EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000012754 (Gene tree)
Gene ID: 100696733
Gene Symbol: rbfox1l
Alias: -
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 12239 bases
Position: chrGL831225.1:117586-129824
Accession: 100696733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000016054	Fox-1_C	PF12414.8	1.4e-33	1	1
ENSONIP00000016054	RRM_1	PF00076.22	6.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000016069	-	1143	-	ENSONIP00000016054	380 (aa)	XP_005455413	I3K4K9

Gene Model

Click here to download ENSONIG00000012754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000012754's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000012754	rbfox1l	85	58.055	ENSONIG00000009549	rbfox3b	93	54.802
ENSONIG00000012754	rbfox1l	85	57.669	ENSONIG00000007282	-	64	72.687
ENSONIG00000012754	rbfox1l	63	54.704	ENSONIG00000008341	-	71	57.986
ENSONIG00000012754	rbfox1l	63	55.709	ENSONIG00000017998	rbfox2	84	51.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000012754	rbfox1l	97	89.757	ENSAPOG00000016304	rbfox1l	98	88.140	Acanthochromis_polyacanthus
ENSONIG00000012754	rbfox1l	100	87.664	ENSACIG00000006441	rbfox1l	100	87.664	Amphilophus_citrinellus
ENSONIG00000012754	rbfox1l	83	85.535	ENSAOCG00000020938	rbfox1l	94	83.438	Amphiprion_ocellaris
ENSONIG00000012754	rbfox1l	100	90.078	ENSAPEG00000008232	rbfox1l	100	88.512	Amphiprion_percula
ENSONIG00000012754	rbfox1l	100	86.162	ENSATEG00000022649	rbfox1l	100	86.162	Anabas_testudineus
ENSONIG00000012754	rbfox1l	64	72.510	ENSACAG00000011931	-	89	73.984	Anolis_carolinensis
ENSONIG00000012754	rbfox1l	100	99.211	ENSACLG00000021394	rbfox1l	100	99.211	Astatotilapia_calliptera
ENSONIG00000012754	rbfox1l	100	85.751	ENSAMXG00000010470	rbfox1l	100	85.751	Astyanax_mexicanus
ENSONIG00000012754	rbfox1l	100	54.061	ENSCPBG00000010944	-	100	55.980	Chrysemys_picta_bellii
ENSONIG00000012754	rbfox1l	100	87.240	ENSCSEG00000018898	rbfox1l	100	87.500	Cynoglossus_semilaevis
ENSONIG00000012754	rbfox1l	100	88.512	ENSCVAG00000007986	rbfox1l	100	87.467	Cyprinodon_variegatus
ENSONIG00000012754	rbfox1l	100	84.197	ENSDARG00000021184	rbfox1l	100	84.456	Danio_rerio
ENSONIG00000012754	rbfox1l	100	82.443	ENSELUG00000015077	rbfox1l	100	83.969	Esox_lucius
ENSONIG00000012754	rbfox1l	79	87.805	ENSFHEG00000016557	rbfox1l	95	87.805	Fundulus_heteroclitus
ENSONIG00000012754	rbfox1l	100	83.290	ENSGMOG00000005040	rbfox1l	100	83.290	Gadus_morhua
ENSONIG00000012754	rbfox1l	92	88.418	ENSGAFG00000013211	rbfox1l	97	88.418	Gambusia_affinis
ENSONIG00000012754	rbfox1l	100	88.512	ENSGACG00000010757	rbfox1l	100	88.512	Gasterosteus_aculeatus
ENSONIG00000012754	rbfox1l	65	68.254	ENSGAGG00000012440	-	84	72.016	Gopherus_agassizii
ENSONIG00000012754	rbfox1l	100	99.211	ENSHBUG00000013406	rbfox1l	100	99.211	Haplochromis_burtoni
