EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000013160 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 2865 bases
Position: chrGL831141.1:8601882-8604746
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000016552	RRM_1	PF00076.22	2.4e-32	1	2
ENSONIP00000016552	RRM_1	PF00076.22	2.4e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000016567	-	741	-	ENSONIP00000016552	246 (aa)	-	I3K607

Gene Model

Click here to download ENSONIG00000013160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000013160's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000013160	-	66	42.857	ENSONIG00000019583	srsf5a	60	41.758
ENSONIG00000013160	-	73	70.391	ENSONIG00000013974	srsf9	74	72.067
ENSONIG00000013160	-	77	83.168	ENSONIG00000004857	-	80	84.653
ENSONIG00000013160	-	64	43.333	ENSONIG00000005759	srsf5b	57	41.209
ENSONIG00000013160	-	78	91.282	ENSONIG00000004860	-	79	90.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000013160	-	98	84.774	ENSG00000136450	SRSF1	95	91.935	Homo_sapiens
ENSONIG00000013160	-	77	88.947	ENSAPOG00000008542	-	80	87.940	Acanthochromis_polyacanthus
ENSONIG00000013160	-	99	99.184	ENSAPOG00000002748	-	100	99.184	Acanthochromis_polyacanthus
ENSONIG00000013160	-	77	88.421	ENSAMEG00000002635	SRSF1	77	90.000	Ailuropoda_melanoleuca
ENSONIG00000013160	-	99	93.852	ENSACIG00000008091	srsf1a	100	93.852	Amphilophus_citrinellus
ENSONIG00000013160	-	77	87.940	ENSAOCG00000000337	-	80	87.940	Amphiprion_ocellaris
ENSONIG00000013160	-	99	99.592	ENSAOCG00000010671	-	100	99.592	Amphiprion_ocellaris
ENSONIG00000013160	-	77	87.940	ENSAPEG00000023352	-	79	87.940	Amphiprion_percula
ENSONIG00000013160	-	99	99.592	ENSAPEG00000009915	-	100	99.592	Amphiprion_percula
ENSONIG00000013160	-	80	87.817	ENSATEG00000021567	-	80	89.529	Anabas_testudineus
ENSONIG00000013160	-	99	98.785	ENSATEG00000022403	-	100	98.785	Anabas_testudineus
ENSONIG00000013160	-	77	88.601	ENSACAG00000005542	-	78	90.674	Anolis_carolinensis
ENSONIG00000013160	-	78	66.839	ENSANAG00000025417	-	73	67.895	Aotus_nancymaae
ENSONIG00000013160	-	98	84.774	ENSANAG00000020583	-	93	91.176	Aotus_nancymaae
ENSONIG00000013160	-	94	80.335	ENSAMXG00000035996	srsf1a	79	88.384	Astyanax_mexicanus
ENSONIG00000013160	-	53	72.903	ENSAMXG00000024373	-	72	76.774	Astyanax_mexicanus
ENSONIG00000013160	-	98	84.774	ENSBTAG00000014766	SRSF1	78	91.710	Bos_taurus
ENSONIG00000013160	-	98	84.774	ENSCJAG00000041713	-	93	91.176	Callithrix_jacchus
ENSONIG00000013160	-	77	82.383	ENSCJAG00000008111	-	86	83.420	Callithrix_jacchus
ENSONIG00000013160	-	98	84.774	ENSCAFG00000017430	SRSF1	76	91.710	Canis_familiaris
ENSONIG00000013160	-	98	84.774	ENSCAFG00020025632	-	76	91.710	Canis_lupus_dingo
ENSONIG00000013160	-	77	89.637	ENSCHIG00000010787	SRSF1	78	91.710	Capra_hircus
ENSONIG00000013160	-	98	84.774	ENSTSYG00000013899	-	93	91.176	Carlito_syrichta
