EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSONIG00000013135 (Gene tree)
Gene ID
-
Gene Symbol
rpa1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Oreochromis_niloticus
Status
putative
Strand
Minus strand
Length
28694 bases
Position
chrGL831141.1:8239151-8267844
Accession
ZDB-GENE-030912-3
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSONIP00000016523tRNA_anti-codonPF01336.255.2e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSONIT00000016538-1848-ENSONIP00000016523615 (aa)-I3K5X8
Gene Model
Click here to download ENSONIG00000013135's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000013135's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSONIG00000013135rpa19963.813ENSONIG00000005602RPA19963.813
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSONIG00000013135rpa19270.136ENSAPOG00000019409RPA18870.136Acanthochromis_polyacanthus
ENSONIG00000013135rpa19986.786ENSAPOG00000011658rpa110086.786Acanthochromis_polyacanthus
ENSONIG00000013135rpa19962.885ENSAMEG00000007706RPA19962.885Ailuropoda_melanoleuca
ENSONIG00000013135rpa19562.585ENSACIG00000012881RPA19962.585Amphilophus_citrinellus
ENSONIG00000013135rpa19683.051ENSACIG00000007277rpa110083.051Amphilophus_citrinellus
ENSONIG00000013135rpa19987.765ENSAOCG00000023376rpa110087.765Amphiprion_ocellaris
ENSONIG00000013135rpa19958.642ENSAOCG00000009003RPA19958.669Amphiprion_ocellaris
ENSONIG00000013135rpa19987.765ENSAPEG00000008634rpa110087.765Amphiprion_percula
ENSONIG00000013135rpa19957.617ENSAPEG00000019132RPA19957.640Amphiprion_percula
ENSONIG00000013135rpa19960.433ENSATEG00000006443RPA19960.433Anabas_testudineus
ENSONIG00000013135rpa19585.911ENSATEG00000022024rpa19985.911Anabas_testudineus
ENSONIG00000013135rpa19855.605ENSAPLG00000012442RPA110055.900Anas_platyrhynchos
ENSONIG00000013135rpa19956.981ENSACAG00000014490RPA19857.861Anolis_carolinensis
ENSONIG00000013135rpa19664.214ENSANAG00000023456RPA19864.214Aotus_nancymaae
ENSONIG00000013135rpa19962.992ENSACLG00000005223RPA19962.992Astatotilapia_calliptera
ENSONIG00000013135rpa19492.548ENSACLG00000006640rpa110092.548Astatotilapia_calliptera
ENSONIG00000013135rpa19978.852ENSAMXG00000008418rpa19979.016Astyanax_mexicanus
ENSONIG00000013135rpa19962.885ENSBTAG00000009711RPA19962.885Bos_taurus
ENSONIG00000013135rpa19961.576ENSCJAG00000001848RPA19962.097Callithrix_jacchus
ENSONIG00000013135rpa19963.269ENSCAFG00000019249RPA19963.592Canis_familiaris
ENSONIG00000013135rpa19963.269ENSCAFG00020009847RPA19963.592Canis_lupus_dingo
ENSONIG00000013135rpa19963.005ENSCHIG00000026308RPA19963.371Capra_hircus
ENSONIG00000013135rpa19962.862ENSTSYG00000003482-9962.862Carlito_syrichta
ENSONIG00000013135rpa19963.651ENSCPOG00000000035RPA19963.651Cavia_porcellus
ENSONIG00000013135rpa19952.320ENSCCAG00000010981RPA19952.809Cebus_capucinus
ENSONIG00000013135rpa19959.385ENSCLAG00000015045-9959.385Chinchilla_lanigera
ENSONIG00000013135rpa19962.843ENSCLAG00000005185-9962.843Chinchilla_lanigera
ENSONIG00000013135rpa19953.698ENSCSAG00000013833RPA19953.698Chlorocebus_sabaeus
