EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000013064 (Gene tree)
Gene ID: 100693892
Gene Symbol: vars
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 14802 bases
Position: chrGL831225.1:1751348-1766149
Accession: ZDB-GENE-010601-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000016426	tRNA-synt_1g	PF09334.11	2e-13	1	1
ENSONIP00000016427	tRNA-synt_1g	PF09334.11	3e-13	1	1
ENSONIP00000016426	Anticodon_1	PF08264.13	2.4e-36	1	1
ENSONIP00000016427	Anticodon_1	PF08264.13	2.9e-36	1	1
ENSONIP00000016426	tRNA-synt_1	PF00133.22	1.5e-207	1	1
ENSONIP00000016427	tRNA-synt_1	PF00133.22	2.7e-205	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000016441	-	3917	-	ENSONIP00000016426	1148 (aa)	-	I3K5N1
ENSONIT00000016442	-	3804	-	ENSONIP00000016427	1267 (aa)	-	I3K5N2

Gene Model

Click here to download ENSONIG00000013064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000013064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000013064	vars	59	57.069	ENSONIG00000004734	vars2	69	57.069

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000013064	vars	99	67.826	ENSG00000204394	VARS	99	72.086	Homo_sapiens
ENSONIG00000013064	vars	94	92.472	ENSAPOG00000020691	vars	96	90.721	Acanthochromis_polyacanthus
ENSONIG00000013064	vars	94	92.472	ENSAPOG00000020921	vars	96	90.721	Acanthochromis_polyacanthus
ENSONIG00000013064	vars	99	68.115	ENSAMEG00000006417	VARS	100	65.183	Ailuropoda_melanoleuca
ENSONIG00000013064	vars	100	94.174	ENSACIG00000013752	vars	100	94.090	Amphilophus_citrinellus
ENSONIG00000013064	vars	100	93.206	ENSAOCG00000002447	vars	99	91.321	Amphiprion_ocellaris
ENSONIG00000013064	vars	100	93.118	ENSAPEG00000010638	vars	99	91.243	Amphiprion_percula
ENSONIG00000013064	vars	100	88.271	ENSATEG00000020219	vars	100	88.031	Anabas_testudineus
ENSONIG00000013064	vars	89	76.471	ENSACAG00000029133	-	99	71.589	Anolis_carolinensis
ENSONIG00000013064	vars	99	67.826	ENSANAG00000015453	VARS	100	65.364	Aotus_nancymaae
ENSONIG00000013064	vars	100	99.129	ENSACLG00000025699	vars	97	97.192	Astatotilapia_calliptera
ENSONIG00000013064	vars	95	82.224	ENSAMXG00000017716	vars	96	80.921	Astyanax_mexicanus
ENSONIG00000013064	vars	99	68.297	ENSBTAG00000005631	VARS	100	65.676	Bos_taurus
ENSONIG00000013064	vars	99	67.826	ENSCJAG00000002604	VARS	100	65.129	Callithrix_jacchus
ENSONIG00000013064	vars	99	67.652	ENSCAFG00000000636	VARS	100	64.871	Canis_familiaris
ENSONIG00000013064	vars	93	69.439	ENSCAFG00020020790	VARS	96	66.195	Canis_lupus_dingo
ENSONIG00000013064	vars	99	68.384	ENSCHIG00000011008	VARS	100	65.598	Capra_hircus
ENSONIG00000013064	vars	99	67.565	ENSTSYG00000001567	VARS	100	65.051	Carlito_syrichta
ENSONIG00000013064	vars	99	68.343	ENSCAPG00000013736	VARS	98	68.087	Cavia_aperea
ENSONIG00000013064	vars	99	68.343	ENSCPOG00000000870	VARS	100	64.738	Cavia_porcellus
ENSONIG00000013064	vars	99	67.969	ENSCCAG00000035656	VARS	100	65.336	Cebus_capucinus
ENSONIG00000013064	vars	99	67.997	ENSCATG00000022394	VARS	100	65.676	Cercocebus_atys
ENSONIG00000013064	vars	98	65.919	ENSCLAG00000009470	VARS	97	63.659	Chinchilla_lanigera
ENSONIG00000013064	vars	99	67.823	ENSCSAG00000008784	VARS	100	65.364	Chlorocebus_sabaeus