ENSONIG00000013160	-	98	84.774	ENSCPOG00000032681	-	78	91.710	Cavia_porcellus
ENSONIG00000013160	-	98	84.774	ENSCCAG00000029484	-	93	91.176	Cebus_capucinus
ENSONIG00000013160	-	98	84.774	ENSCATG00000042294	-	93	91.176	Cercocebus_atys
ENSONIG00000013160	-	98	84.774	ENSCLAG00000014707	-	78	91.710	Chinchilla_lanigera
ENSONIG00000013160	-	98	83.951	ENSCSAG00000005642	-	76	90.674	Chlorocebus_sabaeus
ENSONIG00000013160	-	77	89.637	ENSCHOG00000001899	SRSF1	78	91.710	Choloepus_hoffmanni
ENSONIG00000013160	-	98	84.362	ENSCPBG00000009851	-	78	91.192	Chrysemys_picta_bellii
ENSONIG00000013160	-	98	84.774	ENSCANG00000029726	-	93	91.176	Colobus_angolensis_palliatus
ENSONIG00000013160	-	98	84.774	ENSCGRG00001000670	Srsf1	76	91.710	Cricetulus_griseus_chok1gshd
ENSONIG00000013160	-	98	84.774	ENSCGRG00000005590	Srsf1	78	91.710	Cricetulus_griseus_crigri
ENSONIG00000013160	-	77	81.731	ENSCSEG00000009973	-	79	81.731	Cynoglossus_semilaevis
ENSONIG00000013160	-	99	91.020	ENSCSEG00000014272	-	100	91.020	Cynoglossus_semilaevis
ENSONIG00000013160	-	99	99.184	ENSCVAG00000018617	-	100	99.184	Cyprinodon_variegatus
ENSONIG00000013160	-	77	86.598	ENSCVAG00000005458	-	90	86.264	Cyprinodon_variegatus
ENSONIG00000013160	-	77	84.236	ENSDARG00000057691	srsf1a	99	85.340	Danio_rerio
ENSONIG00000013160	-	77	89.119	ENSDARG00000017843	srsf1b	79	91.710	Danio_rerio
ENSONIG00000013160	-	98	84.774	ENSDNOG00000011737	-	76	91.710	Dasypus_novemcinctus
ENSONIG00000013160	-	98	84.774	ENSDORG00000015082	Srsf1	78	91.710	Dipodomys_ordii
ENSONIG00000013160	-	72	88.889	ENSETEG00000005349	-	62	89.444	Echinops_telfairi
ENSONIG00000013160	-	98	84.774	ENSEASG00005002922	-	76	91.710	Equus_asinus_asinus
ENSONIG00000013160	-	77	89.637	ENSECAG00000016654	SRSF1	78	91.710	Equus_caballus
ENSONIG00000013160	-	72	90.000	ENSEEUG00000009255	-	62	90.556	Erinaceus_europaeus
ENSONIG00000013160	-	98	93.574	ENSELUG00000021646	srsf1a	99	93.574	Esox_lucius
ENSONIG00000013160	-	98	84.774	ENSFCAG00000002250	-	90	90.055	Felis_catus
ENSONIG00000013160	-	77	94.340	ENSFALG00000005062	-	76	73.057	Ficedula_albicollis
ENSONIG00000013160	-	98	84.774	ENSFDAG00000010646	-	78	91.710	Fukomys_damarensis
ENSONIG00000013160	-	99	98.776	ENSFHEG00000003174	srsf1a	100	98.776	Fundulus_heteroclitus
ENSONIG00000013160	-	79	89.744	ENSGMOG00000014787	-	80	88.947	Gadus_morhua
ENSONIG00000013160	-	77	89.119	ENSGALG00000005525	SRSF1	78	91.192	Gallus_gallus
ENSONIG00000013160	-	77	86.842	ENSGACG00000020621	srsf1b	78	86.316	Gasterosteus_aculeatus
ENSONIG00000013160	-	98	84.362	ENSGAGG00000022965	-	76	91.192	Gopherus_agassizii
ENSONIG00000013160	-	98	84.774	ENSGGOG00000004386	SRSF1	93	91.176	Gorilla_gorilla
ENSONIG00000013160	-	99	100.000	ENSHBUG00000016788	srsf1a	100	100.000	Haplochromis_burtoni
ENSONIG00000013160	-	65	89.024	ENSHGLG00000000600	-	76	91.463	Heterocephalus_glaber_female
ENSONIG00000013160	-	65	89.024	ENSHGLG00000000669	-	76	91.463	Heterocephalus_glaber_female
