EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000013131 (Gene tree)
Gene ID: -
Gene Symbol: tsr1
Alias: -
Full Name: TSR1%2C 20S rRNA accumulation%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 11628 bases
Position: chrGL831141.1:7857375-7869002
Accession: ZDB-GENE-030131-3762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000016519	AARP2CN	PF08142.12	3.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000016534	-	2487	-	ENSONIP00000016519	828 (aa)	-	I3K5X4

Gene Model

Click here to download ENSONIG00000013131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000013131's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000013131	tsr1	98	56.196	ENSG00000167721	TSR1	98	56.442	Homo_sapiens
ENSONIG00000013131	tsr1	100	86.572	ENSAPOG00000020891	tsr1	100	88.200	Acanthochromis_polyacanthus
ENSONIG00000013131	tsr1	99	55.609	ENSAMEG00000007599	TSR1	99	55.730	Ailuropoda_melanoleuca
ENSONIG00000013131	tsr1	100	90.217	ENSACIG00000007090	tsr1	100	89.734	Amphilophus_citrinellus
ENSONIG00000013131	tsr1	100	86.154	ENSAOCG00000023284	tsr1	100	86.627	Amphiprion_ocellaris
ENSONIG00000013131	tsr1	93	85.660	ENSAPEG00000008452	tsr1	100	86.168	Amphiprion_percula
ENSONIG00000013131	tsr1	100	85.493	ENSATEG00000021961	tsr1	100	85.612	Anabas_testudineus
ENSONIG00000013131	tsr1	90	58.917	ENSAPLG00000013422	TSR1	100	58.816	Anas_platyrhynchos
ENSONIG00000013131	tsr1	71	49.073	ENSACAG00000000859	TSR1	92	49.663	Anolis_carolinensis
ENSONIG00000013131	tsr1	98	56.404	ENSANAG00000031071	TSR1	98	56.281	Aotus_nancymaae
ENSONIG00000013131	tsr1	100	94.306	ENSACLG00000007595	tsr1	99	94.306	Astatotilapia_calliptera
ENSONIG00000013131	tsr1	51	75.236	ENSAMXG00000008470	tsr1	89	75.236	Astyanax_mexicanus
ENSONIG00000013131	tsr1	99	56.448	ENSBTAG00000004225	TSR1	99	55.822	Bos_taurus
ENSONIG00000013131	tsr1	65	30.833	WBGene00022021	Y61A9LA.10	51	30.833	Caenorhabditis_elegans
ENSONIG00000013131	tsr1	96	39.066	WBGene00006497	tag-151	96	39.387	Caenorhabditis_elegans
ENSONIG00000013131	tsr1	97	55.720	ENSCJAG00000012456	TSR1	98	55.597	Callithrix_jacchus
ENSONIG00000013131	tsr1	99	55.247	ENSCAFG00000002106	-	99	55.222	Canis_familiaris
ENSONIG00000013131	tsr1	89	53.129	ENSCAFG00000019273	-	100	56.871	Canis_familiaris
ENSONIG00000013131	tsr1	99	55.127	ENSCAFG00020009728	TSR1	99	55.102	Canis_lupus_dingo
ENSONIG00000013131	tsr1	99	56.934	ENSCHIG00000023935	TSR1	99	56.145	Capra_hircus
ENSONIG00000013131	tsr1	99	56.454	ENSTSYG00000005468	TSR1	99	56.227	Carlito_syrichta
ENSONIG00000013131	tsr1	92	55.890	ENSCPOG00000014833	TSR1	99	55.267	Cavia_porcellus