ENSONIG00000013064	vars	85	74.233	ENSCPBG00000007943	VARS	96	74.233	Chrysemys_picta_bellii
ENSONIG00000013064	vars	99	67.997	ENSCANG00000033570	VARS	100	65.520	Colobus_angolensis_palliatus
ENSONIG00000013064	vars	99	67.388	ENSCGRG00001005686	Vars	100	65.051	Cricetulus_griseus_chok1gshd
ENSONIG00000013064	vars	99	63.069	ENSCGRG00000013352	Vars	78	63.110	Cricetulus_griseus_crigri
ENSONIG00000013064	vars	100	85.192	ENSCSEG00000019652	vars	100	83.754	Cynoglossus_semilaevis
ENSONIG00000013064	vars	100	92.247	ENSCVAG00000022398	vars	100	91.186	Cyprinodon_variegatus
ENSONIG00000013064	vars	100	85.901	ENSDARG00000044575	vars	100	83.632	Danio_rerio
ENSONIG00000013064	vars	91	70.247	ENSDORG00000016433	Vars	94	70.332	Dipodomys_ordii
ENSONIG00000013064	vars	76	73.905	ENSETEG00000003824	VARS	76	73.905	Echinops_telfairi
ENSONIG00000013064	vars	55	73.874	ENSEBUG00000007086	vars	82	73.310	Eptatretus_burgeri
ENSONIG00000013064	vars	64	65.527	ENSEBUG00000004637	vars	100	65.527	Eptatretus_burgeri
ENSONIG00000013064	vars	99	68.522	ENSEASG00005015673	VARS	100	65.833	Equus_asinus_asinus
ENSONIG00000013064	vars	99	68.288	ENSECAG00000014620	VARS	100	65.547	Equus_caballus
ENSONIG00000013064	vars	80	71.178	ENSEEUG00000004116	VARS	73	71.178	Erinaceus_europaeus
ENSONIG00000013064	vars	100	85.256	ENSELUG00000006550	vars	97	83.372	Esox_lucius
ENSONIG00000013064	vars	99	68.087	ENSFCAG00000004510	VARS	100	65.285	Felis_catus
ENSONIG00000013064	vars	89	71.091	ENSFDAG00000011401	VARS	100	69.561	Fukomys_damarensis
ENSONIG00000013064	vars	100	91.115	ENSFHEG00000010672	vars	100	89.392	Fundulus_heteroclitus
ENSONIG00000013064	vars	100	85.381	ENSGMOG00000014908	vars	100	80.930	Gadus_morhua
ENSONIG00000013064	vars	100	91.725	ENSGAFG00000021630	vars	100	90.703	Gambusia_affinis
ENSONIG00000013064	vars	100	90.609	ENSGACG00000009601	vars	100	85.280	Gasterosteus_aculeatus
ENSONIG00000013064	vars	99	68.170	ENSGGOG00000011364	VARS	100	65.652	Gorilla_gorilla
ENSONIG00000013064	vars	100	99.129	ENSHBUG00000017151	vars	97	97.270	Haplochromis_burtoni
ENSONIG00000013064	vars	99	67.624	ENSHGLG00000011646	VARS	100	64.784	Heterocephalus_glaber_female
ENSONIG00000013064	vars	99	62.181	ENSHGLG00100018062	VARS	99	61.577	Heterocephalus_glaber_male
ENSONIG00000013064	vars	99	86.510	ENSHCOG00000012198	vars	99	84.903	Hippocampus_comes
ENSONIG00000013064	vars	100	85.690	ENSIPUG00000005218	vars	100	82.697	Ictalurus_punctatus
ENSONIG00000013064	vars	99	68.522	ENSSTOG00000013112	VARS	100	65.364	Ictidomys_tridecemlineatus
ENSONIG00000013064	vars	99	56.510	ENSJJAG00000015343	-	100	52.960	Jaculus_jaculus
ENSONIG00000013064	vars	99	67.767	ENSJJAG00000019749	-	100	64.425	Jaculus_jaculus
ENSONIG00000013064	vars	100	88.003	ENSKMAG00000009455	vars	100	88.003	Kryptolebias_marmoratus
ENSONIG00000013064	vars	100	88.260	ENSLBEG00000010341	vars	100	86.977	Labrus_bergylta
ENSONIG00000013064	vars	94	70.211	ENSLACG00000015232	VARS	99	67.023	Latimeria_chalumnae
ENSONIG00000013064	vars	99	78.746	ENSLOCG00000004240	vars	100	74.824	Lepisosteus_oculatus
ENSONIG00000013064	vars	99	68.146	ENSLAFG00000023090	VARS	100	65.020	Loxodonta_africana