ENSONIG00000013160	-	98	84.774	ENSHGLG00100016906	-	78	91.710	Heterocephalus_glaber_male
ENSONIG00000013160	-	78	89.500	ENSHCOG00000018918	srsf1a	78	91.457	Hippocampus_comes
ENSONIG00000013160	-	78	86.070	ENSIPUG00000017039	srsf1a	80	88.060	Ictalurus_punctatus
ENSONIG00000013160	-	77	90.625	ENSIPUG00000008750	srsf1b	80	90.256	Ictalurus_punctatus
ENSONIG00000013160	-	98	84.774	ENSSTOG00000000243	-	96	86.010	Ictidomys_tridecemlineatus
ENSONIG00000013160	-	98	84.774	ENSJJAG00000000102	-	78	91.710	Jaculus_jaculus
ENSONIG00000013160	-	99	97.967	ENSKMAG00000019232	srsf1a	100	97.967	Kryptolebias_marmoratus
ENSONIG00000013160	-	99	98.776	ENSLBEG00000020864	-	100	98.776	Labrus_bergylta
ENSONIG00000013160	-	77	79.592	ENSLBEG00000015294	-	79	81.122	Labrus_bergylta
ENSONIG00000013160	-	77	88.542	ENSLACG00000014160	srsf1a	72	88.542	Latimeria_chalumnae
ENSONIG00000013160	-	77	89.583	ENSLOCG00000005994	srsf1a	78	91.667	Lepisosteus_oculatus
ENSONIG00000013160	-	77	89.637	ENSLAFG00000025743	SRSF1	78	91.710	Loxodonta_africana
ENSONIG00000013160	-	98	84.774	ENSMFAG00000040003	-	93	91.176	Macaca_fascicularis
ENSONIG00000013160	-	98	81.557	ENSMMUG00000003260	-	93	89.062	Macaca_mulatta
ENSONIG00000013160	-	98	84.774	ENSMMUG00000004725	SRSF1	93	91.176	Macaca_mulatta
ENSONIG00000013160	-	98	81.967	ENSMNEG00000015983	-	76	89.119	Macaca_nemestrina
ENSONIG00000013160	-	98	84.774	ENSMNEG00000027680	-	93	91.176	Macaca_nemestrina
ENSONIG00000013160	-	98	82.988	ENSMLEG00000015243	-	76	87.895	Mandrillus_leucophaeus
ENSONIG00000013160	-	77	89.637	ENSMLEG00000040509	SRSF1	78	91.710	Mandrillus_leucophaeus
ENSONIG00000013160	-	99	99.592	ENSMAMG00000018454	-	100	99.592	Mastacembelus_armatus
ENSONIG00000013160	-	77	90.526	ENSMAMG00000019687	-	78	90.526	Mastacembelus_armatus
ENSONIG00000013160	-	77	92.188	ENSMAMG00000019691	-	80	91.667	Mastacembelus_armatus
ENSONIG00000013160	-	98	84.774	ENSMAUG00000021845	Srsf1	78	91.710	Mesocricetus_auratus
ENSONIG00000013160	-	98	84.774	ENSMICG00000013639	-	93	91.176	Microcebus_murinus
ENSONIG00000013160	-	98	84.774	ENSMOCG00000001996	Srsf1	78	91.710	Microtus_ochrogaster
ENSONIG00000013160	-	99	92.653	ENSMMOG00000014354	srsf1a	100	92.653	Mola_mola
ENSONIG00000013160	-	72	91.160	ENSMODG00000014781	-	62	92.265	Monodelphis_domestica
ENSONIG00000013160	-	80	78.680	ENSMALG00000007763	-	77	82.632	Monopterus_albus
ENSONIG00000013160	-	78	97.927	ENSMALG00000017129	-	76	98.446	Monopterus_albus
ENSONIG00000013160	-	98	84.774	MGP_CAROLIEiJ_G0016943	Srsf1	90	90.055	Mus_caroli
ENSONIG00000013160	-	98	84.774	ENSMUSG00000018379	Srsf1	90	90.055	Mus_musculus
ENSONIG00000013160	-	98	84.774	MGP_PahariEiJ_G0018074	Srsf1	74	97.436	Mus_pahari
ENSONIG00000013160	-	98	84.774	MGP_SPRETEiJ_G0017790	Srsf1	90	90.055	Mus_spretus
ENSONIG00000013160	-	77	89.637	ENSMPUG00000015369	SRSF1	78	91.710	Mustela_putorius_furo