ENSONIG00000013135rpa19563.025ENSCHOG00000013540-9963.025Choloepus_hoffmanni
ENSONIG00000013135rpa17172.018ENSCHOG00000009454-9972.018Choloepus_hoffmanni
ENSONIG00000013135rpa19964.553ENSCPBG00000020377RPA19965.505Chrysemys_picta_bellii
ENSONIG00000013135rpa19944.118ENSCING00000023482-9944.118Ciona_intestinalis
ENSONIG00000013135rpa19862.914ENSCANG00000030911RPA19962.914Colobus_angolensis_palliatus
ENSONIG00000013135rpa19962.821ENSCGRG00001008197Rpa19963.607Cricetulus_griseus_chok1gshd
ENSONIG00000013135rpa18165.184ENSCGRG00000000582Rpa19966.148Cricetulus_griseus_crigri
ENSONIG00000013135rpa19979.612ENSCSEG00000013066rpa19979.612Cynoglossus_semilaevis
ENSONIG00000013135rpa19956.230ENSCSEG00000012726RPA19957.850Cynoglossus_semilaevis
ENSONIG00000013135rpa19984.304ENSCVAG00000019431rpa19984.466Cyprinodon_variegatus
ENSONIG00000013135rpa19557.543ENSCVAG00000013446-9657.543Cyprinodon_variegatus
ENSONIG00000013135rpa19976.557ENSDARG00000003938rpa19976.557Danio_rerio
ENSONIG00000013135rpa19863.666ENSDNOG00000017218RPA19863.666Dasypus_novemcinctus
ENSONIG00000013135rpa19963.754ENSDORG00000006199Rpa19963.651Dipodomys_ordii
ENSONIG00000013135rpa19940.777FBgn0010173RpA-709941.318Drosophila_melanogaster
ENSONIG00000013135rpa18274.227ENSETEG00000017608RPA18274.227Echinops_telfairi
ENSONIG00000013135rpa19763.036ENSEASG00005009372RPA19963.574Equus_asinus_asinus
ENSONIG00000013135rpa19963.328ENSECAG00000023886RPA19963.489Equus_caballus
ENSONIG00000013135rpa16871.599ENSEEUG00000002186-6871.599Erinaceus_europaeus
ENSONIG00000013135rpa18863.419ENSELUG00000006136RPA19963.419Esox_lucius
ENSONIG00000013135rpa19979.579ENSELUG00000021071rpa19979.579Esox_lucius
ENSONIG00000013135rpa19963.548ENSFCAG00000006306RPA19963.548Felis_catus
ENSONIG00000013135rpa19964.228ENSFALG00000006575RPA19964.228Ficedula_albicollis
ENSONIG00000013135rpa19964.274ENSFDAG00000007720RPA19964.274Fukomys_damarensis
ENSONIG00000013135rpa19984.176ENSFHEG00000003580rpa19984.176Fundulus_heteroclitus
ENSONIG00000013135rpa19975.369ENSGMOG00000010382rpa19975.369Gadus_morhua
ENSONIG00000013135rpa19963.889ENSGALG00000003072RPA19963.889Gallus_gallus
ENSONIG00000013135rpa19959.847ENSGAFG00000020953RPA19958.459Gambusia_affinis
ENSONIG00000013135rpa19984.150ENSGAFG00000012916rpa19984.150Gambusia_affinis
ENSONIG00000013135rpa19982.871ENSGACG00000010856rpa19982.871Gasterosteus_aculeatus
ENSONIG00000013135rpa19963.857ENSGAGG00000013611RPA19963.857Gopherus_agassizii
ENSONIG00000013135rpa19962.806ENSGGOG00000014186RPA19962.806Gorilla_gorilla
ENSONIG00000013135rpa19996.254ENSHBUG00000017773rpa110096.254Haplochromis_burtoni
ENSONIG00000013135rpa19557.095ENSHBUG00000009348RPA19857.095Haplochromis_burtoni
ENSONIG00000013135rpa19963.622ENSHGLG00000008846RPA19963.622Heterocephalus_glaber_female
ENSONIG00000013135rpa19954.323ENSHGLG00100002005-9954.323Heterocephalus_glaber_male
ENSONIG00000013135rpa19958.966ENSHGLG00100000799-9958.966Heterocephalus_glaber_male
