EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000012675 (Gene tree)
Gene ID: 109194149
Gene Symbol: r3hdm4
Alias: -
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 4304 bases
Position: chrGL831204.1:2630703-2635006
Accession: ZDB-GENE-070112-1352
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000015954	R3H	PF01424.22	5.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000015969	-	834	-	ENSONIP00000015954	277 (aa)	-	I3K4A9

Gene Model

Click here to download ENSONIG00000012675's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000012675's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000012675	r3hdm4	84	56.904	ENSG00000198858	R3HDM4	90	56.444	Homo_sapiens
ENSONIG00000012675	r3hdm4	84	57.741	ENSAMEG00000003001	R3HDM4	97	57.563	Ailuropoda_melanoleuca
ENSONIG00000012675	r3hdm4	92	93.750	ENSACIG00000004672	r3hdm4	100	93.750	Amphilophus_citrinellus
ENSONIG00000012675	r3hdm4	91	88.492	ENSATEG00000015913	r3hdm4	99	88.492	Anabas_testudineus
ENSONIG00000012675	r3hdm4	84	57.741	ENSANAG00000029748	R3HDM4	98	56.485	Aotus_nancymaae
ENSONIG00000012675	r3hdm4	84	57.322	ENSBTAG00000046406	R3HDM4	100	52.555	Bos_taurus
ENSONIG00000012675	r3hdm4	86	56.225	ENSCJAG00000020114	R3HDM4	92	55.020	Callithrix_jacchus
ENSONIG00000012675	r3hdm4	84	57.741	ENSCAFG00000019665	R3HDM4	87	56.485	Canis_familiaris
ENSONIG00000012675	r3hdm4	84	58.159	ENSCAFG00020016880	R3HDM4	87	56.904	Canis_lupus_dingo
ENSONIG00000012675	r3hdm4	92	54.015	ENSCHIG00000020110	R3HDM4	100	52.920	Capra_hircus
ENSONIG00000012675	r3hdm4	84	57.322	ENSCCAG00000019955	R3HDM4	86	56.485	Cebus_capucinus
ENSONIG00000012675	r3hdm4	84	56.846	ENSCATG00000037269	R3HDM4	89	55.000	Cercocebus_atys
ENSONIG00000012675	r3hdm4	84	55.882	ENSCLAG00000007094	R3HDM4	97	54.622	Chinchilla_lanigera
ENSONIG00000012675	r3hdm4	84	57.563	ENSCSAG00000012574	R3HDM4	88	57.563	Chlorocebus_sabaeus
ENSONIG00000012675	r3hdm4	92	62.782	ENSCPBG00000009805	R3HDM4	100	62.406	Chrysemys_picta_bellii
ENSONIG00000012675	r3hdm4	84	57.143	ENSCANG00000040439	R3HDM4	83	57.143	Colobus_angolensis_palliatus
ENSONIG00000012675	r3hdm4	84	56.118	ENSCGRG00001021650	R3hdm4	89	56.118	Cricetulus_griseus_chok1gshd
ENSONIG00000012675	r3hdm4	84	56.118	ENSCGRG00000013169	R3hdm4	89	56.118	Cricetulus_griseus_crigri
ENSONIG00000012675	r3hdm4	92	78.906	ENSCSEG00000018211	r3hdm4	100	78.906	Cynoglossus_semilaevis
ENSONIG00000012675	r3hdm4	92	87.891	ENSCVAG00000017127	r3hdm4	100	87.891	Cyprinodon_variegatus
ENSONIG00000012675	r3hdm4	83	56.485	ENSDORG00000006605	R3hdm4	96	56.485	Dipodomys_ordii
ENSONIG00000012675	r3hdm4	84	56.485	ENSEASG00005021556	R3HDM4	86	55.230	Equus_asinus_asinus
ENSONIG00000012675	r3hdm4	84	56.485	ENSECAG00000000003	R3HDM4	87	55.230	Equus_caballus
ENSONIG00000012675	r3hdm4	84	57.322	ENSFCAG00000042437	R3HDM4	88	56.067	Felis_catus
ENSONIG00000012675	r3hdm4	84	64.831	ENSFALG00000013938	R3HDM4	97	63.830	Ficedula_albicollis
ENSONIG00000012675	r3hdm4	84	56.303	ENSFDAG00000017040	R3HDM4	97	56.303	Fukomys_damarensis
ENSONIG00000012675	r3hdm4	92	87.109	ENSFHEG00000017636	r3hdm4	100	87.109	Fundulus_heteroclitus
ENSONIG00000012675	r3hdm4	87	71.074	ENSGMOG00000001231	r3hdm4	100	71.488	Gadus_morhua