ENSONIG00000013160	-	77	89.637	ENSMLUG00000011040	SRSF1	78	91.710	Myotis_lucifugus
ENSONIG00000013160	-	80	88.265	ENSMLUG00000023995	-	77	87.895	Myotis_lucifugus
ENSONIG00000013160	-	77	89.637	ENSNGAG00000011395	Srsf1	78	91.710	Nannospalax_galili
ENSONIG00000013160	-	98	74.590	ENSNBRG00000008041	srsf1b	78	77.895	Neolamprologus_brichardi
ENSONIG00000013160	-	98	84.774	ENSNLEG00000008088	-	93	91.176	Nomascus_leucogenys
ENSONIG00000013160	-	52	87.879	ENSOPRG00000001234	-	72	90.909	Ochotona_princeps
ENSONIG00000013160	-	98	84.774	ENSODEG00000011481	-	78	91.710	Octodon_degus
ENSONIG00000013160	-	98	64.082	ENSOCUG00000010894	-	75	72.872	Oryctolagus_cuniculus
ENSONIG00000013160	-	99	99.592	ENSORLG00000004580	srsf1a	100	99.592	Oryzias_latipes
ENSONIG00000013160	-	99	99.592	ENSORLG00020009456	srsf1a	100	99.592	Oryzias_latipes_hni
ENSONIG00000013160	-	99	99.184	ENSORLG00015014384	srsf1a	100	99.184	Oryzias_latipes_hsok
ENSONIG00000013160	-	91	97.788	ENSOMEG00000004106	srsf1a	93	97.788	Oryzias_melastigma
ENSONIG00000013160	-	82	90.196	ENSOGAG00000025950	-	78	91.710	Otolemur_garnettii
ENSONIG00000013160	-	77	89.474	ENSOARG00000008323	SRSF1	77	89.474	Ovis_aries
ENSONIG00000013160	-	98	84.774	ENSPPAG00000043403	-	93	91.176	Pan_paniscus
ENSONIG00000013160	-	98	84.774	ENSPPRG00000004238	-	90	90.055	Panthera_pardus
ENSONIG00000013160	-	98	84.774	ENSPTRG00000049077	SRSF1	93	91.176	Pan_troglodytes
ENSONIG00000013160	-	98	84.774	ENSPANG00000022305	-	93	91.176	Papio_anubis
ENSONIG00000013160	-	98	68.033	ENSPANG00000030275	-	75	68.394	Papio_anubis
ENSONIG00000013160	-	78	88.542	ENSPKIG00000007204	srsf1a	83	91.146	Paramormyrops_kingsleyae
ENSONIG00000013160	-	78	88.832	ENSPKIG00000012857	srsf1b	78	91.667	Paramormyrops_kingsleyae
ENSONIG00000013160	-	77	81.865	ENSPSIG00000009000	-	72	90.226	Pelodiscus_sinensis
ENSONIG00000013160	-	96	83.475	ENSPMGG00000005467	-	79	88.601	Periophthalmus_magnuspinnatus
ENSONIG00000013160	-	99	96.032	ENSPMGG00000013112	-	100	96.032	Periophthalmus_magnuspinnatus
ENSONIG00000013160	-	98	84.774	ENSPEMG00000021416	Srsf1	78	91.710	Peromyscus_maniculatus_bairdii
ENSONIG00000013160	-	77	90.206	ENSPCIG00000006076	-	78	91.753	Phascolarctos_cinereus
ENSONIG00000013160	-	78	86.802	ENSPFOG00000018325	-	69	87.047	Poecilia_formosa
ENSONIG00000013160	-	78	86.802	ENSPLAG00000008416	srsf1b	78	87.047	Poecilia_latipinna
ENSONIG00000013160	-	50	98.374	ENSPMEG00000020607	-	99	98.374	Poecilia_mexicana
ENSONIG00000013160	-	50	98.374	ENSPMEG00000014312	-	99	98.374	Poecilia_mexicana
ENSONIG00000013160	-	78	86.802	ENSPMEG00000002388	-	78	87.047	Poecilia_mexicana
ENSONIG00000013160	-	99	99.184	ENSPREG00000009667	srsf1a	100	99.184	Poecilia_reticulata
ENSONIG00000013160	-	98	84.774	ENSPPYG00000008240	SRSF1	78	91.710	Pongo_abelii
ENSONIG00000013160	-	77	89.637	ENSPCAG00000005199	SRSF1	78	91.710	Procavia_capensis