ENSONIG00000012754	rbfox1l	100	84.635	ENSHCOG00000020771	rbfox1l	100	84.896	Hippocampus_comes
ENSONIG00000012754	rbfox1l	99	77.895	ENSIPUG00000000065	rbfox1l	99	79.213	Ictalurus_punctatus
ENSONIG00000012754	rbfox1l	100	87.273	ENSKMAG00000005146	rbfox1l	100	87.532	Kryptolebias_marmoratus
ENSONIG00000012754	rbfox1l	100	90.862	ENSLBEG00000017089	rbfox1l	100	90.862	Labrus_bergylta
ENSONIG00000012754	rbfox1l	100	90.339	ENSMAMG00000019480	rbfox1l	100	90.339	Mastacembelus_armatus
ENSONIG00000012754	rbfox1l	100	99.211	ENSMZEG00005016374	rbfox1l	100	99.211	Maylandia_zebra
ENSONIG00000012754	rbfox1l	100	89.034	ENSMMOG00000016530	rbfox1l	100	89.034	Mola_mola
ENSONIG00000012754	rbfox1l	100	86.162	ENSMALG00000009384	rbfox1l	100	86.162	Monopterus_albus
ENSONIG00000012754	rbfox1l	100	98.158	ENSNBRG00000003346	rbfox1l	100	98.158	Neolamprologus_brichardi
ENSONIG00000012754	rbfox1l	100	87.990	ENSORLG00000011269	rbfox1l	100	86.423	Oryzias_latipes
ENSONIG00000012754	rbfox1l	100	88.773	ENSORLG00020000162	rbfox1l	100	87.206	Oryzias_latipes_hni
ENSONIG00000012754	rbfox1l	100	88.773	ENSORLG00015013464	rbfox1l	100	87.206	Oryzias_latipes_hsok
ENSONIG00000012754	rbfox1l	100	89.295	ENSOMEG00000010584	rbfox1l	100	87.728	Oryzias_melastigma
ENSONIG00000012754	rbfox1l	100	86.979	ENSPKIG00000012029	rbfox1l	100	86.979	Paramormyrops_kingsleyae
ENSONIG00000012754	rbfox1l	100	80.729	ENSPMGG00000012082	rbfox1l	100	80.208	Periophthalmus_magnuspinnatus
ENSONIG00000012754	rbfox1l	100	89.034	ENSPFOG00000009338	rbfox1l	100	89.034	Poecilia_formosa
ENSONIG00000012754	rbfox1l	85	80.428	ENSPLAG00000012816	rbfox1l	99	80.428	Poecilia_latipinna
ENSONIG00000012754	rbfox1l	100	85.117	ENSPMEG00000017597	rbfox1l	100	85.117	Poecilia_mexicana
ENSONIG00000012754	rbfox1l	100	85.117	ENSPREG00000007940	rbfox1l	100	85.117	Poecilia_reticulata
ENSONIG00000012754	rbfox1l	100	98.947	ENSPNYG00000002098	rbfox1l	100	98.947	Pundamilia_nyererei
ENSONIG00000012754	rbfox1l	100	85.271	ENSPNAG00000001620	rbfox1l	100	85.013	Pygocentrus_nattereri
ENSONIG00000012754	rbfox1l	100	83.117	ENSSFOG00015000675	rbfox1l	100	83.377	Scleropages_formosus
ENSONIG00000012754	rbfox1l	100	88.512	ENSSMAG00000013090	rbfox1l	100	88.512	Scophthalmus_maximus
ENSONIG00000012754	rbfox1l	100	87.661	ENSSDUG00000008705	rbfox1l	100	87.404	Seriola_dumerili
ENSONIG00000012754	rbfox1l	100	87.887	ENSSLDG00000022256	rbfox1l	100	87.629	Seriola_lalandi_dorsalis
ENSONIG00000012754	rbfox1l	100	90.862	ENSSPAG00000016620	rbfox1l	100	89.295	Stegastes_partitus
ENSONIG00000012754	rbfox1l	96	84.595	ENSTRUG00000015905	rbfox1l	100	84.865	Takifugu_rubripes
ENSONIG00000012754	rbfox1l	64	80.669	ENSTNIG00000008088	rbfox1l	97	82.824	Tetraodon_nigroviridis
ENSONIG00000012754	rbfox1l	100	89.034	ENSXMAG00000023471	rbfox1l	100	89.034	Xiphophorus_maculatus