EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000013657 (Gene tree)
Gene ID: -
Gene Symbol: rif1
Alias: -
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 24386 bases
Position: chrGL831337.1:6449-30834
Accession: ZDB-GENE-030131-3406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000017180	Rif1_N	PF12231.8	9.6e-81	1	1
ENSONIP00000017181	Rif1_N	PF12231.8	1.2e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000017195	-	10782	-	ENSONIP00000017180	2127 (aa)	-	I3K7T5
ENSONIT00000017196	-	7017	-	ENSONIP00000017181	2339 (aa)	-	I3K7T6

Gene Model

Click here to download ENSONIG00000013657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000013657's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000013657	rif1	60	50.420	ENSG00000080345	RIF1	97	54.678	Homo_sapiens
ENSONIG00000013657	rif1	75	71.269	ENSAPOG00000011073	rif1	96	71.242	Acanthochromis_polyacanthus
ENSONIG00000013657	rif1	61	53.571	ENSAMEG00000008461	RIF1	65	53.571	Ailuropoda_melanoleuca
ENSONIG00000013657	rif1	96	83.759	ENSACIG00000017765	rif1	99	83.759	Amphilophus_citrinellus
ENSONIG00000013657	rif1	100	60.515	ENSAOCG00000017231	rif1	97	71.785	Amphiprion_ocellaris
ENSONIG00000013657	rif1	97	78.448	ENSAPEG00000013228	rif1	99	78.448	Amphiprion_percula
ENSONIG00000013657	rif1	100	69.193	ENSATEG00000022887	rif1	99	69.812	Anabas_testudineus
ENSONIG00000013657	rif1	56	53.306	ENSAPLG00000007092	RIF1	54	53.224	Anas_platyrhynchos
ENSONIG00000013657	rif1	67	49.261	ENSACAG00000003714	RIF1	54	49.728	Anolis_carolinensis
ENSONIG00000013657	rif1	60	50.606	ENSANAG00000024840	RIF1	63	45.041	Aotus_nancymaae
ENSONIG00000013657	rif1	70	58.739	ENSAMXG00000010910	rif1	63	64.583	Astyanax_mexicanus
ENSONIG00000013657	rif1	54	51.786	ENSBTAG00000021020	RIF1	52	51.786	Bos_taurus
ENSONIG00000013657	rif1	54	50.497	ENSCJAG00000003138	RIF1	63	45.716	Callithrix_jacchus
ENSONIG00000013657	rif1	72	63.415	ENSCAFG00000005670	RIF1	73	48.930	Canis_familiaris
ENSONIG00000013657	rif1	62	51.786	ENSCHIG00000020327	RIF1	76	48.171	Capra_hircus
ENSONIG00000013657	rif1	60	46.345	ENSTSYG00000008861	RIF1	64	49.240	Carlito_syrichta
ENSONIG00000013657	rif1	55	42.202	ENSCAPG00000008957	RIF1	64	42.202	Cavia_aperea
ENSONIG00000013657	rif1	56	49.304	ENSCPOG00000037898	RIF1	51	49.054	Cavia_porcellus
ENSONIG00000013657	rif1	60	48.176	ENSCCAG00000024760	RIF1	63	43.939	Cebus_capucinus
ENSONIG00000013657	rif1	52	51.268	ENSCATG00000033353	RIF1	51	51.426	Cercocebus_atys
ENSONIG00000013657	rif1	67	49.030	ENSCLAG00000001517	RIF1	67	49.068	Chinchilla_lanigera
ENSONIG00000013657	rif1	60	50.644	ENSCSAG00000016089	RIF1	65	50.727	Chlorocebus_sabaeus
ENSONIG00000013657	rif1	56	50.667	ENSCHOG00000007187	RIF1	59	50.667	Choloepus_hoffmanni
ENSONIG00000013657	rif1	68	51.766	ENSCPBG00000025885	RIF1	73	52.045	Chrysemys_picta_bellii