ENSONIG00000013131	tsr1	92	54.902	ENSCCAG00000028962	TSR1	98	54.771	Cebus_capucinus
ENSONIG00000013131	tsr1	98	56.059	ENSCATG00000044262	TSR1	99	56.426	Cercocebus_atys
ENSONIG00000013131	tsr1	99	56.744	ENSCLAG00000005567	TSR1	99	56.744	Chinchilla_lanigera
ENSONIG00000013131	tsr1	98	56.181	ENSCSAG00000013788	TSR1	99	56.548	Chlorocebus_sabaeus
ENSONIG00000013131	tsr1	98	56.442	ENSCPBG00000020363	TSR1	97	56.227	Chrysemys_picta_bellii
ENSONIG00000013131	tsr1	96	44.772	ENSCING00000020658	-	99	44.772	Ciona_intestinalis
ENSONIG00000013131	tsr1	96	44.183	ENSCSAVG00000001875	-	100	44.183	Ciona_savignyi
ENSONIG00000013131	tsr1	98	50.737	ENSCANG00000033056	TSR1	99	52.574	Colobus_angolensis_palliatus
ENSONIG00000013131	tsr1	99	55.043	ENSCGRG00001023942	Tsr1	99	54.843	Cricetulus_griseus_chok1gshd
ENSONIG00000013131	tsr1	100	79.257	ENSCSEG00000013009	tsr1	100	80.096	Cynoglossus_semilaevis
ENSONIG00000013131	tsr1	100	83.135	ENSCVAG00000000506	tsr1	100	82.660	Cyprinodon_variegatus
ENSONIG00000013131	tsr1	100	75.962	ENSDARG00000007744	tsr1	100	76.082	Danio_rerio
ENSONIG00000013131	tsr1	99	56.917	ENSDNOG00000004715	TSR1	99	57.857	Dasypus_novemcinctus
ENSONIG00000013131	tsr1	99	55.529	ENSDORG00000016371	-	99	55.772	Dipodomys_ordii
ENSONIG00000013131	tsr1	96	49.121	ENSDORG00000023234	-	99	49.372	Dipodomys_ordii
ENSONIG00000013131	tsr1	96	44.349	FBgn0037073	Tsr1	96	44.226	Drosophila_melanogaster
ENSONIG00000013131	tsr1	87	67.869	ENSETEG00000017534	TSR1	88	67.869	Echinops_telfairi
ENSONIG00000013131	tsr1	95	51.950	ENSEBUG00000013731	TSR1	98	51.637	Eptatretus_burgeri
ENSONIG00000013131	tsr1	99	55.932	ENSEASG00005009302	TSR1	97	55.516	Equus_asinus_asinus
ENSONIG00000013131	tsr1	99	56.000	ENSECAG00000009114	TSR1	99	56.416	Equus_caballus
ENSONIG00000013131	tsr1	100	74.882	ENSELUG00000020984	tsr1	96	75.566	Esox_lucius
ENSONIG00000013131	tsr1	99	55.394	ENSFCAG00000006313	TSR1	99	54.850	Felis_catus
ENSONIG00000013131	tsr1	100	58.363	ENSFALG00000006532	TSR1	99	58.363	Ficedula_albicollis
ENSONIG00000013131	tsr1	99	56.083	ENSFDAG00000006038	TSR1	99	55.636	Fukomys_damarensis
ENSONIG00000013131	tsr1	100	81.861	ENSFHEG00000003626	tsr1	99	82.837	Fundulus_heteroclitus
ENSONIG00000013131	tsr1	100	73.551	ENSGMOG00000010336	tsr1	100	73.285	Gadus_morhua
ENSONIG00000013131	tsr1	100	82.800	ENSGAFG00000012993	tsr1	99	83.593	Gambusia_affinis
ENSONIG00000013131	tsr1	100	82.310	ENSGACG00000010843	tsr1	100	81.829	Gasterosteus_aculeatus
ENSONIG00000013131	tsr1	98	56.196	ENSGAGG00000025619	-	99	55.744	Gopherus_agassizii