ENSONIG00000012675	r3hdm4	84	63.025	ENSGALG00000001998	R3HDM4	90	62.605	Gallus_gallus
ENSONIG00000012675	r3hdm4	92	86.328	ENSGAFG00000004173	r3hdm4	100	86.328	Gambusia_affinis
ENSONIG00000012675	r3hdm4	92	62.406	ENSGAGG00000019698	R3HDM4	100	62.030	Gopherus_agassizii
ENSONIG00000012675	r3hdm4	84	56.904	ENSGGOG00000008040	R3HDM4	97	55.649	Gorilla_gorilla
ENSONIG00000012675	r3hdm4	92	99.219	ENSHBUG00000014810	r3hdm4	100	99.219	Haplochromis_burtoni
ENSONIG00000012675	r3hdm4	84	54.852	ENSHGLG00000016194	R3HDM4	88	54.202	Heterocephalus_glaber_female
ENSONIG00000012675	r3hdm4	92	83.922	ENSHCOG00000008422	r3hdm4	99	83.922	Hippocampus_comes
ENSONIG00000012675	r3hdm4	92	69.767	ENSIPUG00000006716	r3hdm4	100	69.767	Ictalurus_punctatus
ENSONIG00000012675	r3hdm4	84	54.622	ENSSTOG00000023015	R3HDM4	97	53.556	Ictidomys_tridecemlineatus
ENSONIG00000012675	r3hdm4	83	56.410	ENSJJAG00000012475	R3hdm4	89	54.852	Jaculus_jaculus
ENSONIG00000012675	r3hdm4	92	87.500	ENSKMAG00000005853	r3hdm4	100	87.500	Kryptolebias_marmoratus
ENSONIG00000012675	r3hdm4	92	88.281	ENSLBEG00000000730	r3hdm4	100	88.281	Labrus_bergylta
ENSONIG00000012675	r3hdm4	92	60.305	ENSLACG00000016445	R3HDM4	100	60.305	Latimeria_chalumnae
ENSONIG00000012675	r3hdm4	92	69.084	ENSLOCG00000002423	r3hdm4	100	69.732	Lepisosteus_oculatus
ENSONIG00000012675	r3hdm4	84	56.962	ENSLAFG00000017796	R3HDM4	91	55.696	Loxodonta_africana
ENSONIG00000012675	r3hdm4	84	57.563	ENSMFAG00000044131	R3HDM4	88	57.563	Macaca_fascicularis
ENSONIG00000012675	r3hdm4	79	58.482	ENSMMUG00000009682	R3HDM4	90	58.482	Macaca_mulatta
ENSONIG00000012675	r3hdm4	84	57.563	ENSMNEG00000044115	R3HDM4	96	57.563	Macaca_nemestrina
ENSONIG00000012675	r3hdm4	85	56.557	ENSMLEG00000035693	R3HDM4	89	54.733	Mandrillus_leucophaeus
ENSONIG00000012675	r3hdm4	81	88.789	ENSMAMG00000005652	r3hdm4	91	88.789	Mastacembelus_armatus
ENSONIG00000012675	r3hdm4	84	55.696	ENSMAUG00000010611	R3hdm4	90	56.410	Mesocricetus_auratus
ENSONIG00000012675	r3hdm4	84	56.485	ENSMICG00000010124	R3HDM4	88	55.230	Microcebus_murinus
ENSONIG00000012675	r3hdm4	84	55.745	ENSMOCG00000002646	R3hdm4	89	55.319	Microtus_ochrogaster
ENSONIG00000012675	r3hdm4	92	85.156	ENSMMOG00000008253	r3hdm4	100	85.156	Mola_mola
ENSONIG00000012675	r3hdm4	82	60.173	ENSMODG00000005698	R3HDM4	99	60.000	Monodelphis_domestica
ENSONIG00000012675	r3hdm4	92	86.719	ENSMALG00000018856	r3hdm4	100	86.719	Monopterus_albus
ENSONIG00000012675	r3hdm4	84	54.894	MGP_CAROLIEiJ_G0015551	R3hdm4	89	54.468	Mus_caroli
ENSONIG00000012675	r3hdm4	83	56.034	ENSMUSG00000035781	R3hdm4	89	55.172	Mus_musculus
ENSONIG00000012675	r3hdm4	84	54.894	MGP_PahariEiJ_G0030964	R3hdm4	89	54.468	Mus_pahari
ENSONIG00000012675	r3hdm4	84	56.170	MGP_SPRETEiJ_G0016369	-	75	55.319	Mus_spretus
ENSONIG00000012675	r3hdm4	84	59.414	ENSMPUG00000009394	R3HDM4	88	59.244	Mustela_putorius_furo
ENSONIG00000012675	r3hdm4	92	98.438	ENSNBRG00000004438	r3hdm4	100	98.438	Neolamprologus_brichardi
ENSONIG00000012675	r3hdm4	80	53.247	ENSNLEG00000001022	R3HDM4	99	51.948	Nomascus_leucogenys
ENSONIG00000012675	r3hdm4	84	59.322	ENSMEUG00000011020	R3HDM4	99	59.322	Notamacropus_eugenii
