias_latipes
ENSONIG00000012671	prpf4	100	90.980	ENSORLG00020019438	prpf4	100	90.980	Oryzias_latipes_hni
ENSONIG00000012671	prpf4	100	90.000	ENSOMEG00000020941	prpf4	100	90.890	Oryzias_melastigma
ENSONIG00000012671	prpf4	99	72.817	ENSOGAG00000007802	PRPF4	94	72.817	Otolemur_garnettii
ENSONIG00000012671	prpf4	99	76.984	ENSOARG00000006319	PRPF4	96	75.143	Ovis_aries
ENSONIG00000012671	prpf4	99	76.984	ENSPPAG00000041797	PRPF4	99	75.287	Pan_paniscus
ENSONIG00000012671	prpf4	99	76.984	ENSPPRG00000014360	PRPF4	99	75.287	Panthera_pardus
ENSONIG00000012671	prpf4	99	76.984	ENSPTIG00000009574	PRPF4	99	75.287	Panthera_tigris_altaica
ENSONIG00000012671	prpf4	99	76.984	ENSPTRG00000021274	PRPF4	99	75.096	Pan_troglodytes
ENSONIG00000012671	prpf4	99	77.183	ENSPANG00000025776	PRPF4	96	75.479	Papio_anubis
ENSONIG00000012671	prpf4	100	80.980	ENSPKIG00000017259	prpf4	100	80.980	Paramormyrops_kingsleyae
ENSONIG00000012671	prpf4	100	76.078	ENSPSIG00000010713	PRPF4	89	76.331	Pelodiscus_sinensis
ENSONIG00000012671	prpf4	100	65.985	ENSPMGG00000000997	prpf4	98	67.286	Periophthalmus_magnuspinnatus
ENSONIG00000012671	prpf4	99	76.786	ENSPEMG00000024115	Prpf4	99	75.096	Peromyscus_maniculatus_bairdii
ENSONIG00000012671	prpf4	99	75.740	ENSPCIG00000003821	PRPF4	99	74.903	Phascolarctos_cinereus
ENSONIG00000012671	prpf4	100	85.798	ENSPFOG00000013524	prpf4	99	90.274	Poecilia_formosa
ENSONIG00000012671	prpf4	84	89.130	ENSPLAG00000011620	prpf4	96	89.130	Poecilia_latipinna
ENSONIG00000012671	prpf4	98	90.560	ENSPMEG00000006813	prpf4	100	90.560	Poecilia_mexicana
ENSONIG00000012671	prpf4	99	76.786	ENSPCAG00000002561	PRPF4	98	76.786	Procavia_capensis
ENSONIG00000012671	prpf4	99	76.786	ENSPCOG00000011975	PRPF4	99	75.096	Propithecus_coquereli
ENSONIG00000012671	prpf4	99	73.810	ENSPVAG00000004708	PRPF4	99	71.648	Pteropus_vampyrus
ENSONIG00000012671	prpf4	100	99.020	ENSPNYG00000008013	prpf4	100	99.020	Pundamilia_nyererei
ENSONIG00000012671	prpf4	100	80.196	ENSPNAG00000000697	prpf4	100	80.196	Pygocentrus_nattereri
ENSONIG00000012671	prpf4	99	76.786	ENSRNOG00000014777	Prpf4	99	75.096	Rattus_norvegicus
ENSONIG00000012671	prpf4	99	76.984	ENSRBIG00000040221	PRPF4	99	75.287	Rhinopithecus_bieti
ENSONIG00000012671	prpf4	99	76.984	ENSRROG00000040240	PRPF4	99	75.287	Rhinopithecus_roxellana
ENSONIG00000012671	prpf4	99	75.740	ENSSHAG00000017658	PRPF4	98	74.903	Sarcophilus_harrisii
ENSONIG00000012671	prpf4	100	81.765	ENSSFOG00015008963	prpf4	100	81.765	Scleropages_formosus
ENSONIG00000012671	prpf4	100	91.961	ENSSMAG00000008889	prpf4	100	91.961	Scophthalmus_maximus
ENSONIG00000012671	prpf4	99	95.031	ENSSDUG00000022083	prpf4	94	95.031	Seriola_dumerili
ENSONIG00000012671	prpf4	99	94.824	ENSSLDG00000008115	prpf4	94	94.824	Seriola_lalandi_dorsalis
ENSONIG00000012671	prpf4	99	76.228	ENSSPUG00000015582	PRPF4	97	76.228	Sphenodon_punctatus
ENSONIG00000012671	prpf4	100	87.329	ENSSPAG00000011286	prpf4	100	87.329	Stegastes_partitus
ENSONIG00000012671	prpf4	99	76.984	ENSSSCG00000024648	PRPF4	99	75.287	Sus_scrofa
ENSONIG00000012671	prpf4	97	77.778	ENSTGUG00000002623	PRPF4	100	78.004	Taeniopygia_guttata
ENSONIG00000012671	prpf4	100	87.843	ENSTRUG00000008853	prpf4	100	87.843	Takifugu_rubripes
ENSONIG00000012671	prpf4	100	88.845	ENSTNIG00000013250	prpf4	100	88.845	Tetraodon_nigroviridis
ENSONIG00000012671	prpf4	99	69.841	ENSTBEG00000000821	PRPF4	99	68.199	Tupaia_belangeri
ENSONIG00000012671	prpf4	89	78.859	ENSTTRG00000003246	PRPF4	85	78.859	Tursiops_truncatus
ENSONIG00000012671	prpf4	62	73.186	ENSUAMG00000018288	PRPF4	88	73.786	Ursus_americanus
ENSONIG00000012671	prpf4	99	76.389	ENSUMAG00000019375	PRPF4	96	76.389	Ursus_maritimus
ENSONIG00000012671	prpf4	99	76.587	ENSVPAG00000005281	PRPF4	99	74.713	Vicugna_pacos
ENSONIG00000012671	prpf4	99	76.181	ENSVVUG00000002476	PRPF4	99	75.984	Vulpes_vulpes
ENSONIG00000012671	prpf4	70	66.209	ENSXCOG00000006101	prpf4	93	68.949	Xiphophorus_couchianus
ENSONIG00000012671	prpf4	91	78.065	ENSXMAG00000002750	prpf4	100	79.216	Xiphophorus_maculatus