ENSONIG00000013135rpa19963.622ENSHGLG00100017755-9963.622Heterocephalus_glaber_male
ENSONIG00000013135rpa19975.122ENSHCOG00000001401rpa19975.447Hippocampus_comes
ENSONIG00000013135rpa19944.318ENSHCOG00000000351RPA19943.891Hippocampus_comes
ENSONIG00000013135rpa19977.147ENSIPUG00000004400rpa19977.147Ictalurus_punctatus
ENSONIG00000013135rpa19162.783ENSSTOG00000022475RPA19562.783Ictidomys_tridecemlineatus
ENSONIG00000013135rpa19664.975ENSJJAG00000000876Rpa19864.975Jaculus_jaculus
ENSONIG00000013135rpa19960.196ENSKMAG00000000234RPA19960.196Kryptolebias_marmoratus
ENSONIG00000013135rpa19981.220ENSKMAG00000005605rpa19981.380Kryptolebias_marmoratus
ENSONIG00000013135rpa19870.872ENSLBEG00000002281RPA18670.872Labrus_bergylta
ENSONIG00000013135rpa19984.365ENSLBEG00000021604rpa110084.365Labrus_bergylta
ENSONIG00000013135rpa18062.424ENSLACG00000007210RPA19962.424Latimeria_chalumnae
ENSONIG00000013135rpa19973.008ENSLOCG00000006397rpa19973.290Lepisosteus_oculatus
ENSONIG00000013135rpa19962.300ENSLAFG00000015354RPA19962.300Loxodonta_africana
ENSONIG00000013135rpa18260.588ENSMFAG00000036138-9961.057Macaca_fascicularis
ENSONIG00000013135rpa19863.322ENSMMUG00000011604-9963.875Macaca_mulatta
ENSONIG00000013135rpa19959.091ENSMMUG00000002442-9959.091Macaca_mulatta
ENSONIG00000013135rpa18964.948ENSMNEG00000029837-9964.948Macaca_nemestrina
ENSONIG00000013135rpa19663.529ENSMNEG00000031632-9864.094Macaca_nemestrina
ENSONIG00000013135rpa19859.902ENSMLEG00000038768-9960.393Mandrillus_leucophaeus
ENSONIG00000013135rpa19957.871ENSMAMG00000020097RPA19957.997Mastacembelus_armatus
ENSONIG00000013135rpa19987.908ENSMAMG00000017993rpa19987.908Mastacembelus_armatus
ENSONIG00000013135rpa19996.580ENSMZEG00005007551rpa110096.580Maylandia_zebra
ENSONIG00000013135rpa19962.992ENSMZEG00005024731RPA19962.992Maylandia_zebra
ENSONIG00000013135rpa19863.322ENSMGAG00000005315RPA19863.322Meleagris_gallopavo
ENSONIG00000013135rpa19763.279ENSMAUG00000010474Rpa19963.279Mesocricetus_auratus
ENSONIG00000013135rpa19963.754ENSMICG00000012867RPA19963.754Microcebus_murinus
ENSONIG00000013135rpa19963.005ENSMOCG00000013019Rpa19963.005Microtus_ochrogaster
ENSONIG00000013135rpa19862.521ENSMMOG00000010868RPA19869.725Mola_mola
ENSONIG00000013135rpa19982.843ENSMMOG00000014292rpa19984.966Mola_mola
ENSONIG00000013135rpa19962.419ENSMODG00000010549RPA19962.419Monodelphis_domestica
ENSONIG00000013135rpa19971.854ENSMALG00000001208RPA18671.854Monopterus_albus
ENSONIG00000013135rpa19987.745ENSMALG00000011453rpa19987.745Monopterus_albus
ENSONIG00000013135rpa19963.430MGP_CAROLIEiJ_G0016734Rpa19963.533Mus_caroli
ENSONIG00000013135rpa19962.821ENSMUSG00000000751Rpa19963.082Mus_musculus
ENSONIG00000013135rpa19963.607MGP_PahariEiJ_G0017871Rpa19963.871Mus_pahari
ENSONIG00000013135rpa19962.720MGP_SPRETEiJ_G0017577Rpa19962.981Mus_spretus
ENSONIG00000013135rpa19964.019ENSMPUG00000013119RPA19964.019Mustela_putorius_furo
ENSONIG00000013135rpa19962.400ENSMLUG00000006113RPA19962.400Myotis_lucifugus
ENSONIG00000013135rpa19664.060ENSNGAG00000004522Rpa19564.060Nannospalax_galili