ENSONIG00000013131	tsr1	98	56.074	ENSGGOG00000001704	TSR1	98	56.687	Gorilla_gorilla
ENSONIG00000013131	tsr1	100	94.320	ENSHBUG00000017904	tsr1	100	93.655	Haplochromis_burtoni
ENSONIG00000013131	tsr1	96	49.372	ENSHGLG00000015688	-	98	49.121	Heterocephalus_glaber_female
ENSONIG00000013131	tsr1	99	55.772	ENSHGLG00000012806	-	99	56.780	Heterocephalus_glaber_female
ENSONIG00000013131	tsr1	99	55.772	ENSHGLG00100015392	TSR1	99	56.780	Heterocephalus_glaber_male
ENSONIG00000013131	tsr1	100	80.556	ENSHCOG00000001432	tsr1	100	80.072	Hippocampus_comes
ENSONIG00000013131	tsr1	100	75.149	ENSIPUG00000004618	tsr1	100	75.149	Ictalurus_punctatus
ENSONIG00000013131	tsr1	99	56.590	ENSSTOG00000011819	TSR1	99	57.298	Ictidomys_tridecemlineatus
ENSONIG00000013131	tsr1	91	53.614	ENSJJAG00000019505	Tsr1	95	53.166	Jaculus_jaculus
ENSONIG00000013131	tsr1	100	83.933	ENSKMAG00000005763	tsr1	99	85.012	Kryptolebias_marmoratus
ENSONIG00000013131	tsr1	100	83.510	ENSLBEG00000021823	tsr1	99	85.273	Labrus_bergylta
ENSONIG00000013131	tsr1	100	57.536	ENSLACG00000002197	TSR1	100	58.014	Latimeria_chalumnae
ENSONIG00000013131	tsr1	100	56.886	ENSLOCG00000006491	TSR1	99	56.938	Lepisosteus_oculatus
ENSONIG00000013131	tsr1	98	56.304	ENSMFAG00000021330	TSR1	99	56.671	Macaca_fascicularis
ENSONIG00000013131	tsr1	99	55.811	ENSMMUG00000017519	TSR1	99	56.548	Macaca_mulatta
ENSONIG00000013131	tsr1	99	55.932	ENSMNEG00000031382	TSR1	99	56.671	Macaca_nemestrina
ENSONIG00000013131	tsr1	98	55.936	ENSMLEG00000036733	TSR1	99	56.304	Mandrillus_leucophaeus
ENSONIG00000013131	tsr1	100	84.104	ENSMAMG00000017918	tsr1	99	84.816	Mastacembelus_armatus
ENSONIG00000013131	tsr1	100	93.602	ENSMZEG00005007477	tsr1	100	93.365	Maylandia_zebra
ENSONIG00000013131	tsr1	100	56.799	ENSMGAG00000005576	TSR1	100	56.903	Meleagris_gallopavo
ENSONIG00000013131	tsr1	99	56.516	ENSMICG00000012943	TSR1	99	55.971	Microcebus_murinus
ENSONIG00000013131	tsr1	99	55.340	ENSMOCG00000022764	Tsr1	99	54.776	Microtus_ochrogaster
ENSONIG00000013131	tsr1	100	82.820	ENSMMOG00000014280	tsr1	100	84.458	Mola_mola
ENSONIG00000013131	tsr1	99	57.126	ENSMODG00000010658	TSR1	99	56.325	Monodelphis_domestica
ENSONIG00000013131	tsr1	100	86.158	ENSMALG00000011681	tsr1	100	86.516	Monopterus_albus
ENSONIG00000013131	tsr1	99	55.461	MGP_CAROLIEiJ_G0016727	Tsr1	99	55.461	Mus_caroli
ENSONIG00000013131	tsr1	99	56.068	ENSMUSG00000038335	Tsr1	99	56.068	Mus_musculus
ENSONIG00000013131	tsr1	99	56.258	MGP_PahariEiJ_G0017864	Tsr1	99	56.432	Mus_pahari
