EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000013730 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: -
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 5759 bases
Position: chrGL831186.1:2721903-2727661
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000017272	RRM_1	PF00076.22	4.9e-31	1	2
ENSONIP00000017272	RRM_1	PF00076.22	4.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000017287	-	1179	-	ENSONIP00000017272	392 (aa)	-	I3K827

Gene Model

Click here to download ENSONIG00000013730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000013730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000013730	srsf4	69	56.786	ENSONIG00000019583	srsf5a	63	63.243

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000013730	srsf4	62	78.629	ENSATEG00000005680	srsf4	60	88.333	Anabas_testudineus
ENSONIG00000013730	srsf4	100	89.031	ENSACLG00000003395	srsf4	100	89.031	Astatotilapia_calliptera
ENSONIG00000013730	srsf4	52	85.854	ENSAMXG00000034811	srsf4	69	91.429	Astyanax_mexicanus
ENSONIG00000013730	srsf4	65	94.203	ENSCSEG00000010058	srsf4	75	89.344	Cynoglossus_semilaevis
ENSONIG00000013730	srsf4	69	66.995	ENSCVAG00000004342	srsf4	75	60.000	Cyprinodon_variegatus
ENSONIG00000013730	srsf4	99	62.148	ENSDARG00000105293	srsf4	66	94.286	Danio_rerio
ENSONIG00000013730	srsf4	83	77.370	ENSFHEG00000007472	srsf4	88	97.561	Fundulus_heteroclitus
ENSONIG00000013730	srsf4	60	69.048	ENSGAFG00000018496	srsf4	65	84.444	Gambusia_affinis
ENSONIG00000013730	srsf4	78	99.349	ENSHBUG00000016905	srsf4	93	99.349	Haplochromis_burtoni
ENSONIG00000013730	srsf4	70	98.485	ENSHCOG00000012540	srsf4	68	89.674	Hippocampus_comes
ENSONIG00000013730	srsf4	83	71.429	ENSKMAG00000013631	srsf4	81	81.159	Kryptolebias_marmoratus
ENSONIG00000013730	srsf4	83	81.651	ENSMAMG00000004888	srsf4	87	75.841	Mastacembelus_armatus
ENSONIG00000013730	srsf4	100	89.031	ENSMZEG00005026275	srsf4	100	89.031	Maylandia_zebra
ENSONIG00000013730	srsf4	83	80.428	ENSMMOG00000013653	srsf4	85	74.618	Mola_mola
ENSONIG00000013730	srsf4	83	95.531	ENSMALG00000013392	srsf4	66	92.737	Monopterus_albus
ENSONIG00000013730	srsf4	78	98.697	ENSNBRG00000014848	srsf4	93	98.697	Neolamprologus_brichardi
ENSONIG00000013730	srsf4	65	94.203	ENSORLG00015007566	srsf4	71	92.179	Oryzias_latipes_hsok
ENSONIG00000013730	srsf4	70	98.507	ENSPLAG00000008812	srsf4	64	82.967	Poecilia_latipinna
ENSONIG00000013730	srsf4	77	98.507	ENSPMEG00000023638	srsf4	53	90.659	Poecilia_mexicana
ENSONIG00000013730	srsf4	77	98.507	ENSPREG00000009639	srsf4	50	91.620	Poecilia_reticulata
ENSONIG00000013730	srsf4	67	93.889	ENSSDUG00000007387	srsf4	54	92.737	Seriola_dumerili
ENSONIG00000013730	srsf4	67	60.985	ENSSLDG00000009745	srsf4	61	76.667	Seriola_lalandi_dorsalis
ENSONIG00000013730	srsf4	84	94.203	ENSSPAG00000014538	srsf4	74	97.531	Stegastes_partitus
ENSONIG00000013730	srsf4	93	73.626	ENSXCOG00000018826	srsf4	89	87.288	Xiphophorus_couchianus