ENSONIG00000013135rpa19859.508ENSNBRG00000009672RPA19759.508Neolamprologus_brichardi
ENSONIG00000013135rpa19592.624ENSNBRG00000020595rpa110092.624Neolamprologus_brichardi
ENSONIG00000013135rpa19963.505ENSNLEG00000017149RPA19963.489Nomascus_leucogenys
ENSONIG00000013135rpa19654.667ENSMEUG00000006714RPA19754.667Notamacropus_eugenii
ENSONIG00000013135rpa19663.773ENSODEG00000009038RPA19763.773Octodon_degus
ENSONIG00000013135rpa19863.934ENSOANG00000010880RPA19963.934Ornithorhynchus_anatinus
ENSONIG00000013135rpa19961.515ENSOCUG00000001504RPA19961.515Oryctolagus_cuniculus
ENSONIG00000013135rpa19983.961ENSORLG00000004856rpa19983.961Oryzias_latipes
ENSONIG00000013135rpa19957.846ENSORLG00000003368RPA19957.846Oryzias_latipes
ENSONIG00000013135rpa19984.124ENSORLG00020008980rpa19984.124Oryzias_latipes_hni
ENSONIG00000013135rpa19956.344ENSORLG00020015284RPA19956.344Oryzias_latipes_hni
ENSONIG00000013135rpa19958.190ENSORLG00015020383RPA19958.190Oryzias_latipes_hsok
ENSONIG00000013135rpa19984.124ENSORLG00015013982rpa19984.124Oryzias_latipes_hsok
ENSONIG00000013135rpa17065.589ENSORLG00015005867-9865.589Oryzias_latipes_hsok
ENSONIG00000013135rpa19856.752ENSOMEG00000011040RPA19958.390Oryzias_melastigma
ENSONIG00000013135rpa19980.524ENSOMEG00000004704rpa19980.524Oryzias_melastigma
ENSONIG00000013135rpa17575.824ENSOGAG00000029379-9875.824Otolemur_garnettii
ENSONIG00000013135rpa19963.065ENSOGAG00000005581-9963.065Otolemur_garnettii
ENSONIG00000013135rpa19963.005ENSOARG00000014479RPA19963.371Ovis_aries
ENSONIG00000013135rpa19963.344ENSPPAG00000039680RPA19963.328Pan_paniscus
ENSONIG00000013135rpa19963.387ENSPPRG00000011807RPA19963.387Panthera_pardus
ENSONIG00000013135rpa19963.387ENSPTIG00000007898RPA19963.387Panthera_tigris_altaica
ENSONIG00000013135rpa19963.666ENSPTRG00000008539RPA19963.651Pan_troglodytes
ENSONIG00000013135rpa19963.107ENSPANG00000024592RPA19963.489Papio_anubis
ENSONIG00000013135rpa19973.864ENSPKIG00000008053rpa19874.351Paramormyrops_kingsleyae
ENSONIG00000013135rpa19664.706ENSPSIG00000015617RPA19864.706Pelodiscus_sinensis
ENSONIG00000013135rpa19980.033ENSPMGG00000011589rpa19980.033Periophthalmus_magnuspinnatus
ENSONIG00000013135rpa19957.395ENSPMGG00000000543RPA19961.754Periophthalmus_magnuspinnatus
ENSONIG00000013135rpa19963.902ENSPEMG00000021061Rpa19963.902Peromyscus_maniculatus_bairdii
ENSONIG00000013135rpa19962.197ENSPCIG00000019049RPA19962.158Phascolarctos_cinereus
ENSONIG00000013135rpa19985.131ENSPFOG00000003987rpa19985.131Poecilia_formosa
ENSONIG00000013135rpa19459.157ENSPLAG00000008844-9659.157Poecilia_latipinna
ENSONIG00000013135rpa19984.967ENSPLAG00000004984rpa19984.967Poecilia_latipinna
ENSONIG00000013135rpa19985.294ENSPMEG00000020602rpa19985.294Poecilia_mexicana
ENSONIG00000013135rpa19458.347ENSPMEG00000003627-9658.013Poecilia_mexicana
ENSONIG00000013135rpa19958.271ENSPREG00000010119RPA19957.675Poecilia_reticulata
ENSONIG00000013135rpa19377.193ENSPREG00000010174rpa19577.058Poecilia_reticulata