ENSONIG00000013131	tsr1	99	56.068	MGP_SPRETEiJ_G0017570	Tsr1	99	56.068	Mus_spretus
ENSONIG00000013131	tsr1	81	58.936	ENSMPUG00000013000	TSR1	100	58.789	Mustela_putorius_furo
ENSONIG00000013131	tsr1	99	56.744	ENSMLUG00000003505	TSR1	99	55.957	Myotis_lucifugus
ENSONIG00000013131	tsr1	100	94.681	ENSNBRG00000020728	tsr1	99	94.681	Neolamprologus_brichardi
ENSONIG00000013131	tsr1	98	52.276	ENSNLEG00000017184	TSR1	98	52.891	Nomascus_leucogenys
ENSONIG00000013131	tsr1	99	53.019	ENSMEUG00000015828	TSR1	99	53.069	Notamacropus_eugenii
ENSONIG00000013131	tsr1	99	56.379	ENSOCUG00000014256	TSR1	99	55.716	Oryctolagus_cuniculus
ENSONIG00000013131	tsr1	100	83.155	ENSORLG00000004926	tsr1	99	83.155	Oryzias_latipes
ENSONIG00000013131	tsr1	100	83.254	ENSORLG00020008792	tsr1	99	83.254	Oryzias_latipes_hni
ENSONIG00000013131	tsr1	100	83.274	ENSORLG00015013838	tsr1	99	83.274	Oryzias_latipes_hsok
ENSONIG00000013131	tsr1	100	82.722	ENSOMEG00000004830	tsr1	99	82.722	Oryzias_melastigma
ENSONIG00000013131	tsr1	99	55.060	ENSOGAG00000004492	TSR1	99	55.060	Otolemur_garnettii
ENSONIG00000013131	tsr1	99	56.865	ENSOARG00000015437	TSR1	97	56.197	Ovis_aries
ENSONIG00000013131	tsr1	98	56.196	ENSPPAG00000036355	TSR1	98	56.442	Pan_paniscus
ENSONIG00000013131	tsr1	99	55.030	ENSPPRG00000015519	-	99	54.371	Panthera_pardus
ENSONIG00000013131	tsr1	99	55.152	ENSPTIG00000010608	TSR1	99	54.491	Panthera_tigris_altaica
ENSONIG00000013131	tsr1	98	56.196	ENSPTRG00000008547	TSR1	98	56.442	Pan_troglodytes
ENSONIG00000013131	tsr1	98	53.431	ENSPANG00000024463	TSR1	99	54.289	Papio_anubis
ENSONIG00000013131	tsr1	100	73.325	ENSPKIG00000013972	tsr1	100	73.735	Paramormyrops_kingsleyae
ENSONIG00000013131	tsr1	87	56.708	ENSPSIG00000018258	TSR1	99	56.241	Pelodiscus_sinensis
ENSONIG00000013131	tsr1	99	81.356	ENSPMGG00000011577	tsr1	99	81.356	Periophthalmus_magnuspinnatus
ENSONIG00000013131	tsr1	99	54.800	ENSPEMG00000018033	Tsr1	99	54.479	Peromyscus_maniculatus_bairdii
ENSONIG00000013131	tsr1	99	56.303	ENSPCIG00000009357	TSR1	97	56.459	Phascolarctos_cinereus
ENSONIG00000013131	tsr1	100	83.012	ENSPFOG00000004483	TSR1	100	83.075	Poecilia_formosa
ENSONIG00000013131	tsr1	100	82.270	ENSPLAG00000022320	tsr1	99	83.214	Poecilia_latipinna
ENSONIG00000013131	tsr1	100	82.270	ENSPMEG00000004577	tsr1	99	83.333	Poecilia_mexicana
ENSONIG00000013131	tsr1	97	82.725	ENSPREG00000010354	tsr1	96	82.609	Poecilia_reticulata
ENSONIG00000013131	tsr1	98	51.644	ENSPPYG00000007792	TSR1	98	52.010	Pongo_abelii
ENSONIG00000013131	tsr1	52	62.791	ENSPCAG00000012973	-	70	63.415	Procavia_capensis