ENSONIG00000012675	r3hdm4	84	56.303	ENSODEG00000011745	R3HDM4	88	55.042	Octodon_degus
ENSONIG00000012675	r3hdm4	92	85.156	ENSOMEG00000003005	r3hdm4	100	85.156	Oryzias_melastigma
ENSONIG00000012675	r3hdm4	84	56.356	ENSOGAG00000025656	R3HDM4	89	56.356	Otolemur_garnettii
ENSONIG00000012675	r3hdm4	84	56.904	ENSOARG00000009945	R3HDM4	97	55.649	Ovis_aries
ENSONIG00000012675	r3hdm4	84	56.904	ENSPPAG00000042371	R3HDM4	97	55.649	Pan_paniscus
ENSONIG00000012675	r3hdm4	84	57.563	ENSPANG00000015203	R3HDM4	88	57.563	Papio_anubis
ENSONIG00000012675	r3hdm4	92	67.557	ENSPKIG00000007421	r3hdm4	100	68.702	Paramormyrops_kingsleyae
ENSONIG00000012675	r3hdm4	92	75.486	ENSPMGG00000020467	r3hdm4	100	75.486	Periophthalmus_magnuspinnatus
ENSONIG00000012675	r3hdm4	84	57.021	ENSPEMG00000008365	Tmem259	97	56.170	Peromyscus_maniculatus_bairdii
ENSONIG00000012675	r3hdm4	92	84.766	ENSPFOG00000003199	r3hdm4	100	84.766	Poecilia_formosa
ENSONIG00000012675	r3hdm4	92	84.375	ENSPMEG00000014183	r3hdm4	100	84.375	Poecilia_mexicana
ENSONIG00000012675	r3hdm4	92	85.547	ENSPREG00000010709	r3hdm4	100	85.547	Poecilia_reticulata
ENSONIG00000012675	r3hdm4	84	56.962	ENSPPYG00000009297	R3HDM4	88	55.696	Pongo_abelii
ENSONIG00000012675	r3hdm4	53	58.278	ENSPCAG00000010997	R3HDM4	55	56.291	Procavia_capensis
ENSONIG00000012675	r3hdm4	84	57.741	ENSPCOG00000016785	R3HDM4	88	56.485	Propithecus_coquereli
ENSONIG00000012675	r3hdm4	92	99.219	ENSPNYG00000017489	r3hdm4	100	99.219	Pundamilia_nyererei
ENSONIG00000012675	r3hdm4	84	55.319	ENSRNOG00000011489	R3hdm4	89	54.894	Rattus_norvegicus
ENSONIG00000012675	r3hdm4	84	57.563	ENSRROG00000028842	R3HDM4	88	57.563	Rhinopithecus_roxellana
ENSONIG00000012675	r3hdm4	84	56.198	ENSSBOG00000019298	R3HDM4	70	55.372	Saimiri_boliviensis_boliviensis
ENSONIG00000012675	r3hdm4	52	63.265	ENSSHAG00000003036	-	79	66.087	Sarcophilus_harrisii
ENSONIG00000012675	r3hdm4	90	74.597	ENSSFOG00015020574	r3hdm4	92	74.104	Scleropages_formosus
ENSONIG00000012675	r3hdm4	99	84.173	ENSSMAG00000021090	r3hdm4	81	84.173	Scophthalmus_maximus
ENSONIG00000012675	r3hdm4	92	92.578	ENSSDUG00000008488	r3hdm4	100	92.578	Seriola_dumerili
ENSONIG00000012675	r3hdm4	92	92.188	ENSSLDG00000025328	r3hdm4	100	92.188	Seriola_lalandi_dorsalis
ENSONIG00000012675	r3hdm4	84	62.869	ENSSPUG00000005434	R3HDM4	92	62.869	Sphenodon_punctatus
ENSONIG00000012675	r3hdm4	92	83.203	ENSSPAG00000002562	r3hdm4	99	83.203	Stegastes_partitus
ENSONIG00000012675	r3hdm4	84	57.322	ENSSSCG00000013419	R3HDM4	87	56.067	Sus_scrofa
ENSONIG00000012675	r3hdm4	72	55.340	ENSTGUG00000000663	R3HDM4	98	55.610	Taeniopygia_guttata
ENSONIG00000012675	r3hdm4	84	58.051	ENSTTRG00000001470	R3HDM4	97	56.780	Tursiops_truncatus
ENSONIG00000012675	r3hdm4	79	58.667	ENSUAMG00000005751	R3HDM4	100	58.482	Ursus_americanus
ENSONIG00000012675	r3hdm4	84	57.741	ENSVVUG00000022685	R3HDM4	87	56.485	Vulpes_vulpes
ENSONIG00000012675	r3hdm4	90	46.693	ENSXETG00000033624	R3HDM4	97	46.988	Xenopus_tropicalis
ENSONIG00000012675	r3hdm4	92	84.436	ENSXCOG00000005127	r3hdm4	100	84.436	Xiphophorus_couchianus
ENSONIG00000012675	r3hdm4	92	84.766	ENSXMAG00000022875	r3hdm4	100	84.766	Xiphophorus_maculatus