ENSONIG00000013135rpa19963.387ENSPCOG00000001799RPA19963.387Propithecus_coquereli
ENSONIG00000013135rpa19962.158ENSPVAG00000002149RPA19962.158Pteropus_vampyrus
ENSONIG00000013135rpa19996.580ENSPNYG00000016316rpa110096.580Pundamilia_nyererei
ENSONIG00000013135rpa19962.205ENSPNYG00000024165RPA19962.205Pundamilia_nyererei
ENSONIG00000013135rpa19869.522ENSPNAG00000008599rpa19671.698Pygocentrus_nattereri
ENSONIG00000013135rpa19770.874ENSRNOG00000003123Rpa19963.974Rattus_norvegicus
ENSONIG00000013135rpa19962.963ENSRBIG00000036587RPA19962.963Rhinopithecus_bieti
ENSONIG00000013135rpa19958.132ENSRROG00000043278RPA19958.132Rhinopithecus_roxellana
ENSONIG00000013135rpa19431.864YAR007CRFA19331.864Saccharomyces_cerevisiae
ENSONIG00000013135rpa19164.613ENSSBOG00000030233RPA19764.965Saimiri_boliviensis_boliviensis
ENSONIG00000013135rpa19962.075ENSSHAG00000007969RPA19863.132Sarcophilus_harrisii
ENSONIG00000013135rpa19980.619ENSSFOG00015005362rpa19280.619Scleropages_formosus
ENSONIG00000013135rpa19958.143ENSSMAG00000019746RPA19957.839Scophthalmus_maximus
ENSONIG00000013135rpa19072.454ENSSDUG00000016358RPA19172.146Seriola_dumerili
ENSONIG00000013135rpa19988.562ENSSDUG00000011949rpa19988.562Seriola_dumerili
ENSONIG00000013135rpa19988.889ENSSLDG00000011806rpa19988.889Seriola_lalandi_dorsalis
ENSONIG00000013135rpa19071.759ENSSLDG00000020784RPA18271.461Seriola_lalandi_dorsalis
ENSONIG00000013135rpa18778.788ENSSARG00000007506RPA18978.788Sorex_araneus
ENSONIG00000013135rpa19663.484ENSSPUG00000007223RPA19863.484Sphenodon_punctatus
ENSONIG00000013135rpa19989.052ENSSPAG00000009903rpa19989.052Stegastes_partitus
ENSONIG00000013135rpa19863.201ENSSPAG00000011165RPA19963.201Stegastes_partitus
ENSONIG00000013135rpa19962.316ENSSSCG00000017822RPA19963.651Sus_scrofa
ENSONIG00000013135rpa19963.948ENSTGUG00000005775RPA19963.948Taeniopygia_guttata
ENSONIG00000013135rpa19982.353ENSTRUG00000003616rpa19982.353Takifugu_rubripes
ENSONIG00000013135rpa19971.028ENSTRUG00000000405RPA18670.642Takifugu_rubripes
ENSONIG00000013135rpa19985.644ENSTNIG00000016199rpa19985.808Tetraodon_nigroviridis
ENSONIG00000013135rpa17171.818ENSTBEG00000002709RPA17471.818Tupaia_belangeri
ENSONIG00000013135rpa19962.075ENSTTRG00000001169RPA19962.723Tursiops_truncatus
ENSONIG00000013135rpa19668.085ENSUAMG00000015676RPA19775.000Ursus_americanus
ENSONIG00000013135rpa19962.885ENSUMAG00000009328RPA19963.107Ursus_maritimus
ENSONIG00000013135rpa19962.069ENSVPAG00000009443RPA19962.069Vicugna_pacos
ENSONIG00000013135rpa19962.908ENSVVUG00000021715RPA19963.235Vulpes_vulpes
ENSONIG00000013135rpa19967.647ENSXETG00000013538rpa19967.647Xenopus_tropicalis
ENSONIG00000013135rpa19561.604ENSXCOG00000009899-9961.604Xiphophorus_couchianus
ENSONIG00000013135rpa19383.538ENSXCOG00000010068rpa19483.538Xiphophorus_couchianus
ENSONIG00000013135rpa19171.625ENSXMAG00000010333RPA18571.625Xiphophorus_maculatus
ENSONIG00000013135rpa19983.333ENSXMAG00000004102rpa19984.211Xiphophorus_maculatus

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