ENSONIG00000013657	rif1	63	49.274	ENSCANG00000028962	RIF1	65	46.198	Colobus_angolensis_palliatus
ENSONIG00000013657	rif1	63	47.585	ENSCGRG00001024589	Rif1	69	48.705	Cricetulus_griseus_chok1gshd
ENSONIG00000013657	rif1	61	49.073	ENSCGRG00000010713	Rif1	68	50.038	Cricetulus_griseus_crigri
ENSONIG00000013657	rif1	97	59.185	ENSCSEG00000003945	rif1	74	63.615	Cynoglossus_semilaevis
ENSONIG00000013657	rif1	100	60.891	ENSCVAG00000022479	rif1	99	59.878	Cyprinodon_variegatus
ENSONIG00000013657	rif1	66	58.298	ENSDARG00000062650	rif1	58	58.386	Danio_rerio
ENSONIG00000013657	rif1	63	53.448	ENSDNOG00000011194	RIF1	84	44.360	Dasypus_novemcinctus
ENSONIG00000013657	rif1	68	46.249	ENSETEG00000012421	RIF1	62	51.481	Echinops_telfairi
ENSONIG00000013657	rif1	58	68.750	ENSEASG00005023434	RIF1	59	68.750	Equus_asinus_asinus
ENSONIG00000013657	rif1	63	59.607	ENSECAG00000012679	RIF1	62	59.607	Equus_caballus
ENSONIG00000013657	rif1	70	65.537	ENSELUG00000006826	rif1	68	65.537	Esox_lucius
ENSONIG00000013657	rif1	61	63.415	ENSFCAG00000029742	RIF1	64	50.743	Felis_catus
ENSONIG00000013657	rif1	56	48.341	ENSFALG00000013874	RIF1	51	53.475	Ficedula_albicollis
ENSONIG00000013657	rif1	69	49.846	ENSFDAG00000006538	RIF1	67	49.924	Fukomys_damarensis
ENSONIG00000013657	rif1	100	62.856	ENSFHEG00000013721	rif1	99	62.242	Fundulus_heteroclitus
ENSONIG00000013657	rif1	70	65.152	ENSGMOG00000003517	rif1	100	65.152	Gadus_morhua
ENSONIG00000013657	rif1	97	78.072	ENSGAFG00000017196	rif1	92	70.007	Gambusia_affinis
ENSONIG00000013657	rif1	92	79.070	ENSGACG00000008579	rif1	99	58.912	Gasterosteus_aculeatus
ENSONIG00000013657	rif1	68	51.787	ENSGAGG00000012595	RIF1	70	51.903	Gopherus_agassizii
ENSONIG00000013657	rif1	100	91.827	ENSHBUG00000007125	rif1	99	92.950	Haplochromis_burtoni
ENSONIG00000013657	rif1	73	49.962	ENSHGLG00100009807	RIF1	67	50.038	Heterocephalus_glaber_male
ENSONIG00000013657	rif1	100	65.623	ENSHCOG00000015943	rif1	77	65.106	Hippocampus_comes
ENSONIG00000013657	rif1	67	65.696	ENSIPUG00000021703	rif1	64	61.701	Ictalurus_punctatus
ENSONIG00000013657	rif1	70	50.912	ENSSTOG00000020712	RIF1	77	45.989	Ictidomys_tridecemlineatus
ENSONIG00000013657	rif1	100	62.588	ENSKMAG00000002852	rif1	99	62.877	Kryptolebias_marmoratus
ENSONIG00000013657	rif1	99	66.995	ENSLBEG00000023196	rif1	94	70.501	Labrus_bergylta
ENSONIG00000013657	rif1	82	58.678	ENSLOCG00000002657	rif1	85	58.133	Lepisosteus_oculatus
ENSONIG00000013657	rif1	59	50.546	ENSLAFG00000009796	RIF1	52	50.703	Loxodonta_africana
ENSONIG00000013657	rif1	52	51.187	ENSMFAG00000032233	RIF1	51	51.268	Macaca_fascicularis
ENSONIG00000013657	rif1	52	51.187	ENSMMUG00000008611	RIF1	51	51.190	Macaca_mulatta
ENSONIG00000013657	rif1	58	51.179	ENSMNEG00000031616	RIF1	51	51.270	Macaca_nemestrina