ENSONIG00000013064	vars	99	67.823	ENSMFAG00000001032	VARS	100	65.520	Macaca_fascicularis
ENSONIG00000013064	vars	99	67.823	ENSMMUG00000006828	VARS	100	65.520	Macaca_mulatta
ENSONIG00000013064	vars	99	67.823	ENSMNEG00000042072	VARS	100	65.520	Macaca_nemestrina
ENSONIG00000013064	vars	99	67.910	ENSMLEG00000039307	VARS	100	65.598	Mandrillus_leucophaeus
ENSONIG00000013064	vars	100	92.334	ENSMAMG00000003949	vars	100	90.211	Mastacembelus_armatus
ENSONIG00000013064	vars	100	99.129	ENSMZEG00005018327	vars	97	97.270	Maylandia_zebra
ENSONIG00000013064	vars	99	67.215	ENSMAUG00000006715	Vars	100	64.816	Mesocricetus_auratus
ENSONIG00000013064	vars	99	68.142	ENSMICG00000003548	VARS	100	64.973	Microcebus_murinus
ENSONIG00000013064	vars	97	68.397	ENSMOCG00000015404	Vars	100	64.034	Microtus_ochrogaster
ENSONIG00000013064	vars	100	88.502	ENSMMOG00000015801	vars	100	87.697	Mola_mola
ENSONIG00000013064	vars	99	68.690	ENSMODG00000015204	-	100	65.520	Monodelphis_domestica
ENSONIG00000013064	vars	99	92.167	ENSMALG00000022532	vars	99	89.712	Monopterus_albus
ENSONIG00000013064	vars	99	68.233	MGP_CAROLIEiJ_G0021491	Vars	100	65.520	Mus_caroli
ENSONIG00000013064	vars	99	68.059	ENSMUSG00000007029	Vars	100	65.364	Mus_musculus
ENSONIG00000013064	vars	99	67.972	MGP_PahariEiJ_G0020486	Vars	100	65.098	Mus_pahari
ENSONIG00000013064	vars	99	68.146	MGP_SPRETEiJ_G0022396	Vars	100	65.442	Mus_spretus
ENSONIG00000013064	vars	99	67.913	ENSMPUG00000010821	VARS	100	65.105	Mustela_putorius_furo
ENSONIG00000013064	vars	75	72.414	ENSMLUG00000013126	VARS	100	68.268	Myotis_lucifugus
ENSONIG00000013064	vars	99	67.885	ENSNGAG00000012151	Vars	100	64.789	Nannospalax_galili
ENSONIG00000013064	vars	100	98.955	ENSNBRG00000020520	vars	100	97.036	Neolamprologus_brichardi
ENSONIG00000013064	vars	99	68.000	ENSNLEG00000006351	VARS	100	65.285	Nomascus_leucogenys
ENSONIG00000013064	vars	93	71.944	ENSMEUG00000011378	VARS	100	63.199	Notamacropus_eugenii
ENSONIG00000013064	vars	99	68.348	ENSOPRG00000003607	VARS	100	65.833	Ochotona_princeps
ENSONIG00000013064	vars	99	67.015	ENSODEG00000017681	VARS	100	64.078	Octodon_degus
ENSONIG00000013064	vars	75	72.576	ENSOANG00000005400	VARS	98	67.060	Ornithorhynchus_anatinus
ENSONIG00000013064	vars	99	66.406	ENSOCUG00000022463	VARS	100	63.601	Oryctolagus_cuniculus
ENSONIG00000013064	vars	100	90.752	ENSORLG00000013063	vars	100	88.691	Oryzias_latipes
ENSONIG00000013064	vars	100	91.573	ENSORLG00020003504	vars	100	89.261	Oryzias_latipes_hni
ENSONIG00000013064	vars	100	91.739	ENSORLG00015009001	vars	100	89.408	Oryzias_latipes_hsok
ENSONIG00000013064	vars	100	92.087	ENSOMEG00000015016	vars	100	89.798	Oryzias_melastigma
ENSONIG00000013064	vars	99	67.647	ENSOGAG00000007515	VARS	100	64.596	Otolemur_garnettii
ENSONIG00000013064	vars	50	64.399	ENSOARG00000004625	-	91	64.567	Ovis_aries
ENSONIG00000013064	vars	99	67.913	ENSPPAG00000034012	VARS	100	65.285	Pan_paniscus
ENSONIG00000013064	vars	99	68.087	ENSPPRG00000014855	VARS	100	65.285	Panthera_pardus
ENSONIG00000013064	vars	91	70.162	ENSPTIG00000010462	VARS	94	69.006	Panthera_tigris_altaica
ENSONIG00000013064	vars	99	67.913	ENSPTRG00000017985	VARS	100	65.285	Pan_troglodytes
