EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000012732 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 54550 bases
Position: chrGL831331.1:74955-129504
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000016022	cwf21	PF08312.12	1.1e-15	1	1
ENSONIP00000016023	cwf21	PF08312.12	1.2e-15	1	1
ENSONIP00000016022	SRRM_C	PF15230.6	6.5e-23	1	1
ENSONIP00000016023	SRRM_C	PF15230.6	5.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000016037	-	1743	-	ENSONIP00000016022	581 (aa)	-	I3K4H7
ENSONIT00000016038	-	1752	-	ENSONIP00000016023	584 (aa)	-	I3K4H8

Gene Model

Click here to download ENSONIG00000012732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000012732's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000012732	-	98	63.036	ENSAPOG00000000288	SRRM3	88	63.158	Acanthochromis_polyacanthus
ENSONIG00000012732	-	97	67.608	ENSACLG00000005269	SRRM3	88	69.012	Astatotilapia_calliptera
ENSONIG00000012732	-	99	45.349	ENSAMXG00000016051	-	53	52.023	Astyanax_mexicanus
ENSONIG00000012732	-	51	54.392	ENSCAFG00000013537	SRRM3	89	41.667	Canis_familiaris
ENSONIG00000012732	-	53	51.456	ENSCPBG00000027784	SRRM3	89	41.098	Chrysemys_picta_bellii
ENSONIG00000012732	-	50	55.290	ENSCGRG00001011385	Srrm3	90	43.384	Cricetulus_griseus_chok1gshd
ENSONIG00000012732	-	97	56.814	ENSCSEG00000010978	-	78	60.111	Cynoglossus_semilaevis
ENSONIG00000012732	-	51	57.095	ENSEASG00005016840	-	76	57.095	Equus_asinus_asinus
ENSONIG00000012732	-	51	57.095	ENSECAG00000022142	-	85	53.799	Equus_caballus
ENSONIG00000012732	-	51	55.405	ENSFCAG00000044112	SRRM3	90	43.760	Felis_catus
ENSONIG00000012732	-	51	52.649	ENSGALG00000001932	SRRM3	65	52.203	Gallus_gallus
ENSONIG00000012732	-	57	64.045	ENSGAFG00000014777	SRRM3	88	59.113	Gambusia_affinis
ENSONIG00000012732	-	99	42.809	ENSGAGG00000021058	SRRM3	96	39.866	Gopherus_agassizii
ENSONIG00000012732	-	97	67.662	ENSHBUG00000005061	SRRM3	88	68.833	Haplochromis_burtoni
ENSONIG00000012732	-	99	45.561	ENSIPUG00000012467	srrm3	87	46.416	Ictalurus_punctatus
ENSONIG00000012732	-	51	50.327	ENSJJAG00000023441	Srrm3	97	38.151	Jaculus_jaculus
ENSONIG00000012732	-	98	57.516	ENSKMAG00000013495	SRRM3	88	57.471	Kryptolebias_marmoratus
ENSONIG00000012732	-	51	51.316	ENSMGAG00000003690	SRRM3	76	50.168	Meleagris_gallopavo
ENSONIG00000012732	-	50	55.631	ENSMOCG00000002565	Srrm3	90	43.866	Microtus_ochrogaster
ENSONIG00000012732	-	66	61.404	ENSMALG00000000844	-	90	61.074	Monopterus_albus
ENSONIG00000012732	-	50	56.314	MGP_CAROLIEiJ_G0027845	-	84	55.068	Mus_caroli
ENSONIG00000012732	-	50	55.973	MGP_PahariEiJ_G0024425	Srrm3	88	67.857	Mus_pahari
ENSONIG00000012732	-	58	69.343	ENSORLG00000026242	-	87	63.361	Oryzias_latipes
ENSONIG00000012732	-	78	75.833	ENSORLG00020016592	-	54	64.426	Oryzias_latipes_hni
ENSONIG00000012732	-	78	75.833	ENSORLG00015022712	SRRM3	54	64.706	Oryzias_latipes_hsok
ENSONIG00000012732	-	65	57.326	ENSOMEG00000010768	-	53	63.305	Oryzias_melastigma
ENSONIG00000012732	-	51	57.095	ENSPTRG00000019317	SRRM3	90	43.907	Pan_troglodytes
ENSONIG00000012732	-	50	58.249	ENSPKIG00000017233	SRRM3	92	49.589	Paramormyrops_kingsleyae
ENSONIG00000012732	-	66	78.571	ENSPFOG00000009007	SRRM3	69	78.571	Poecilia_formosa
ENSONIG00000012732	-	97	56.260	ENSPMEG00000011981	-	88	58.649	Poecilia_mexicana
ENSONIG00000012732	-	79	80.451	ENSPREG00000008138	-	88	59.113	Poecilia_reticulata
ENSONIG00000012732	-	51	54.054	ENSPCOG00000028464	SRRM3	90	43.216	Propithecus_coquereli
ENSONIG00000012732	-	97	48.376	ENSPNAG00000009621	SRRM3	52	49.573	Pygocentrus_nattereri
ENSONIG00000012732	-	50	54.608	ENSRNOG00000001439	Srrm3	90	43.361	Rattus_norvegicus
ENSONIG00000012732	-	60	51.667	ENSSFOG00015001696	SRRM3	74	55.319	Scleropages_formosus
ENSONIG00000012732	-	97	56.033	ENSSMAG00000000476	SRRM3	89	63.201	Scophthalmus_maximus
ENSONIG00000012732	-	97	55.772	ENSSLDG00000020070	SRRM3	53	65.940	Seriola_lalandi_dorsalis
ENSONIG00000012732	-	92	54.545	ENSTNIG00000008549	-	50	63.746	Tetraodon_nigroviridis
ENSONIG00000012732	-	57	63.352	ENSXMAG00000005663	-	88	59.365	Xiphophorus_maculatus