ENSONIG00000013131	tsr1	99	56.151	ENSPCOG00000017928	TSR1	99	55.435	Propithecus_coquereli
ENSONIG00000013131	tsr1	99	56.189	ENSPVAG00000002162	TSR1	99	55.036	Pteropus_vampyrus
ENSONIG00000013131	tsr1	100	94.306	ENSPNYG00000016163	tsr1	99	94.306	Pundamilia_nyererei
ENSONIG00000013131	tsr1	100	75.238	ENSPNAG00000008659	tsr1	100	75.476	Pygocentrus_nattereri
ENSONIG00000013131	tsr1	99	55.407	ENSRNOG00000002980	Tsr1	99	55.314	Rattus_norvegicus
ENSONIG00000013131	tsr1	99	55.932	ENSRBIG00000040016	TSR1	99	55.730	Rhinopithecus_bieti
ENSONIG00000013131	tsr1	99	55.690	ENSRROG00000030361	TSR1	99	55.489	Rhinopithecus_roxellana
ENSONIG00000013131	tsr1	98	56.074	ENSSBOG00000020785	TSR1	98	56.564	Saimiri_boliviensis_boliviensis
ENSONIG00000013131	tsr1	99	56.235	ENSSHAG00000011394	TSR1	99	56.832	Sarcophilus_harrisii
ENSONIG00000013131	tsr1	100	75.633	ENSSFOG00015005455	tsr1	100	74.970	Scleropages_formosus
ENSONIG00000013131	tsr1	100	83.413	ENSSMAG00000009504	tsr1	100	84.248	Scophthalmus_maximus
ENSONIG00000013131	tsr1	100	87.247	ENSSDUG00000012074	tsr1	99	88.200	Seriola_dumerili
ENSONIG00000013131	tsr1	100	88.172	ENSSLDG00000002031	tsr1	99	88.292	Seriola_lalandi_dorsalis
ENSONIG00000013131	tsr1	92	56.800	ENSSARG00000000759	TSR1	93	56.800	Sorex_araneus
ENSONIG00000013131	tsr1	100	57.401	ENSSPUG00000007042	TSR1	99	58.029	Sphenodon_punctatus
ENSONIG00000013131	tsr1	100	85.294	ENSSPAG00000021951	tsr1	100	86.905	Stegastes_partitus
ENSONIG00000013131	tsr1	99	56.901	ENSSSCG00000038534	TSR1	99	56.235	Sus_scrofa
ENSONIG00000013131	tsr1	90	60.134	ENSTGUG00000005883	TSR1	100	60.000	Taeniopygia_guttata
ENSONIG00000013131	tsr1	100	82.713	ENSTRUG00000004665	tsr1	100	82.713	Takifugu_rubripes
ENSONIG00000013131	tsr1	99	83.212	ENSTNIG00000016196	tsr1	100	83.981	Tetraodon_nigroviridis
ENSONIG00000013131	tsr1	66	71.538	ENSTBEG00000015275	-	66	71.538	Tupaia_belangeri
ENSONIG00000013131	tsr1	99	56.501	ENSTTRG00000001177	TSR1	99	55.875	Tursiops_truncatus
ENSONIG00000013131	tsr1	99	55.206	ENSUAMG00000025160	TSR1	99	54.600	Ursus_americanus
ENSONIG00000013131	tsr1	96	55.138	ENSUMAG00000009294	TSR1	98	54.907	Ursus_maritimus
ENSONIG00000013131	tsr1	83	50.935	ENSVPAG00000000228	TSR1	99	50.213	Vicugna_pacos
ENSONIG00000013131	tsr1	99	55.368	ENSVVUG00000021767	TSR1	99	55.342	Vulpes_vulpes
ENSONIG00000013131	tsr1	100	52.990	ENSXETG00000023797	tsr1	100	53.349	Xenopus_tropicalis
ENSONIG00000013131	tsr1	100	83.595	ENSXCOG00000009635	tsr1	100	84.318	Xiphophorus_couchianus
ENSONIG00000013131	tsr1	100	82.444	ENSXMAG00000001397	tsr1	97	83.473	Xiphophorus_maculatus