ENSONIG00000013064	vars	99	66.150	ENSPANG00000014565	VARS	100	64.025	Papio_anubis
ENSONIG00000013064	vars	99	83.564	ENSPKIG00000016304	vars	100	80.868	Paramormyrops_kingsleyae
ENSONIG00000013064	vars	100	85.279	ENSPMGG00000023909	vars	100	84.530	Periophthalmus_magnuspinnatus
ENSONIG00000013064	vars	99	67.388	ENSPEMG00000006639	Vars	100	65.129	Peromyscus_maniculatus_bairdii
ENSONIG00000013064	vars	99	68.343	ENSPCIG00000018553	VARS	100	65.442	Phascolarctos_cinereus
ENSONIG00000013064	vars	100	91.725	ENSPFOG00000015690	vars	100	90.391	Poecilia_formosa
ENSONIG00000013064	vars	100	91.551	ENSPLAG00000009590	vars	100	90.234	Poecilia_latipinna
ENSONIG00000013064	vars	100	91.638	ENSPMEG00000004708	vars	100	90.312	Poecilia_mexicana
ENSONIG00000013064	vars	94	93.320	ENSPREG00000013264	vars	100	86.740	Poecilia_reticulata
ENSONIG00000013064	vars	99	66.435	ENSPPYG00000016460	VARS	100	63.544	Pongo_abelii
ENSONIG00000013064	vars	85	66.075	ENSPCAG00000013565	VARS	86	66.075	Procavia_capensis
ENSONIG00000013064	vars	99	67.767	ENSPCOG00000010942	VARS	100	65.234	Propithecus_coquereli
ENSONIG00000013064	vars	99	65.538	ENSPVAG00000012403	VARS	100	63.331	Pteropus_vampyrus
ENSONIG00000013064	vars	100	99.216	ENSPNYG00000022511	vars	100	97.348	Pundamilia_nyererei
ENSONIG00000013064	vars	100	85.851	ENSPNAG00000020962	vars	100	83.605	Pygocentrus_nattereri
ENSONIG00000013064	vars	99	67.913	ENSRNOG00000000867	Vars	100	65.027	Rattus_norvegicus
ENSONIG00000013064	vars	99	67.910	ENSRBIG00000041669	VARS	100	65.442	Rhinopithecus_bieti
ENSONIG00000013064	vars	99	67.910	ENSRROG00000045490	VARS	100	65.442	Rhinopithecus_roxellana
ENSONIG00000013064	vars	99	67.565	ENSSBOG00000035402	VARS	100	65.051	Saimiri_boliviensis_boliviensis
ENSONIG00000013064	vars	99	69.211	ENSSHAG00000006937	VARS	100	65.015	Sarcophilus_harrisii
ENSONIG00000013064	vars	99	83.449	ENSSFOG00015014272	vars	100	80.062	Scleropages_formosus
ENSONIG00000013064	vars	100	90.261	ENSSMAG00000009596	vars	99	88.318	Scophthalmus_maximus
ENSONIG00000013064	vars	100	93.826	ENSSDUG00000014177	vars	100	91.589	Seriola_dumerili
ENSONIG00000013064	vars	100	93.652	ENSSLDG00000025316	vars	100	91.355	Seriola_lalandi_dorsalis
ENSONIG00000013064	vars	100	92.509	ENSSPAG00000017068	vars	100	90.930	Stegastes_partitus
ENSONIG00000013064	vars	99	67.507	ENSSSCG00000038950	VARS	100	64.844	Sus_scrofa
ENSONIG00000013064	vars	82	82.037	ENSTRUG00000012307	vars	98	82.105	Takifugu_rubripes
ENSONIG00000013064	vars	100	88.676	ENSTNIG00000008011	vars	100	87.697	Tetraodon_nigroviridis
ENSONIG00000013064	vars	99	61.451	ENSTTRG00000014128	VARS	100	59.358	Tursiops_truncatus
ENSONIG00000013064	vars	99	66.262	ENSUAMG00000010424	VARS	100	62.886	Ursus_americanus
ENSONIG00000013064	vars	92	71.400	ENSUMAG00000013486	VARS	98	64.476	Ursus_maritimus
ENSONIG00000013064	vars	99	67.882	ENSVVUG00000021323	VARS	100	64.844	Vulpes_vulpes
ENSONIG00000013064	vars	99	68.394	ENSXETG00000024076	vars	100	64.025	Xenopus_tropicalis
ENSONIG00000013064	vars	100	89.983	ENSXCOG00000019172	vars	100	89.345	Xiphophorus_couchianus
ENSONIG00000013064	vars	100	91.638	ENSXMAG00000010927	vars	100	90.469	Xiphophorus_maculatus