ENSONIG00000013160	-	78	73.232	ENSPCOG00000025736	-	93	73.684	Propithecus_coquereli
ENSONIG00000013160	-	98	84.774	ENSPCOG00000023654	-	93	91.176	Propithecus_coquereli
ENSONIG00000013160	-	53	97.143	ENSPVAG00000000519	-	53	97.143	Pteropus_vampyrus
ENSONIG00000013160	-	77	92.105	ENSPNAG00000014601	srsf1b	78	91.579	Pygocentrus_nattereri
ENSONIG00000013160	-	94	83.983	ENSPNAG00000022241	srsf1a	78	91.053	Pygocentrus_nattereri
ENSONIG00000013160	-	77	89.637	ENSRNOG00000050323	Srsf1	78	91.710	Rattus_norvegicus
ENSONIG00000013160	-	98	84.774	ENSRBIG00000034445	-	93	91.176	Rhinopithecus_bieti
ENSONIG00000013160	-	98	84.774	ENSRROG00000041506	-	93	91.176	Rhinopithecus_roxellana
ENSONIG00000013160	-	98	84.774	ENSSBOG00000025377	-	93	91.176	Saimiri_boliviensis_boliviensis
ENSONIG00000013160	-	77	90.206	ENSSHAG00000002552	-	78	91.753	Sarcophilus_harrisii
ENSONIG00000013160	-	77	91.623	ENSSFOG00015004800	srsf1a	79	90.256	Scleropages_formosus
ENSONIG00000013160	-	99	97.551	ENSSMAG00000007018	-	100	97.551	Scophthalmus_maximus
ENSONIG00000013160	-	77	85.000	ENSSMAG00000009719	-	78	85.000	Scophthalmus_maximus
ENSONIG00000013160	-	99	72.000	ENSSDUG00000003929	-	83	78.894	Seriola_dumerili
ENSONIG00000013160	-	99	98.776	ENSSDUG00000011303	-	100	98.776	Seriola_dumerili
ENSONIG00000013160	-	77	81.579	ENSSLDG00000016868	-	76	79.058	Seriola_lalandi_dorsalis
ENSONIG00000013160	-	99	98.776	ENSSLDG00000010543	-	100	98.776	Seriola_lalandi_dorsalis
ENSONIG00000013160	-	74	80.645	ENSSLDG00000016895	-	78	82.703	Seriola_lalandi_dorsalis
ENSONIG00000013160	-	72	90.000	ENSSARG00000010949	-	62	90.556	Sorex_araneus
ENSONIG00000013160	-	98	84.362	ENSSPUG00000000804	-	91	89.503	Sphenodon_punctatus
ENSONIG00000013160	-	99	99.187	ENSSPAG00000022562	-	100	99.187	Stegastes_partitus
ENSONIG00000013160	-	78	84.466	ENSSPAG00000014152	-	80	84.466	Stegastes_partitus
ENSONIG00000013160	-	98	84.774	ENSSSCG00000017626	-	78	91.710	Sus_scrofa
ENSONIG00000013160	-	53	87.218	ENSTGUG00000008416	-	72	90.226	Taeniopygia_guttata
ENSONIG00000013160	-	99	98.776	ENSTRUG00000003691	srsf1a	100	98.776	Takifugu_rubripes
ENSONIG00000013160	-	100	98.785	ENSTNIG00000016223	srsf1a	100	98.785	Tetraodon_nigroviridis
ENSONIG00000013160	-	72	87.778	ENSTBEG00000015378	-	62	90.556	Tupaia_belangeri
ENSONIG00000013160	-	52	87.879	ENSTTRG00000007310	SRSF1	72	90.909	Tursiops_truncatus
ENSONIG00000013160	-	77	89.637	ENSUAMG00000009858	SRSF1	78	91.710	Ursus_americanus
ENSONIG00000013160	-	98	84.774	ENSUMAG00000000455	-	76	91.710	Ursus_maritimus
ENSONIG00000013160	-	77	89.119	ENSVPAG00000010094	SRSF1	78	91.192	Vicugna_pacos
ENSONIG00000013160	-	98	84.774	ENSVVUG00000011882	-	76	91.710	Vulpes_vulpes
ENSONIG00000013160	-	77	92.632	ENSXETG00000008954	srsf1	79	83.962	Xenopus_tropicalis
ENSONIG00000013160	-	99	99.184	ENSXMAG00000011766	srsf1a	100	99.184	Xiphophorus_maculatus