ENSONIG00000013657	rif1	58	51.258	ENSMLEG00000042945	RIF1	63	51.349	Mandrillus_leucophaeus
ENSONIG00000013657	rif1	71	69.750	ENSMAMG00000001745	rif1	63	69.754	Mastacembelus_armatus
ENSONIG00000013657	rif1	96	93.375	ENSMZEG00005020920	rif1	99	91.635	Maylandia_zebra
ENSONIG00000013657	rif1	56	64.187	ENSMAUG00000013158	Rif1	52	64.187	Mesocricetus_auratus
ENSONIG00000013657	rif1	62	60.465	ENSMICG00000046127	RIF1	54	60.465	Microcebus_murinus
ENSONIG00000013657	rif1	100	60.841	ENSMMOG00000006519	rif1	99	60.514	Mola_mola
ENSONIG00000013657	rif1	63	49.413	ENSMODG00000003703	RIF1	56	49.668	Monodelphis_domestica
ENSONIG00000013657	rif1	96	69.251	ENSMALG00000016759	rif1	99	68.925	Monopterus_albus
ENSONIG00000013657	rif1	61	49.773	MGP_CAROLIEiJ_G0023555	Rif1	53	49.811	Mus_caroli
ENSONIG00000013657	rif1	61	49.172	ENSMUSG00000036202	Rif1	53	49.473	Mus_musculus
ENSONIG00000013657	rif1	68	47.710	MGP_PahariEiJ_G0025006	Rif1	78	43.967	Mus_pahari
ENSONIG00000013657	rif1	61	49.697	MGP_SPRETEiJ_G0024476	Rif1	63	46.401	Mus_spretus
ENSONIG00000013657	rif1	82	45.767	ENSMPUG00000000371	RIF1	73	45.698	Mustela_putorius_furo
ENSONIG00000013657	rif1	67	47.282	ENSMLUG00000003376	RIF1	72	47.282	Myotis_lucifugus
ENSONIG00000013657	rif1	61	50.038	ENSNGAG00000009268	Rif1	54	50.492	Nannospalax_galili
ENSONIG00000013657	rif1	100	88.027	ENSNBRG00000014257	rif1	99	88.558	Neolamprologus_brichardi
ENSONIG00000013657	rif1	62	45.809	ENSODEG00000003950	RIF1	63	43.011	Octodon_degus
ENSONIG00000013657	rif1	56	55.756	ENSOANG00000006078	-	55	55.756	Ornithorhynchus_anatinus
ENSONIG00000013657	rif1	60	49.581	ENSOCUG00000017435	RIF1	63	44.891	Oryctolagus_cuniculus
ENSONIG00000013657	rif1	100	58.149	ENSORLG00020001302	rif1	99	58.149	Oryzias_latipes_hni
ENSONIG00000013657	rif1	100	58.095	ENSORLG00015000009	rif1	99	57.888	Oryzias_latipes_hsok
ENSONIG00000013657	rif1	100	58.257	ENSOMEG00000021513	rif1	99	57.857	Oryzias_melastigma
ENSONIG00000013657	rif1	61	51.786	ENSOGAG00000006141	RIF1	61	51.786	Otolemur_garnettii
ENSONIG00000013657	rif1	59	50.462	ENSOARG00000008930	RIF1	65	51.786	Ovis_aries
ENSONIG00000013657	rif1	54	50.346	ENSPPAG00000023754	RIF1	75	48.788	Pan_paniscus
ENSONIG00000013657	rif1	63	50.232	ENSPPRG00000003618	RIF1	66	50.313	Panthera_pardus
ENSONIG00000013657	rif1	63	50.232	ENSPTIG00000020652	RIF1	66	50.313	Panthera_tigris_altaica
ENSONIG00000013657	rif1	68	50.423	ENSPTRG00000012534	RIF1	75	49.091	Pan_troglodytes
ENSONIG00000013657	rif1	52	51.347	ENSPANG00000008525	RIF1	51	51.429	Papio_anubis
ENSONIG00000013657	rif1	74	53.884	ENSPKIG00000004267	rif1	68	54.099	Paramormyrops_kingsleyae
ENSONIG00000013657	rif1	80	63.137	ENSPMGG00000016141	rif1	96	61.755	Periophthalmus_magnuspinnatus
ENSONIG00000013657	rif1	59	50.384	ENSPEMG00000000446	Rif1	53	51.008	Peromyscus_maniculatus_bairdii
ENSONIG00000013657	rif1	93	62.759	ENSPFOG00000000554	-	99	62.007	Poecilia_formosa
ENSONIG00000013657	rif1	100	64.511	ENSPFOG00000017804	rif1	99	63.599	Poecilia_formosa
ENSONIG00000013657	rif1	92	73.175	ENSPLAG00000017945	rif1	97	65.706	Poecilia_latipinna
ENSONIG00000013657	rif1	90	62.148	ENSPMEG00000006897	-	99	61.134	Poecilia_mexicana
ENSONIG00000013657	rif1	96	74.247	ENSPREG00000018052	rif1	99	60.260	Poecilia_reticulata
ENSONIG00000013657	rif1	60	50.265	ENSPPYG00000012846	RIF1	65	50.421	Pongo_abelii
ENSONIG00000013657	rif1	62	60.465	ENSPCOG00000027888	RIF1	54	60.465	Propithecus_coquereli
ENSONIG00000013657	rif1	57	60.692	ENSPVAG00000014276	RIF1	57	60.692	Pteropus_vampyrus
ENSONIG00000013657	rif1	99	84.224	ENSPNYG00000012940	rif1	99	84.478	Pundamilia_nyererei
ENSONIG00000013657	rif1	85	62.295	ENSPNAG00000016685	rif1	69	62.295	Pygocentrus_nattereri
ENSONIG00000013657	rif1	60	49.507	ENSRBIG00000003704	RIF1	75	49.091	Rhinopithecus_bieti
ENSONIG00000013657	rif1	60	50.266	ENSRROG00000028206	RIF1	65	50.345	Rhinopithecus_roxellana
ENSONIG00000013657	rif1	59	51.064	ENSSBOG00000029530	RIF1	75	51.064	Saimiri_boliviensis_boliviensis
ENSONIG00000013657	rif1	76	50.115	ENSSHAG00000018552	RIF1	74	50.077	Sarcophilus_harrisii
ENSONIG00000013657	rif1	74	75.000	ENSSFOG00015021539	rif1	84	64.012	Scleropages_formosus
ENSONIG00000013657	rif1	100	78.841	ENSSMAG00000011704	rif1	95	78.841	Scophthalmus_maximus
ENSONIG00000013657	rif1	68	79.070	ENSSDUG00000015632	rif1	66	87.500	Seriola_dumerili
ENSONIG00000013657	rif1	100	69.544	ENSSLDG00000019531	rif1	99	69.302	Seriola_lalandi_dorsalis
ENSONIG00000013657	rif1	70	51.505	ENSSPUG00000003062	RIF1	74	52.393	Sphenodon_punctatus
ENSONIG00000013657	rif1	66	76.967	ENSSPAG00000018359	rif1	99	76.967	Stegastes_partitus
ENSONIG00000013657	rif1	64	49.885	ENSSSCG00000016395	RIF1	75	45.937	Sus_scrofa
ENSONIG00000013657	rif1	51	55.315	ENSTGUG00000016761	RIF1	100	55.396	Taeniopygia_guttata
ENSONIG00000013657	rif1	99	61.006	ENSTRUG00000015808	rif1	99	60.881	Takifugu_rubripes
ENSONIG00000013657	rif1	99	58.668	ENSTNIG00000011538	rif1	88	57.338	Tetraodon_nigroviridis
ENSONIG00000013657	rif1	61	51.724	ENSTBEG00000016082	RIF1	59	51.724	Tupaia_belangeri
ENSONIG00000013657	rif1	55	49.735	ENSTTRG00000011190	RIF1	65	49.735	Tursiops_truncatus
ENSONIG00000013657	rif1	60	47.723	ENSUAMG00000026385	RIF1	63	51.252	Ursus_americanus
ENSONIG00000013657	rif1	71	49.613	ENSUMAG00000000337	RIF1	68	52.549	Ursus_maritimus
ENSONIG00000013657	rif1	62	47.759	ENSVPAG00000002162	RIF1	62	44.296	Vicugna_pacos
ENSONIG00000013657	rif1	67	48.434	ENSVVUG00000011293	RIF1	53	63.415	Vulpes_vulpes
ENSONIG00000013657	rif1	74	46.109	ENSXETG00000004530	rif1	74	47.415	Xenopus_tropicalis
ENSONIG00000013657	rif1	100	58.372	ENSXMAG00000000506	rif1	99	57.908	Xiphophorus_maculatus